Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002020-TA|BGIBMGA002020-PA|IPR006076|FAD dependent
oxidoreductase, IPR006222|Glycine cleavage T protein (aminomethyl
transferase), IPR013977|Glycine cleavage T-protein, C-terminal barrel
(975 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57131| Best HMM Match : GCV_T (HMM E-Value=7e-25) 284 3e-76
SB_28511| Best HMM Match : No HMM Matches (HMM E-Value=.) 215 2e-55
SB_1356| Best HMM Match : GCV_T (HMM E-Value=5.1e-40) 175 2e-43
SB_26779| Best HMM Match : No HMM Matches (HMM E-Value=.) 170 5e-42
SB_58622| Best HMM Match : GCV_T (HMM E-Value=6e-17) 152 1e-36
SB_31872| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 3e-16
SB_6288| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 2e-07
SB_46888| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 1e-06
SB_58214| Best HMM Match : DAO (HMM E-Value=0.00017) 39 0.022
SB_23268| Best HMM Match : HEAT (HMM E-Value=0.31) 33 1.5
SB_612| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.9
SB_41005| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.6
SB_17506| Best HMM Match : DUF755 (HMM E-Value=0.72) 32 2.6
SB_54859| Best HMM Match : RVT_1 (HMM E-Value=0) 31 4.5
SB_48946| Best HMM Match : RVT_1 (HMM E-Value=1.49939e-43) 31 4.5
SB_47293| Best HMM Match : Exo_endo_phos (HMM E-Value=1.4e-06) 31 4.5
SB_38360| Best HMM Match : AT_hook (HMM E-Value=3.3) 31 4.5
SB_36139| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.5
SB_32387| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.5
SB_12170| Best HMM Match : RVT_1 (HMM E-Value=0.58) 31 4.5
SB_8476| Best HMM Match : AT_hook (HMM E-Value=3.3) 31 4.5
SB_1360| Best HMM Match : RVT_1 (HMM E-Value=0) 31 4.5
SB_56412| Best HMM Match : AT_hook (HMM E-Value=3.3) 31 4.5
SB_44220| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.5
SB_43639| Best HMM Match : AT_hook (HMM E-Value=3.3) 31 4.5
SB_42325| Best HMM Match : RVT_1 (HMM E-Value=0.52) 31 4.5
SB_30735| Best HMM Match : AT_hook (HMM E-Value=3.3) 31 4.5
SB_26530| Best HMM Match : RVT_1 (HMM E-Value=0.58) 31 4.5
SB_23084| Best HMM Match : AT_hook (HMM E-Value=3.3) 31 4.5
SB_22656| Best HMM Match : AT_hook (HMM E-Value=3.3) 31 4.5
SB_12973| Best HMM Match : AT_hook (HMM E-Value=3.3) 31 4.5
