Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002022-TA|BGIBMGA002022-PA|undefined
(136 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99942-9|CAB17073.3| 675|Caenorhabditis elegans Hypothetical pr... 27 6.2
AY652945-1|AAT73712.1| 675|Caenorhabditis elegans guanylate cyc... 27 6.2
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 27 6.2
AL008867-4|CAD56232.2| 675|Caenorhabditis elegans Hypothetical ... 27 6.2
Z92972-4|CAB07489.2| 337|Caenorhabditis elegans Hypothetical pr... 26 8.2
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 26 8.2
AF047665-1|AAP13766.1| 499|Caenorhabditis elegans Hypothetical ... 26 8.2
AC025724-4|AAP31423.1| 612|Caenorhabditis elegans Hypothetical ... 26 8.2
AC025724-3|AAG23379.2| 662|Caenorhabditis elegans Hypothetical ... 26 8.2
AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical... 26 8.2
>Z99942-9|CAB17073.3| 675|Caenorhabditis elegans Hypothetical
protein C46E1.2 protein.
Length = 675
Score = 26.6 bits (56), Expect = 6.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 89 PAYVAREDLNASQSRIQSPNPVIRVPCAKNVK 120
P Y D + SR++S +P+ R+ C++N K
Sbjct: 562 PRYCLFGDTVNTSSRMESHSPIGRIHCSENAK 593
>AY652945-1|AAT73712.1| 675|Caenorhabditis elegans guanylate
cyclase-like protein protein.
Length = 675
Score = 26.6 bits (56), Expect = 6.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 89 PAYVAREDLNASQSRIQSPNPVIRVPCAKNVK 120
P Y D + SR++S +P+ R+ C++N K
Sbjct: 562 PRYCLFGDTVNTSSRMESHSPIGRIHCSENAK 593
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 26.6 bits (56), Expect = 6.2
Identities = 11/19 (57%), Positives = 12/19 (63%)
Query: 106 SPNPVIRVPCAKNVKPRPL 124
SP PV R+P K V P PL
Sbjct: 489 SPQPVYRLPSPKPVTPEPL 507
>AL008867-4|CAD56232.2| 675|Caenorhabditis elegans Hypothetical
protein C46E1.2 protein.
Length = 675
Score = 26.6 bits (56), Expect = 6.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 89 PAYVAREDLNASQSRIQSPNPVIRVPCAKNVK 120
P Y D + SR++S +P+ R+ C++N K
Sbjct: 562 PRYCLFGDTVNTSSRMESHSPIGRIHCSENAK 593
>Z92972-4|CAB07489.2| 337|Caenorhabditis elegans Hypothetical
protein T19C9.4 protein.
Length = 337
Score = 26.2 bits (55), Expect = 8.2
Identities = 17/66 (25%), Positives = 29/66 (43%)
Query: 28 RPFYVPKDLRTATHVFLRQGPARRSLQAPYLGPYKVLRRDEKTVDIEVQGKTQKVTIDRV 87
R F + ++T+ +F+ PA L A + G Y+ + V I G + ++I V
Sbjct: 251 RTFLISVSIQTSIPLFVIIAPAMAVLLASWTGTYRQEWMNLSNVCIATHGLAESISIMLV 310
Query: 88 KPAYVA 93
Y A
Sbjct: 311 HKPYRA 316
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/55 (21%), Positives = 28/55 (50%)
Query: 65 RRDEKTVDIEVQGKTQKVTIDRVKPAYVAREDLNASQSRIQSPNPVIRVPCAKNV 119
R+ ++ D E +T+K ++ R K + ++ + + + + S RVP ++ V
Sbjct: 9 RKSQRARDFEESEETEKPSLTRRKSSRLSTQSVPIEKKKTPSSKTTKRVPVSERV 63
>AF047665-1|AAP13766.1| 499|Caenorhabditis elegans Hypothetical
protein T23E1.2 protein.
Length = 499
Score = 26.2 bits (55), Expect = 8.2
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 68 EKTVDIEVQGKTQKVTIDRVKPAYVAREDLNASQSRIQSPNPVIRVPCAKNVKPRPLQHV 127
EK + + +GK V DR++ A + +N S I SPN + A+N+ P + +
Sbjct: 56 EKIILADYEGK---VVADRLRRVIDANKSMNFGISNILSPNLRMLTLVAENM-PFKNRFI 111
Query: 128 AGASYLS 134
SYLS
Sbjct: 112 CFFSYLS 118
>AC025724-4|AAP31423.1| 612|Caenorhabditis elegans Hypothetical
protein Y67D8C.3b protein.
Length = 612
Score = 26.2 bits (55), Expect = 8.2
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 68 EKTVDIEVQGKTQKVTIDRVKPAYVAREDLNASQSRIQSPNPVIRVPCAKNVKPRPLQHV 127
EK + + +GK V DR++ A + +N S I SPN + A+N+ P + +
Sbjct: 178 EKIILADYEGK---VVADRLRRVIDANKSMNFGISNILSPNLRMLTLVAENM-PFKNRFI 233
Query: 128 AGASYLS 134
SYLS
Sbjct: 234 CFFSYLS 240
>AC025724-3|AAG23379.2| 662|Caenorhabditis elegans Hypothetical
protein Y67D8C.3a protein.
Length = 662
Score = 26.2 bits (55), Expect = 8.2
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 68 EKTVDIEVQGKTQKVTIDRVKPAYVAREDLNASQSRIQSPNPVIRVPCAKNVKPRPLQHV 127
EK + + +GK V DR++ A + +N S I SPN + A+N+ P + +
Sbjct: 228 EKIILADYEGK---VVADRLRRVIDANKSMNFGISNILSPNLRMLTLVAENM-PFKNRFI 283
Query: 128 AGASYLS 134
SYLS
Sbjct: 284 CFFSYLS 290
>AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical
protein Y61A9LA.10 protein.
Length = 986
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 61 YK-VLRRDEKTVDIEVQGKTQKVTIDRVKPAYVARED 96
YK ++R++ ++ I + K QK ++KP Y ARE+
Sbjct: 854 YKPIVRKEFESAPIHLPPKLQKSLPFKMKPTYQAREE 890
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.131 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,339,475
Number of Sequences: 27539
Number of extensions: 128231
Number of successful extensions: 344
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 337
Number of HSP's gapped (non-prelim): 11
length of query: 136
length of database: 12,573,161
effective HSP length: 74
effective length of query: 62
effective length of database: 10,535,275
effective search space: 653187050
effective search space used: 653187050
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
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