GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002022-TA|BGIBMGA002022-PA|undefined
         (136 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024186-1|ABC86248.1| 1167|Drosophila melanogaster SD10794p pro...    30   0.93 
AE014297-168|ABI31137.1| 1167|Drosophila melanogaster CG31536-PE...    30   0.93 
AY051563-1|AAK92987.1|  634|Drosophila melanogaster GH21160p pro...    29   1.6  
AE013599-1301|AAM68737.1|  634|Drosophila melanogaster CG30023-P...    29   1.6  
Z11743-1|CAA77802.1| 1403|Drosophila melanogaster prospero protein.    29   2.1  
D10609-1|BAA01464.1| 1403|Drosophila melanogaster prospero protein.    29   2.1  
BT015263-1|AAT94492.1| 1374|Drosophila melanogaster LD37627p pro...    29   2.1  
AY060832-1|AAL28380.1|  313|Drosophila melanogaster GM01605p pro...    29   2.1  
AY060680-1|AAL28228.1|  598|Drosophila melanogaster GH11848p pro...    29   2.1  
AF190403-1|AAF05703.1| 1403|Drosophila melanogaster homeodomain ...    29   2.1  
AE014298-1345|AAF46506.3|  452|Drosophila melanogaster CG32699-P...    29   2.1  
AE014298-1344|ABI30972.1|  533|Drosophila melanogaster CG32699-P...    29   2.1  
AE014297-1287|AAN13500.2| 1374|Drosophila melanogaster CG17228-P...    29   2.1  
AE014297-1286|AAF54628.2| 1403|Drosophila melanogaster CG17228-P...    29   2.1  
AE014297-1285|AAN13501.2| 1535|Drosophila melanogaster CG17228-P...    29   2.1  
AY061023-1|AAL28571.1|  567|Drosophila melanogaster HL04910p pro...    29   2.8  
AE013599-1304|AAM68738.1|  567|Drosophila melanogaster CG7759-PB...    29   2.8  
AE013599-1303|AAF58645.2|  660|Drosophila melanogaster CG7759-PA...    29   2.8  
M81389-1|AAA28841.1| 1407|Drosophila melanogaster Pros protein p...    28   3.7  
BT003594-1|AAO39597.1|  533|Drosophila melanogaster HL01250p pro...    28   3.7  
BT021475-1|AAX33623.1|  379|Drosophila melanogaster AT02876p pro...    27   6.5  
AY061222-1|AAL28770.1|  305|Drosophila melanogaster LD16544p pro...    27   6.5  
AE014298-1472|AAF46607.2|  459|Drosophila melanogaster CG1628-PB...    27   6.5  
AE014297-3578|ABI31205.1| 1728|Drosophila melanogaster CG34100-P...    27   8.6  
AE014297-3577|AAN14004.2| 1918|Drosophila melanogaster CG34100-P...    27   8.6  

>BT024186-1|ABC86248.1| 1167|Drosophila melanogaster SD10794p
           protein.
          Length = 1167

 Score = 30.3 bits (65), Expect = 0.93
 Identities = 15/31 (48%), Positives = 19/31 (61%)

Query: 77  GKTQKVTIDRVKPAYVAREDLNASQSRIQSP 107
           GKTQK  I+ V+  YV R++   SQS  Q P
Sbjct: 376 GKTQKQIIEFVRENYVKRQNFQRSQSFRQGP 406


>AE014297-168|ABI31137.1| 1167|Drosophila melanogaster CG31536-PE,
           isoform E protein.
          Length = 1167

 Score = 30.3 bits (65), Expect = 0.93
 Identities = 15/31 (48%), Positives = 19/31 (61%)

Query: 77  GKTQKVTIDRVKPAYVAREDLNASQSRIQSP 107
           GKTQK  I+ V+  YV R++   SQS  Q P
Sbjct: 376 GKTQKQIIEFVRENYVKRQNFQRSQSFRQGP 406


