GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002023-TA|BGIBMGA002023-PA|IPR007114|Major facilitator
superfamily, IPR003663|Sugar transporter, IPR000803|Facilitated
glucose transporter, IPR005828|General substrate transporter
         (574 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    28   0.59 
AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding pr...    27   1.0  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    26   2.4  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    26   3.1  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   5.5  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   9.5  

>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 28.3 bits (60), Expect = 0.59
 Identities = 17/56 (30%), Positives = 35/56 (62%), Gaps = 7/56 (12%)

Query: 51  RDMVAIKQE--LDTVQQVKEEIEELREYVDRLEEHTQRRKLRLLEQARTFCSHPQG 104
           RD  A +Q+   DT++  KE ++ ++     L+  + +RKLRL++QA+++ +  +G
Sbjct: 41  RDESAGRQDKLFDTIRLHKEVLQTVK-----LQPISMKRKLRLVQQAKSYITRHEG 91


>AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding
           protein AgamOBP33 protein.
          Length = 334

 Score = 27.5 bits (58), Expect = 1.0
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 171 IGGMLGGFSGLNTSLVPMYISEIAPLNLRGGLGTVNQLAVTVGLL 215
           +GG++GG +GL T LVP    ++    L     T++  +V VG L
Sbjct: 272 LGGLVGGLTGL-TGLVPPVTLQLTSPGLAAVTLTLSAPSVMVGAL 315


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 26.2 bits (55), Expect = 2.4
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 2/29 (6%)

Query: 56  IKQEL--DTVQQVKEEIEELREYVDRLEE 82
           +KQ L   + QQ KEEIEEL + ++ L++
Sbjct: 727 LKQRLAQTSFQQTKEEIEELNKKIETLQK 755


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
          protein.
          Length = 429

 Score = 25.8 bits (54), Expect = 3.1
 Identities = 9/31 (29%), Positives = 22/31 (70%)

Query: 64 QQVKEEIEELREYVDRLEEHTQRRKLRLLEQ 94
          +++ EE+ ++R  + + +E+T+RR+L   E+
Sbjct: 20 ERINEELTQMRILMTKQQEYTERRELIAREE 50


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.0 bits (52), Expect = 5.5
 Identities = 9/24 (37%), Positives = 18/24 (75%)

Query: 50  KRDMVAIKQELDTVQQVKEEIEEL 73
           K D ++ +QEL+ +++ KEE +E+
Sbjct: 249 KEDQISKQQELNIIEKRKEEADEV 272


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.2 bits (50), Expect = 9.5
 Identities = 10/30 (33%), Positives = 18/30 (60%)

Query: 64  QQVKEEIEELREYVDRLEEHTQRRKLRLLE 93
           Q+  +EI  L E  +RLE+   ++K  L++
Sbjct: 290 QRSTDEINSLEEKTERLEDTISKQKRELMD 319


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.137    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 456,549
Number of Sequences: 2123
Number of extensions: 16772
Number of successful extensions: 36
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 29
Number of HSP's gapped (non-prelim): 8
length of query: 574
length of database: 516,269
effective HSP length: 68
effective length of query: 506
effective length of database: 371,905
effective search space: 188183930
effective search space used: 188183930
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 50 (24.2 bits)