GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002024-TA|BGIBMGA002024-
PA|IPR003659|Plexin/semaphorin/integrin, IPR002165|Plexin
         (442 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457553-1|AAL68783.1|  178|Anopheles gambiae mucin-like protein...    26   1.8  
DQ370048-1|ABD18609.1|  144|Anopheles gambiae putative secreted ...    25   5.4  
AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    25   5.4  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    24   9.5  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   9.5  

>AF457553-1|AAL68783.1|  178|Anopheles gambiae mucin-like protein
           protein.
          Length = 178

 Score = 26.2 bits (55), Expect = 1.8
 Identities = 13/52 (25%), Positives = 22/52 (42%)

Query: 324 NASALTNATTCPATQSDXXXXXXXXXXXXKPDNQSTTAADAVDHAKSRVQIS 375
           +A+  T ATT  AT S+               + +TT A+A    +++   S
Sbjct: 68  SAATTTAATTSAATTSEATTTAAASTTQASDSDNTTTTAEATTTTEAQTTSS 119


>DQ370048-1|ABD18609.1|  144|Anopheles gambiae putative secreted
           polypeptide protein.
          Length = 144

 Score = 24.6 bits (51), Expect = 5.4
 Identities = 10/24 (41%), Positives = 17/24 (70%), Gaps = 1/24 (4%)

Query: 218 NIPIDVNTIKNTSHPVKVGISDAY 241
           +IP+DV+T+  T HP    +S++Y
Sbjct: 29  HIPVDVSTLTTTLHPCN-RLSNSY 51


>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 24.6 bits (51), Expect = 5.4
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 40  EPIDPDPDYDMRDISNFTPDKIKAEHNITDLTIDNH 75
           E I P P+YDM +IS   P+ I      +D+T +++
Sbjct: 194 ESIVPHPEYDMHNISR--PNDICILRLASDVTFNDY 227


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.8 bits (49), Expect = 9.5
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 275 TALPTCIQFSTCDECLNHDTTFNCT 299
           T L T I   TC++C +HD     T
Sbjct: 512 TGLVTQIVRDTCEDCWDHDAEARLT 536


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.8 bits (49), Expect = 9.5
 Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 279 TCIQFSTCDECLNHDTTFNCTWCSRLQKCSSGTDRNKQSWEIKQCNASALTNATTC 334
           TC +  TC   +  D  +   +C +   C+   +  K   + +Q     L  A  C
Sbjct: 650 TC-ECGTCRCTVTEDGRYTGRYCEKCPTCAGRCNEFKHCVQCQQYKTGPLAEANEC 704


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.132    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 479,064
Number of Sequences: 2123
Number of extensions: 19946
Number of successful extensions: 103
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 100
Number of HSP's gapped (non-prelim): 5
length of query: 442
length of database: 516,269
effective HSP length: 66
effective length of query: 376
effective length of database: 376,151
effective search space: 141432776
effective search space used: 141432776
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)