GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002023-TA|BGIBMGA002023-PA|IPR007114|Major facilitator
superfamily, IPR003663|Sugar transporter, IPR000803|Facilitated
glucose transporter, IPR005828|General substrate transporter
         (574 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    26   0.82 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    24   2.5  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    24   3.3  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 25.8 bits (54), Expect = 0.82
 Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 2/83 (2%)

Query: 130 INAPSKNIANFMKDVYKKRYGIDLHDGTVNSLFSIAVSIFAIGGMLGGF--SGLNTSLVP 187
           +N     IA    + ++    ++  D   NS+ S+  +IF   G LG F  +  +  L+ 
Sbjct: 145 LNLKGNKIATIAYETFQNLPELEDLDLAYNSISSLDFNIFDQVGSLGMFHVNMSHNKLIN 204

Query: 188 MYISEIAPLNLRGGLGTVNQLAV 210
           + ++   P     GLG +  + V
Sbjct: 205 LVVAPSVPFEQDTGLGGLQNIKV 227


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 7/18 (38%), Positives = 15/18 (83%)

Query: 63  VQQVKEEIEELREYVDRL 80
           V Q+K+++E+L+ + DR+
Sbjct: 298 VDQIKQDVEDLKRWSDRI 315


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 441 ELFSQGPRPSAMAIAVLVNWMANFVVGI 468
           E+FS   R     +  LVNW    ++GI
Sbjct: 73  EVFSAWVRCQDQILIFLVNWYPRLIIGI 100


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.137    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,448
Number of Sequences: 317
Number of extensions: 3693
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 3
length of query: 574
length of database: 114,650
effective HSP length: 60
effective length of query: 514
effective length of database: 95,630
effective search space: 49153820
effective search space used: 49153820
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)