Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002023-TA|BGIBMGA002023-PA|IPR007114|Major facilitator
superfamily, IPR003663|Sugar transporter, IPR000803|Facilitated
glucose transporter, IPR005828|General substrate transporter
(574 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0) 107 2e-23
SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0) 97 3e-20
SB_16059| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 4e-17
SB_7879| Best HMM Match : Sugar_tr (HMM E-Value=0.03) 65 2e-10
SB_47688| Best HMM Match : ATP_synt_H (HMM E-Value=7) 58 3e-08
SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28) 56 6e-08
SB_24873| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 8e-08
SB_19714| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 4e-04
SB_3451| Best HMM Match : HOK_GEF (HMM E-Value=9.4) 33 0.62
SB_57349| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.62
SB_51400| Best HMM Match : Kinesin (HMM E-Value=0) 32 1.1
SB_6447| Best HMM Match : DUF164 (HMM E-Value=0.48) 32 1.4
SB_16794| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 31 3.3
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.3
SB_10566| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.3
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.4
SB_21556| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.4
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 30 4.4
SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07) 30 5.8
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.8
SB_17728| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0032) 30 5.8
SB_38875| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.7
SB_21989| Best HMM Match : Spectrin (HMM E-Value=0) 29 7.7
SB_21059| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.7
SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.7
>SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0)
Length = 512
Score = 107 bits (257), Expect = 2e-23
Identities = 104/369 (28%), Positives = 159/369 (43%), Gaps = 31/369 (8%)
Query: 171 IGGMLGGFS-GLNTSLVPMYISEIAPLNLRGGLGTVNQLAVTVGLLISQVLGIEQILGTD 229
IG + G + G+ + VP+YI+EI+ +LRG LG+VNQLAVT+GLL++ +G+ +L
Sbjct: 143 IGRFITGLAVGMVSLTVPVYIAEISSPSLRGMLGSVNQLAVTMGLLLAYSMGV--VLKWR 200
Query: 230 EGWPILLGLAICPAILQLLLLPACPESPRYLLITRQWXXXXXXXXXXXXXSNQVXXXXXX 289
W G AI PA+L +L+ PE+PR+ L ++ V
Sbjct: 201 --WLACSG-AIFPALLVVLMF-FVPETPRWSLSHKRRRDALDAMMWFRGPEADVEEECYR 256
Query: 290 XXXXXXXXXXXXSISMRELLCSPTLRAPLLIGVVMQLSQQLSGINAVFYYSTSLFTSSGL 349
S+S E C P + PL I + + QQ GINA+ + S S+F +G
Sbjct: 257 IEATMDNTQ---SMSCAEF-CRPAIMKPLFISIALMFFQQFCGINAILFNSASIFHQAGF 312
Query: 350 TEESA--------KFATMGIGAVMVGMTLVSLPLMDRTGRRTLHLYGLGG-----MXXXX 396
+ A +F GI ++V L L T+ L LG +
Sbjct: 313 QDSKAVSVIIGAVQFVGTGIACLVVDKAGRKLLLWTTALGMTVSLIALGFYFELYIPTTQ 372
Query: 397 XXXXXXXLIKEMIDW------MSYLXXXXXXXXXXXXXXGPGSIPWLITAELFSQGPRPS 450
+ E I +S+L G +PWL+ +E+F R
Sbjct: 373 EQPTPTPALLESIHHSIPAGKISWLAITSIVVFNLVFALAWGPVPWLVMSEIFPLQARGI 432