>AY051563-1|AAK92987.1|  634|Drosophila melanogaster GH21160p
           protein.
          Length = 634

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 17/62 (27%), Positives = 29/62 (46%)

Query: 66  RDEKTVDIEVQGKTQKVTIDRVKPAYVAREDLNASQSRIQSPNPVIRVPCAKNVKPRPLQ 125
           R  K++D + + +++  T  R       ++ L  S  R QS   V   PCA   + RP++
Sbjct: 533 RSVKSLDFDSENESKPATETRTTRPTPPKKPLRLSLQRAQSLQTVELHPCADIERKRPMK 592

Query: 126 HV 127
            V
Sbjct: 593 RV 594


>AE013599-1301|AAM68737.1|  634|Drosophila melanogaster CG30023-PA
           protein.
          Length = 634

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 17/62 (27%), Positives = 29/62 (46%)

Query: 66  RDEKTVDIEVQGKTQKVTIDRVKPAYVAREDLNASQSRIQSPNPVIRVPCAKNVKPRPLQ 125
           R  K++D + + +++  T  R       ++ L  S  R QS   V   PCA   + RP++
Sbjct: 533 RSVKSLDFDSENESKPATETRTTRPTPPKKPLRLSLQRAQSLQTVELHPCADIERKRPMK 592

Query: 126 HV 127
            V
Sbjct: 593 RV 594


>Z11743-1|CAA77802.1| 1403|Drosophila melanogaster prospero protein.
          Length = 1403

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 17/72 (23%), Positives = 34/72 (47%)

Query: 23   YTSSSRPFYVPKDLRTATHVFLRQGPARRSLQAPYLGPYKVLRRDEKTVDIEVQGKTQKV 82
            Y S + PF +P D +       +Q  A++  Q+      ++ + +  ++ +  + K  KV
Sbjct: 939  YNSMTGPFCLPPDQQQQQQTAQQQQSAQQQQQSSQQTQQQLEQNEALSLVVTPKKKRHKV 998

Query: 83   TIDRVKPAYVAR 94
            T  R+ P  V+R
Sbjct: 999  TDTRITPRTVSR 1010


>D10609-1|BAA01464.1| 1403|Drosophila melanogaster prospero protein.
          Length = 1403

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 17/72 (23%), Positives = 34/72 (47%)

Query: 23   YTSSSRPFYVPKDLRTATHVFLRQGPARRSLQAPYLGPYKVLRRDEKTVDIEVQGKTQKV 82
            Y S + PF +P D +       +Q  A++  Q+      ++ + +  ++ +  + K  KV
Sbjct: 939  YNSMTGPFCLPPDQQQQQQTAQQQQSAQQQQQSSQQTQQQLEQNEALSLVVTPKKKRHKV 998

Query: 83   TIDRVKPAYVAR 94
            T  R+ P  V+R
Sbjct: 999  TDTRITPRTVSR 1010


>BT015263-1|AAT94492.1| 1374|Drosophila melanogaster LD37627p protein.
          Length = 1374

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 17/72 (23%), Positives = 34/72 (47%)

Query: 23   YTSSSRPFYVPKDLRTATHVFLRQGPARRSLQAPYLGPYKVLRRDEKTVDIEVQGKTQKV 82
            Y S + PF +P D +       +Q  A++  Q+      ++ + +  ++ +  + K  KV
Sbjct: 939  YNSMTGPFCLPPDQQQQQQTAQQQQSAQQQQQSSQQTQQQLEQNEALSLVVTPKKKRHKV 998

Query: 83   TIDRVKPAYVAR 94
            T  R+ P  V+R
Sbjct: 999  TDTRITPRTVSR 1010


>AY060832-1|AAL28380.1|  313|Drosophila melanogaster GM01605p
           protein.
          Length = 313

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 5/47 (10%)