SB_4403| Best HMM Match : AT_hook (HMM E-Value=3.3) 31 4.5
SB_2120| Best HMM Match : AT_hook (HMM E-Value=3.3) 31 4.5
SB_49557| Best HMM Match : RVT_1 (HMM E-Value=0.58) 31 5.9
SB_24790| Best HMM Match : AT_hook (HMM E-Value=3.3) 31 5.9
SB_46232| Best HMM Match : TPP_enzyme_M (HMM E-Value=1.3e-24) 30 7.9
>SB_57131| Best HMM Match : GCV_T (HMM E-Value=7e-25)
Length = 537
Score = 284 bits (696), Expect = 3e-76
Identities = 164/480 (34%), Positives = 250/480 (52%), Gaps = 29/480 (6%)
Query: 454 QMLNYHVAAGMKTVGISAAGGVAEATVDEIIDGYSKYDMHELGVNPFLGLHNNKRFLRDR 513
++ NY VAAGM + GI++A GV +A + I +G+ D+ + + F NNK+FLRDR
Sbjct: 82 EVRNYFVAAGMCSSGIASAAGVGKALSEWITEGHPTMDLWPVDIRRFGNHFNNKQFLRDR 141
Query: 514 VKEVPGVHYGLPYPFYEFETGRNLRLSPIYPTLRDNGAVFGQVMGYERPTWFETVENESE 573
V+E G HY + YP+ E +T R ++ SP+Y L G + F ++
Sbjct: 142 VRETLGWHYVMRYPYSEKQTARGVKCSPLYAQLIQPGRSGASGWAGKGQGGFSWMK---- 197
Query: 574 KPRPFKIAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVE-LLQY 632
KP +F VQ EY AC V L D +S +I S E +Q
Sbjct: 198 --------------KPAFFRNVQVEYAACHNSVALVDMTSVGLFEISSADPASCEQFMQT 243
Query: 633 LCSNDVDVPVGSIIHTGMQNERGGYENDCSLARISENHYMMIAPTIQQTRCKVWLKRHLP 692
LC+ DV VP+G I+ T M N+RGGYE +C++AR +EN Y+++ PT + W+ RH+P
Sbjct: 244 LCARDVGVPIGHIVQTAMLNKRGGYELECTVARTAENRYIIMVPTAHTVLAQNWISRHIP 303
Query: 693 SNGSVTLSDVTSMYTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGLANGIRAM 752
+ S+TL D+ S + + V+GP + ++P TFKE+ +G A+ ++A
Sbjct: 304 NRSSITLRDIQSGFVVLGVLGPMS-AELLQGFTTTDLTSDYPIDTFKELSLGFASDVKAF 362
Query: 753 NLTHTGEL--GYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAFWGQD 810
T+ G+L G+ L IP E+A +Y++L G+ I +VG YA ALRVEK + G +
Sbjct: 363 KRTNVGDLEQGWQLIIPTEYASGLYSQLTKAGKAMDIRNVGCYAVDALRVEKGYPRLGIE 422
Query: 811 LDTMTTPLECGRTWRVKFDKDIKFIGRDALLKQREDGIRRQYVQXXXXXXXXXXXXWSWG 870
L P + G R+ K+ +FIGR ALL ++ I ++ + WG
Sbjct: 423 LTPFVNPFQAGLESRICMFKNEEFIGRSALLSLQDQPITKRLL--FMAMEEHDDTNIPWG 480
Query: 871 GEPIYRDGNYCGQTTTTSYGFTFKKQVCLGFVEKRDKDGVTQKVDNDYVLSGHYEIDIAG 930
GEPI R+G G T++ S+ FT VC+G+V V ++Y+ G +EID+AG
Sbjct: 481 GEPILRNGEIVGTTSSASFSFTLNAPVCMGYV-----SNAGHPVSDEYIRDGKFEIDVAG 535
Score = 52.0 bits (119), Expect = 2e-06
Identities = 21/42 (50%), Positives = 34/42 (80%)