Query: 451 AMAIAVLVNWMANFVVGIGFPSMK-ALLENYTFLPFSAFLAIFWIFTYKKVPETKNKTFE 509
A +I+ L NW F V F +++ A+ T+ + + ++F VPETK KT E
Sbjct: 433 ASSISTLCNWSLAFAVTKTFVNIEDAITIQGTYWFYGGLSFLGFLFVLMFVPETKGKTLE 492
Query: 510 EILALFRNT 518
+I LF T
Sbjct: 493 QIERLFDGT 501
>SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0)
Length = 493
Score = 97.1 bits (231), Expect = 3e-20
Identities = 68/238 (28%), Positives = 106/238 (44%), Gaps = 5/238 (2%)
Query: 156 GTVNSLFSIAVSIFAIGGMLGGFSGLNTSLVPMYISEIAPLNLRGGLGTVNQLAVTVGLL 215
G + + V IG +GG S VP+Y++E AP ++RG L T+N L +T G
Sbjct: 135 GVAGTKHVLLVGRLVIGLGIGGAS----MTVPIYVAEAAPSSMRGKLVTLNNLFITGGQF 190
Query: 216 ISQVLGIEQILGTDEGWPILLGLAICPAILQLLLLPACPESPRYLLITRQWXXXXXXXXX 275
I+ V+ GW +LGLA P+I+ PESPR+L+ ++
Sbjct: 191 IASVVDGIFAYDRQNGWRFMLGLAAVPSIIMFFGCVILPESPRWLISKCKYAEARAALCK 250
Query: 276 XXXXSNQVXXXXXXXXXXXXXXXXXXSISMRELLCSPTLRAPLLIGVVMQLSQQLSGINA 335
++ + +L P R LL+G ++Q QQL GIN
Sbjct: 251 IRGRTDVDRELEAVRRTCKVERKERSGQVLIRILRFPNTRRALLVGCMLQAIQQLCGINT 310
Query: 336 VFYYSTSLFTSSGL-TEESAKFATMGIGAVMVGMTLVSLPLMDRTGRRTLHLYGLGGM 392
V YYS ++ SG+ +++ + I T+V + L++R GRR L L L G+
Sbjct: 311 VMYYSATIILMSGIGNSKTSIWLAAAIAFGNTLFTIVGIFLVERIGRRKLLLGSLAGV 368
>SB_16059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 87.0 bits (206), Expect = 4e-17
Identities = 61/164 (37%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 106 TFFLSYAILAAVLGM-LQFGYNTGVINAPSKNIANFMKDVYKKRYGIDLHDGTVNSLFSI 164
T +L YA AVLG QFGYN+ IN+P ++I + K +K D +SI
Sbjct: 21 TGWLIYATAVAVLGSSFQFGYNSACINSPVEDIKKYFKTQHKPLATYD---------WSI 71
Query: 165 AVSIFAIGGMLGGFSGLNTSLV---PMYISEIAPLNLRGGLG-TVNQLAVTVGLLISQVL 220
V IF GGMLG G S + + + +N R G + N+ TV + +Q
Sbjct: 72 IVGIFPFGGMLGALVGPTLSNIIGREGFADKRNRINKRLLQGPSYNKSRCTVAFVKTQRC 131
Query: 221 GIEQILGTDEGWPILLGLAICPAILQLLLLPACPESPRYLLITR 264
++LG+ WP L+G +I PAI+Q++ LP CP SPRYLL+ R
Sbjct: 132 ---KVLGSGSKWPWLIGFSIVPAIIQMMTLPFCPRSPRYLLLKR 172
>SB_7879| Best HMM Match : Sugar_tr (HMM E-Value=0.03)
Length = 201
Score = 64.9 bits (151), Expect = 2e-10
Identities = 27/68 (39%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 160 SLFSIAVSIFAIGGMLGGFS-GLNTSLVPMYISEIAPLNLRGGLGTVNQLAVTVGLLISQ 218
S F+ + +G + G + G+NT++ P+Y+SE+AP++LRG LGT+NQ + GLL+
Sbjct: 37 SYFAKTSPLLTVGRFVIGINCGMNTAIAPIYLSELAPIHLRGSLGTLNQFGIVSGLLVGF 96
Query: 219 VLGIEQIL 226
+ G++Q+L
Sbjct: 97 IFGLKQVL 104
Score = 52.8 bits (121), Expect = 7e-07
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 465 VVGIGFPSMKALLENYTFLPFSAFLAIFWIFTYKKVPETKNKTFEEILALFR 516
VV + F ++ L YTF+ F A +AIFW FT+ VPETK +T E+I FR
Sbjct: 128 VVALVFTAIAVALYPYTFIVFMALVAIFWTFTFFFVPETKGRTIEDITDHFR 179
Score = 36.7 bits (81), Expect = 0.051
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 332 GINAVFYYSTSLFTSSGLTEESAKFATMGIGAVMVGMTLVSLPLMDRT 379
G+ V YYSTS+F G+ E ++ AT GIG V + T +++ L T
Sbjct: 99 GLKQVLYYSTSIFEKVGVPE--SRVATTGIGVVALVFTAIAVALYPYT 144
>SB_47688| Best HMM Match : ATP_synt_H (HMM E-Value=7)