Query: 59  GPYKVLRRDEKTVDIEVQGKTQKVTIDRVKPAYVAREDLNASQSRIQ 105
           GP  ++ + E T DI + GK     I+  +P YV RED N+ Q+ I+
Sbjct: 32  GPPSIVAKRE-TADIPLLGKI----INYAQPIYVQREDPNSRQNTIR 73


>AY060680-1|AAL28228.1|  598|Drosophila melanogaster GH11848p
           protein.
          Length = 598

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 17/72 (23%), Positives = 34/72 (47%)

Query: 23  YTSSSRPFYVPKDLRTATHVFLRQGPARRSLQAPYLGPYKVLRRDEKTVDIEVQGKTQKV 82
           Y S + PF +P D +       +Q  A++  Q+      ++ + +  ++ +  + K  KV
Sbjct: 328 YNSMTGPFCLPPDQQQQQQTAQQQQSAQQQQQSSQQTQQQLEQNEALSLVVTPKKKRHKV 387

Query: 83  TIDRVKPAYVAR 94
           T  R+ P  V+R
Sbjct: 388 TDTRITPRTVSR 399


>AF190403-1|AAF05703.1| 1403|Drosophila melanogaster homeodomain
            transcription factorProspero protein.
          Length = 1403

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 17/72 (23%), Positives = 34/72 (47%)

Query: 23   YTSSSRPFYVPKDLRTATHVFLRQGPARRSLQAPYLGPYKVLRRDEKTVDIEVQGKTQKV 82
            Y S + PF +P D +       +Q  A++  Q+      ++ + +  ++ +  + K  KV
Sbjct: 939  YNSMTGPFCLPPDQQQQQQTAQQQQSAQQQQQSSQQTQQQLEQNEALSLVVTPKKKRHKV 998

Query: 83   TIDRVKPAYVAR 94
            T  R+ P  V+R
Sbjct: 999  TDTRITPRTVSR 1010


>AE014298-1345|AAF46506.3|  452|Drosophila melanogaster CG32699-PA,
           isoform A protein.
          Length = 452

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 5/47 (10%)

Query: 59  GPYKVLRRDEKTVDIEVQGKTQKVTIDRVKPAYVAREDLNASQSRIQ 105
           GP  ++ + E T DI + GK     I+  +P YV RED N+ Q+ I+
Sbjct: 171 GPPSIVAKRE-TADIPLLGKI----INYAQPIYVQREDPNSRQNTIR 212


>AE014298-1344|ABI30972.1|  533|Drosophila melanogaster CG32699-PB,
           isoform B protein.
          Length = 533

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 5/47 (10%)

Query: 59  GPYKVLRRDEKTVDIEVQGKTQKVTIDRVKPAYVAREDLNASQSRIQ 105
           GP  ++ + E T DI + GK     I+  +P YV RED N+ Q+ I+
Sbjct: 171 GPPSIVAKRE-TADIPLLGKI----INYAQPIYVQREDPNSRQNTIR 212


>AE014297-1287|AAN13500.2| 1374|Drosophila melanogaster CG17228-PD,
            isoform D protein.
          Length = 1374

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 17/72 (23%), Positives = 34/72 (47%)

Query: 23   YTSSSRPFYVPKDLRTATHVFLRQGPARRSLQAPYLGPYKVLRRDEKTVDIEVQGKTQKV 82
            Y S + PF +P D +       +Q  A++  Q+      ++ + +  ++ +  + K  KV
Sbjct: 939  YNSMTGPFCLPPDQQQQQQTAQQQQSAQQQQQSSQQTQQQLEQNEALSLVVTPKKKRHKV 998

Query: 83   TIDRVKPAYVAR 94
            T  R+ P  V+R
Sbjct: 999  TDTRITPRTVSR 1010


>AE014297-1286|AAF54628.2| 1403|Drosophila melanogaster CG17228-PC,
            isoform C protein.
          Length = 1403

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 17/72 (23%), Positives = 34/72 (47%)