Query: 340 VLLQELLQRVPGLNQAVLHKLCNGLEAFSPDCKWIVGEAPEI 381
VL++++L RVP L+ A + +L NG E+F+PD ++I+GEAPE+
Sbjct: 42 VLMEQMLHRVPALHNAEIRQLVNGPESFTPDGQYILGEAPEV 83
>SB_28511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 571
Score = 215 bits (524), Expect = 2e-55
Identities = 120/354 (33%), Positives = 199/354 (56%), Gaps = 13/354 (3%)
Query: 35 YEEKLEDCLSVLPSKAKVVICGGGVMGAAVAYHLANRGWGDRTVVVEKEKVGAGSRWHSS 94
Y+ K S +P++A VV+ GGG +G + YHL G + +++E++K+ +G+ WHS+
Sbjct: 94 YQSKDSSTPSSVPAEADVVVIGGGSVGTSTLYHLTKMGVKN-VILLERDKLTSGTTWHSA 152
Query: 95 GLVGAFKPTLAQVRLAQSSIRLLKELEAR-GRPTGWKQCGSLLLARTRDRMTVYRRMKSQ 153
GL+ +P+ +V + + L K LE G GW + G L +A ++R+ Y+R+ +
Sbjct: 153 GLLWRLRPSDQEVEIIGHTRDLAKSLEEETGVSPGWIENGGLFIANNKERLDEYKRLMTL 212
Query: 154 SVSWSIDCDLVTPKKCHELFPMLNVEDVLGGLWIPGDGVGDPHLLCMSLMREATDKGVGV 213
+ ID ++ PK EL+P++NV+D+ G L+ PGDG DP +L R AT +G V
Sbjct: 213 GHCYGIDSHVLDPKATKELYPLMNVKDLYGTLYSPGDGTIDPAGWASALTRGATKRGAKV 272
Query: 214 MEDCSVTAVLSKDD-----KVSGVETTNGAIECDYFINCAGFWARQVGQLARPQVKVPLL 268
E+C VT + ++ D +VSG++T G I+ +NC G WA VG +A VKVPL+
Sbjct: 273 FENCPVTGITTEVDDFGVLRVSGIDTVAGHIKTKNVVNCGGCWAPAVGAMA--GVKVPLV 330
Query: 269 PCEHYYLHTKPIDNLDPMTPVIRDPDGYIYLRERDGCILAGGFEPIAKPVYEEEIENASQ 328
H Y+ ++ I+ + M P +RD D +YL+ + + GG+E P++ E ++
Sbjct: 331 AMHHAYIVSERIEGIQSM-PNVRDHDASVYLKLQGDGLSIGGYE--QNPIFWENVKKDFA 387
Query: 329 RCLPE-DWDHFHVLLQELLQRVPGLNQAVLHKLCNGLEAFSPDCKWIVGEAPEI 381
L + DWD F V ++ RVP + + + G E+F+ D K ++GEAPE+
Sbjct: 388 FSLFDLDWDVFSVHIEGACNRVPVIAETGVKSTVCGPESFTSDHKPLMGEAPEL 441
>SB_1356| Best HMM Match : GCV_T (HMM E-Value=5.1e-40)
Length = 1006
Score = 175 bits (425), Expect = 2e-43
Identities = 120/431 (27%), Positives = 196/431 (45%), Gaps = 34/431 (7%)
Query: 454 QMLNYHVAAGMKTVGISAAGGVAEATVDEIIDGYSKYDMHELGVNPF-LGLHNNKRFLRD 512
++ +++ G + GI AGG +++G+ + DM+ + F + N+++L +
Sbjct: 59 ELRGFYLGCGFNSAGIMLAGGCGRELAKWVVNGHPELDMYGYDIRRFHSSITGNQKWLSE 118
Query: 513 RVKEVPGVHYGLPYPFYEFETGRNLRLSPIYPTLRDNGAVFGQVMGYERPTWFETVENES 572
R E +Y + +P E GRN+R P + L DNG V+ + G+ERP WF+
Sbjct: 119 RSHEAYAKNYSMVFPHDEPLAGRNMRCDPFHQVLLDNGCVYQERHGWERPGWFKPDSKPQ 178
Query: 573 EKPRPFKIAHTR----------------TFGKPPWFDAVQREYWACRERVGLSDYSSFTK 616
K F ++ R TF PP D + E ACR + + S F K