Length = 124
Score = 57.6 bits (133), Expect = 3e-08
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 436 WLITAELFSQGPRPSAMAIAVLVNWMANFVVGIGFPSMKALL-ENYTFLPFSAFLAIFWI 494
WL+ +E+F G + A ++A ++NW N V F + + + TF + I +
Sbjct: 3 WLLLSEIFPSGIKGRAFSLATVLNWGTNVFVSFTFLDLLGSIGTSGTFFFYGLICVIAIV 62
Query: 495 FTYKKVPETKNKTFEEILA 513
F YK VPETKNKT E+I A
Sbjct: 63 FIYKYVPETKNKTLEQISA 81
>SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28)
Length = 456
Score = 56.4 bits (130), Expect = 6e-08
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 9/95 (9%)
Query: 171 IGGMLGGFSGLNTSLVPMYISEIAPLNLRGGLGTVNQLAVTVGLLISQVLGIEQILGTDE 230
+ G+ G + LN VP+YISE A + RG +G++NQL +T G+LIS +G D
Sbjct: 143 MSGLGVGMASLN---VPVYISETASFSNRGAMGSINQLGITAGILISYAIG----YAFDW 195
Query: 231 GWPILLGLAICPAILQLLLLPACPESPRYLLITRQ 265
W + G PA L ++L+ PE+ R+L+ ++
Sbjct: 196 RWSAVAG--SFPAALLVVLMAFMPETARWLIAKKK 228
Score = 53.2 bits (122), Expect = 5e-07
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 311 SPTLRAPLLIGVVMQLSQQLSGINAVFYYSTSLFTSSGLTEESAKFATMGIGAVMVGMTL 370
+P+L P LI + + QQ SGINA +Y ++F +G + + + IGAV +
Sbjct: 335 NPSLLRPFLISMSLHFFQQFSGINAFMFYCATIFQKAGFKDPTG--VPILIGAVQFVASA 392
Query: 371 VSLPLMDRTGRRTLHLYGLGGM 392
+SL L+DR GRR L + GM
Sbjct: 393 ISLALIDRGGRRFLLIVAGVGM 414
>SB_24873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 56.0 bits (129), Expect = 8e-08
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 225 ILGTDEGWPILLGLAICPAILQLLLLPACPESPRYLLITR 264
+LG+ WP L+G +I PAI+Q++ LP CP SPRYLL+ R
Sbjct: 1 VLGSGSKWPWLIGFSIVPAIIQMMTLPFCPRSPRYLLLKR 40
>SB_19714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 43.6 bits (98), Expect = 4e-04
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 477 LENYTFLPFSAFLAIFWIFTYKKVPETKNKTFEEILALFR 516
L+ YTF+ F + FW+FTY VPETK ++ ++I FR
Sbjct: 3 LDPYTFIVFLVLVLGFWLFTYFLVPETKGRSIDDITRQFR 42
>SB_3451| Best HMM Match : HOK_GEF (HMM E-Value=9.4)
Length = 173
Score = 33.1 bits (72), Expect = 0.62
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 50 KRDMVAIKQELDTVQQVKEEIEELREYVDRLEEHTQRRKLR 90
+R+ V I + LDT+ Q++E IEELR+ D + R LR
Sbjct: 125 RRNCVVISRTLDTLGQLRERIEELRKLQDSGSVDSTLRHLR 165
>SB_57349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 33.1 bits (72), Expect = 0.62
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 232 WPILLGLAICPAILQLLLLPACPESPRYLLI 262
W L +++ P L L + A P+SPRYLL+
Sbjct: 145 WQTLTRISVAPMFLFLFFVKAYPDSPRYLLV 175
>SB_51400| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 455
Score = 32.3 bits (70), Expect = 1.1
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 59 ELDTVQQVKEEIEELREYVDRLEEHTQRRKLRLLEQARTFCS 100
EL ++Q+KE + R+ V+ +EE + R + LEQ R+ S
Sbjct: 413 ELVNMRQIKETFAQFRKIVNSMEEEVEERVKQNLEQERSVAS 454
>SB_6447| Best HMM Match : DUF164 (HMM E-Value=0.48)
Length = 598
Score = 31.9 bits (69), Expect = 1.4
Identities = 14/40 (35%), Positives = 27/40 (67%)
Query: 57 KQELDTVQQVKEEIEELREYVDRLEEHTQRRKLRLLEQAR 96