Query: 23   YTSSSRPFYVPKDLRTATHVFLRQGPARRSLQAPYLGPYKVLRRDEKTVDIEVQGKTQKV 82
            Y S + PF +P D +       +Q  A++  Q+      ++ + +  ++ +  + K  KV
Sbjct: 939  YNSMTGPFCLPPDQQQQQQTAQQQQSAQQQQQSSQQTQQQLEQNEALSLVVTPKKKRHKV 998

Query: 83   TIDRVKPAYVAR 94
            T  R+ P  V+R
Sbjct: 999  TDTRITPRTVSR 1010


>AE014297-1285|AAN13501.2| 1535|Drosophila melanogaster CG17228-PA,
            isoform A protein.
          Length = 1535

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 17/72 (23%), Positives = 34/72 (47%)

Query: 23   YTSSSRPFYVPKDLRTATHVFLRQGPARRSLQAPYLGPYKVLRRDEKTVDIEVQGKTQKV 82
            Y S + PF +P D +       +Q  A++  Q+      ++ + +  ++ +  + K  KV
Sbjct: 1100 YNSMTGPFCLPPDQQQQQQTAQQQQSAQQQQQSSQQTQQQLEQNEALSLVVTPKKKRHKV 1159

Query: 83   TIDRVKPAYVAR 94
            T  R+ P  V+R
Sbjct: 1160 TDTRITPRTVSR 1171


>AY061023-1|AAL28571.1|  567|Drosophila melanogaster HL04910p
           protein.
          Length = 567

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 13/46 (28%), Positives = 23/46 (50%)

Query: 50  RRSLQAPYLGPYKVLRRDEKTVDIEVQGKTQKVTIDRVKPAYVARE 95
           R  L    +   K+L+ D +T   E + + QK+ +D+ KP  +  E
Sbjct: 97  RAKLNLDAMTMIKMLQNDPRTAKQEAKQQKQKIALDQAKPVKLENE 142


>AE013599-1304|AAM68738.1|  567|Drosophila melanogaster CG7759-PB,
           isoform B protein.
          Length = 567

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 13/46 (28%), Positives = 23/46 (50%)

Query: 50  RRSLQAPYLGPYKVLRRDEKTVDIEVQGKTQKVTIDRVKPAYVARE 95
           R  L    +   K+L+ D +T   E + + QK+ +D+ KP  +  E
Sbjct: 97  RAKLNLDAMTMIKMLQNDPRTAKQEAKQQKQKIALDQAKPVKLENE 142


>AE013599-1303|AAF58645.2|  660|Drosophila melanogaster CG7759-PA,
           isoform A protein.
          Length = 660

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 13/46 (28%), Positives = 23/46 (50%)

Query: 50  RRSLQAPYLGPYKVLRRDEKTVDIEVQGKTQKVTIDRVKPAYVARE 95
           R  L    +   K+L+ D +T   E + + QK+ +D+ KP  +  E
Sbjct: 190 RAKLNLDAMTMIKMLQNDPRTAKQEAKQQKQKIALDQAKPVKLENE 235


>M81389-1|AAA28841.1| 1407|Drosophila melanogaster Pros protein
            protein.
          Length = 1407

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 17/72 (23%), Positives = 34/72 (47%)

Query: 23   YTSSSRPFYVPKDLRTATHVFLRQGPARRSLQAPYLGPYKVLRRDEKTVDIEVQGKTQKV 82
            Y S + PF +P D +       +Q  A++  Q+      ++ + +  ++ +  + K  KV
Sbjct: 939  YNSMTGPFCLPPDQQQQQQSAQQQQSAQQQQQSSQQTQQQLEQNEALSLVVTPKKKRHKV 998

Query: 83   TIDRVKPAYVAR 94
            T  R+ P  V+R
Sbjct: 999  TDTRITPRTVSR 1010


>BT003594-1|AAO39597.1|  533|Drosophila melanogaster HL01250p
           protein.
          Length = 533

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 5/47 (10%)