Sbjct: 179 LKDYDFYGSYDRPSHEDYLYKDLLSQEYTFDFPPHHDIIGAEAKACRSNAAVFNMSYFAK 238
Query: 617 IDIQSQGREVVELLQYLCSNDVDVPVGSIIHTGMQNERGGYENDCSLARIS--------- 667
I G + + + ++ + ++ GS+ +T M N+ GG E D +++ +
Sbjct: 239 YYIS--GLDAQKAVDWIFTANMQKKPGSVTYTCMCNKDGGVEADLTVSVLEPGDGSTAAL 296
Query: 668 -----ENHYMMIAPTIQQTRCKVWLKRHLPSNGSVTLSDVTSMYTAICVMGPFTRXXXXX 722
Y+ I + Q V L +VT+ + V GP +R
Sbjct: 297 PHFDGNGFYVAIGGGVGQHSYSHLTNVIAEKGFDVKLEEVTNDLGMLSVQGPKSREILSK 356
Query: 723 XXXXXXXXXNFPFFTFKEIDVGLANGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVG 782
F F T K I++ + +RA+ LT GELG+ L+IP + + VY +M G
Sbjct: 357 LTDADLSDEAFYFSTHKMINIA-GHPVRALRLTFVGELGWELHIPRDSCVPVYRAVMEAG 415
Query: 783 EKYGISHVGYYASRALRVEKFFAFWGQDLDTMTTPLECGRTWRVKFDKDIKFIGRDALLK 842
++GI + GY A +L EK + W QDL TPLE G + K KD F+GR+AL K
Sbjct: 416 REHGIVNAGYRAIDSLSAEKGYKHWHQDLRHDDTPLEAGLGFTCKLKKDTPFLGREALEK 475
Query: 843 QREDGIRRQYV 853
Q+ +GI+++ V
Sbjct: 476 QKAEGIKKRLV 486
Score = 37.9 bits (84), Expect = 0.039
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 334 DWDHFHVLLQELLQRVPGLNQAVLHKLCNGLEAFSPDCKWIVGEAPEI 381
DWD F V ++ RVP + + + G E+F+ D K ++GEAPE+
Sbjct: 13 DWDVFSVHIEGACNRVPVIAETGVKSTVCGPESFTSDHKPLMGEAPEL 60
>SB_26779| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 611
Score = 170 bits (413), Expect = 5e-42
Identities = 109/356 (30%), Positives = 176/356 (49%), Gaps = 26/356 (7%)
Query: 585 TFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQG-REVVELLQYLCSNDVDVPVG 643
TFG+PPW V++EY AC+E VGL D +S ++I+SQ V+LLQ LC +D D+P+
Sbjct: 256 TFGRPPWLANVEQEYRACKEGVGLVDLTSTGILEIKSQDVHGCVDLLQKLCIDDADIPIN 315
Query: 644 SIIHTGMQNERGGYENDCSLARISEN-------HYMMIAPTIQQTRCKVWLKRHLPSNGS 696
++HT M N GG+E C+L R N ++++A R W+ RH +
Sbjct: 316 GVLHTAMLNHDGGFELQCTLVRTHPNSSNIVNCRFLLLAKPSYLVRAISWVTRHAADD-- 373
Query: 697 VTLSDVTSMYTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGLANGIRAM--NL 754
VT++D+ S + + V+GP +R FP T + ID+ A + + +
Sbjct: 374 VTVTDLQSNCSILGVLGPTSRDLMQPLTQTPLGIEEFPVDTCQVIDIDFACDVTLICSSQ 433
Query: 755 THTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAFWGQDLDTM 814
G++L +PN+ +Y +L G + VG+YA A+ EK G ++
Sbjct: 434 LAASNDGWLLLVPNDQVTTLYRKLKNCGAR----DVGWYAVDAITEEKGMPGLGAEIHPW 489
Query: 815 TTPLECGRTWRVKFDKDIKFIGRDALLKQREDGIRRQYVQXXXXXXXXXXXXWSWGGEPI 874