KQEL+ ++ K+ IE+ RE +D L + + ++ RLL +++
Sbjct: 398 KQELELEERKKQAIEQDREDLDTLSQELEAKRERLLNKSK 437
>SB_16794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1407
Score = 31.5 bits (68), Expect = 1.9
Identities = 20/91 (21%), Positives = 43/91 (47%)
Query: 5 LSAKLDELQRGDRQLETTVALCEIRTQLQELTKXXXXXXXXXXXXKRDMVAIKQELDTVQ 64
L L+E+++ Q E VA L+ + +R+ A++Q+LD +
Sbjct: 569 LKNSLEEVKQLAAQYEQEVAAESQGEDLELMDSQLEEYNRLKEEARRETAAVRQQLDRIN 628
Query: 65 QVKEEIEELREYVDRLEEHTQRRKLRLLEQA 95
+ ++ +EL + V + + + R+ +L EQ+
Sbjct: 629 REQQSDQELLDGVKQTKTDLKTRQKQLQEQS 659
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 30.7 bits (66), Expect = 3.3
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 15 GDRQLETTVALCEIRTQLQELTKXXXXXXXXXXXXKRDMVAIKQELDTVQQVKE-EIEEL 73
G ET + CE ++Q+L +++++ + E+++ Q+ E E+EEL
Sbjct: 76 GSGNTETHIKECE--REIQKLRNTIEDKNYHINKLQKNLLRTQMEMESEQEKHESELEEL 133
Query: 74 REYVDRLE 81
R +D+LE
Sbjct: 134 RAQLDKLE 141
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 30.7 bits (66), Expect = 3.3
Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 5 LSAKLDELQRGDRQLETTVALCEIRTQL-QELTKXXXXXXXXXXXXKRDMVAIKQELDTV 63
L+A+++ELQ + E L ++ TQL EL + +D+ A+K +L++V
Sbjct: 5255 LNARVNELQAINEFEEDYARLAKLNTQLVTELDRCNEEF--------KDLDALKNDLESV 5306
Query: 64 QQVKEEIEELREYVDRLEEHTQRRKLRLLEQART 97
+ +++++ E + LEE + +L +A+T
Sbjct: 5307 ELLEKKLAETNNQFEDLEERSSEISEKLPVEAQT 5340
>SB_10566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1264
Score = 30.7 bits (66), Expect = 3.3
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 20 ETTVALCEIRTQLQELTKXXXXXXXXXXXXKRDMVAIKQELDTVQQVKEEIEELREYVDR 79
ET + E + +QE K KR++ K++ VQ+ K+E++E + VD
Sbjct: 201 ETKKEVQETKKDVQETKKEVHETKTKVDETKREVQETKKD---VQETKKEVQETKTKVDE 257
Query: 80 LEEHTQRRKLRLLE 93
+ Q K + E
Sbjct: 258 TNKEVQETKKEVHE 271
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 30.3 bits (65), Expect = 4.4
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 20 ETTVALCEIRTQLQELTKXXXXXXXXXXXXKRDMVAIKQELDTVQQVKEEIEELREYVDR 79
ET + E + +QE K K+++ K++ VQ+ K+E++E + VD
Sbjct: 1295 ETKKEVQETKKDVQETKKEVDETKTKVDETKKEVQETKKD---VQETKKEVQETKTKVDE 1351
Query: 80 LEEHTQRRKLRLLE 93
+ Q K + E
Sbjct: 1352 TNKEVQETKKEIQE 1365
>SB_21556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 30.3 bits (65), Expect = 4.4
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 50 KRDMVAIKQELDTVQQVKEEIEELREYVDRLEEHTQRRKLRLLEQARTFCSHPQGLTFF 108
K M A K +LD +++E + LR +D LE++ +R +R+ A + + + L FF
Sbjct: 4 KDQMAASKAKLD---EIEEANDTLRNQMDDLEQYNRRMNVRIYGIAESEDTDAKALDFF 59
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 30.3 bits (65), Expect = 4.4
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 8 KLDELQRGDRQLETTVALCEIRTQLQELTKXXXXXXXXXXXXKRDMVAIKQELDTVQQVK 67
K +L+ R+LE A E++ + QEL + +R++ I+QE + +++
Sbjct: 564 KAQKLEEEQRELERLQAEAELKRK-QELERLREKRKEEKAQREREL--IEQEKNRAREIY 620
Query: 68 EEIEELREYVDRLEEHTQRR 87
++ +RE V + E QR+
Sbjct: 621 ISLKRVREQVKQKEAEEQRK 640
>SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07)
Length = 1128
Score = 29.9 bits (64), Expect = 5.8
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 23 VALCEIRTQLQELTKXXXXXXXXXXXXKRDMVAIKQELDTVQQVKEEIEELREYVDRLEE 82
+AL + + +L+E + K+++ +K +L ++ K E EELR+ + R E
Sbjct: 470 MALQKYKAELEEANQLLKKDASEIELLKQEIAQLKGDLCRAEESKAEREELRQQIARARE 529
>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2916
Score = 29.9 bits (64), Expect = 5.8
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 52 DMVAIKQELDTVQQVKEEIEELREYVDRLEEHTQRRKLRL 91
D+ A+K+EL+ + IEELR+ +DR E+ +++ L
Sbjct: 180 DVAALKEELELAHKT---IEELRQQLDRTVEYAKKKSCEL 216
>SB_17728| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0032)
Length = 1293
Score = 29.9 bits (64), Expect = 5.8
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 52 DMVAIKQELDTVQQVKEEIEELREYVDRLEEHTQRRKLRL 91
D+ A+K+EL+ + IEELR+ +DR E+ +++ L
Sbjct: 128 DVAALKEELELAHKT---IEELRQQLDRTVEYAKKKSCEL 164
>SB_38875| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1116
Score = 29.5 bits (63), Expect = 7.7
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 166 VSIFAIGGMLGGFSGLNTSLVPMYISEIAPLNLRGGLGTVNQLAVTVGLLISQVLGIEQI 225
VS + G+ G F L LV +Y S++ P L L + L + LL+ QVLG + +
Sbjct: 319 VSRLIVTGVYGAFYLL---LVVLYASKLYPARLMKCLPYLVWLGIFSQLLVDQVLGYDPL 375
Query: 226 LGTDEGWPILLGLAICPAILQLLLLPA 252
+D +G+ + + ++LPA
Sbjct: 376 TPSDS-----VGMFAFFSFISYVMLPA 397
>SB_21989| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1805
Score = 29.5 bits (63), Expect = 7.7
Identities = 11/32 (34%), Positives = 22/32 (68%)
Query: 57 KQELDTVQQVKEEIEELREYVDRLEEHTQRRK 88
KQ+L+T +++ +E+E ++ +D+L H Q K
Sbjct: 549 KQQLETYRRISKELEYKQQGLDKLSAHVQEIK 580
>SB_21059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1024
Score = 29.5 bits (63), Expect = 7.7
Identities = 12/42 (28%), Positives = 25/42 (59%)
Query: 306 RELLCSPTLRAPLLIGVVMQLSQQLSGINAVFYYSTSLFTSS 347
RE++C P R P L+ + ++ ++GI ++ T++ T+S
Sbjct: 387 REVVCEPLYRVPKLLNTMSDVTFLVTGIVSIIVSITAITTNS 428
>SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 29.5 bits (63), Expect = 7.7
Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 114 LAAVLGMLQFGYN--TGVINAPSKNIANFMKDVYKKRYGIDLHDG 156
+ V+ ++++ Y G +N P+K A+F V+ K+ G + G
Sbjct: 377 IVVVVAVVKYNYRYCQGTVNKPAKTAADFFNQVHDKQSGASIFGG 421
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.137 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,455,680
Number of Sequences: 59808
Number of extensions: 502178
Number of successful extensions: 1735
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1679
Number of HSP's gapped (non-prelim): 55
length of query: 574
length of database: 16,821,457
effective HSP length: 86
effective length of query: 488
effective length of database: 11,677,969
effective search space: 5698848872
effective search space used: 5698848872
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 63 (29.5 bits)
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