Query: 59  GPYKVLRRDEKTVDIEVQGKTQKVTIDRVKPAYVAREDLNASQSRIQ 105
           GP  ++ + E T DI + GK     I+  +P YV RED N+ Q+ I+
Sbjct: 171 GPPSMVAKRE-TADIPLLGKI----INYAQPIYVQREDPNSRQNTIR 212


>BT021475-1|AAX33623.1|  379|Drosophila melanogaster AT02876p
           protein.
          Length = 379

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 5/51 (9%)

Query: 22  WYTSSSRPFYVPKDLRTATHVFLRQGPARRSLQAPYLGPYKVLRRDEKTVD 72
           W T   R FY     R  +  FLR+ P        Y G  ++LRRD+++ D
Sbjct: 306 WRTEGIRGFY-----RGLSSTFLREMPGYFFFFGSYEGTRELLRRDDQSKD 351


>AY061222-1|AAL28770.1|  305|Drosophila melanogaster LD16544p
           protein.
          Length = 305

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 5/51 (9%)

Query: 22  WYTSSSRPFYVPKDLRTATHVFLRQGPARRSLQAPYLGPYKVLRRDEKTVD 72
           W T   R FY     R  +  FLR+ P        Y G  ++LRRD+++ D
Sbjct: 170 WRTEGIRGFY-----RGLSSTFLREMPGYFFFFGSYEGTRELLRRDDQSKD 215


>AE014298-1472|AAF46607.2|  459|Drosophila melanogaster CG1628-PB
           protein.
          Length = 459

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 5/51 (9%)

Query: 22  WYTSSSRPFYVPKDLRTATHVFLRQGPARRSLQAPYLGPYKVLRRDEKTVD 72
           W T   R FY     R  +  FLR+ P        Y G  ++LRRD+++ D
Sbjct: 324 WRTEGIRGFY-----RGLSSTFLREMPGYFFFFGSYEGTRELLRRDDQSKD 369


>AE014297-3578|ABI31205.1| 1728|Drosophila melanogaster CG34100-PB,
           isoform B protein.
          Length = 1728

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 3/93 (3%)

Query: 11  HMSKLTPQPTSWYTSSSRPFYVPKDLRTATHVFLRQGPARRSLQAPYLGPYKVLRRDEKT 70
           HMS L+  P   + S S P       R    +  +Q P + S   P         R  + 
Sbjct: 222 HMSDLSVGPCCGFESDSNPSSTSNSARRTVILVKQQSPEKTS---PMYDLMPRRGRRPRK 278

Query: 71  VDIEVQGKTQKVTIDRVKPAYVAREDLNASQSR 103
             I +  K Q+ ++ R +P Y   + +N    +
Sbjct: 279 APIYMPAKRQRRSLVRKEPLYRKAQPVNEENKK 311


>AE014297-3577|AAN14004.2| 1918|Drosophila melanogaster CG34100-PA,
           isoform A protein.
          Length = 1918

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 3/93 (3%)

Query: 11  HMSKLTPQPTSWYTSSSRPFYVPKDLRTATHVFLRQGPARRSLQAPYLGPYKVLRRDEKT 70
           HMS L+  P   + S S P       R    +  +Q P + S   P         R  + 
Sbjct: 412 HMSDLSVGPCCGFESDSNPSSTSNSARRTVILVKQQSPEKTS---PMYDLMPRRGRRPRK 468

Query: 71  VDIEVQGKTQKVTIDRVKPAYVAREDLNASQSR 103
             I +  K Q+ ++ R +P Y   + +N    +
Sbjct: 469 APIYMPAKRQRRSLVRKEPLYRKAQPVNEENKK 501


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.317    0.131    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,880,242
Number of Sequences: 52641
Number of extensions: 266954
Number of successful extensions: 668
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 643
Number of HSP's gapped (non-prelim): 34
length of query: 136
length of database: 24,830,863
effective HSP length: 78
effective length of query: 58
effective length of database: 20,724,865
effective search space: 1202042170
effective search space used: 1202042170
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)