TPLE G DK ++F G+DAL K+R+ + ++ + WGGE I
Sbjct: 490 ITPLEAGLD---SADKKLEFYGKDALAKKRDKPLTKRL--AFVKVKQNDDDYFPWGGETI 544
Query: 875 YRDGNYCGQTTTTSYGFTFKKQVCLGFVEKRDKDGVTQKVDNDYVLSGHYEIDIAG 930
+G+ G T++ Y F + VC VE KDG +++ D++ +++IAG
Sbjct: 545 VHNGDVIGMVTSSVYSFAQGRPVCFALVE---KDG--EEITADFLQGKRLQMNIAG 595
Score = 119 bits (286), Expect = 1e-26
Identities = 66/194 (34%), Positives = 103/194 (53%), Gaps = 6/194 (3%)
Query: 263 VKVPLLPCEHYYLHTKPIDNLDPMTPVIRDPDGYIYLRERDGCILAGGFEPIAKPVYEEE 322
V +PL P EH+Y+ T+PI M P++RDPDG++Y RE G I AGG EPIAKPV+ +
Sbjct: 44 VHIPLHPVEHFYIITQPI-GASHMLPMLRDPDGHVYFREWGGGICAGGLEPIAKPVFTQG 102
Query: 323 IENASQ-RCLPEDWDHFHVLLQELLQRVPGLNQAVLHKLCNGLEAFSPDCKWIVGEAPEI 381
+ + + EDWD F L+ E++ R+P + + + ++ NG E+F+PD + I+GEAP +
Sbjct: 103 VPRHFEFQLFQEDWDQFECLMGEIIHRIPEMERTEIRQMVNGPESFTPDGRCIMGEAPNV 162
Query: 382 FRIIINLPYSTSDSIVSVHLLRRLRMGF---RPPRGVSTNEINH-KNPEEISDTLVSNSR 437
+ T+ + + R L RPP VS +I + L R
Sbjct: 163 RNYFVAAGACTNGIANAAGVGRLLSEWITKGRPPLNVSCLDIKRFSHHHNNLSYLRERIR 222
Query: 438 SVKVVIFPISLSER 451
+K+ P ++ R
Sbjct: 223 GMKIPFMPYDMNAR 236
Score = 49.2 bits (112), Expect = 2e-05
Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 15/118 (12%)
Query: 457 NYHVAAGMKTVGISAAGGVAEATVDEIIDGYSKYDMHELGVNPFLGLHNNKRFLRDRVKE 516
NY VAAG T GI+ A GV + I G ++ L + F HNN +LR+R++
Sbjct: 164 NYFVAAGACTNGIANAAGVGRLLSEWITKGRPPLNVSCLDIKRFSHHHNNLSYLRERIR- 222
Query: 517 VPGVHYGLPYPFYEFE-TGRNLRLSPIYPTL-RDNGAVFGQVMG-YERPTWFETVENE 571
G+ PF ++ R +R+S +P L DN + + +G + RP W VE E
Sbjct: 223 ------GMKIPFMPYDMNARIVRIS--FPILFSDNNS---KTLGTFGRPPWLANVEQE 269
>SB_58622| Best HMM Match : GCV_T (HMM E-Value=6e-17)
Length = 515
Score = 152 bits (369), Expect = 1e-36
Identities = 107/379 (28%), Positives = 181/379 (47%), Gaps = 22/379 (5%)
Query: 432 LVSNSRSVKVVIFPISLSERRFQML-------NYHVAAGMKTVGISAAGGVAEATVDEII 484
+++N+ VV PI+ S ML N VA G GI +GG+ + D II
Sbjct: 109 VLANADISSVVCGPITYSPDVLAMLGPDIELPNMWVAIGTG-YGIIHSGGIGKYLSDWII 167
Query: 485 DGYSKYDMHELGVNPFLGLHNNKRFLRDRVKEVPGVHYGLPYPFYEFETGRNLRLSPIYP 544
DG +YD++EL + G K ++ + +E G++ + +P E GR +R S IY
Sbjct: 168 DGEPQYDLNELDPGRY-GKWFTKEYVHTKARESYGLNNQILHPKMERFRGRPMRTSGIYE 226
Query: 545 TLRDNGAVFGQVMGYERPTWFETVENESEKPRPFKIAHTRTFGKPPWFDAVQREYWACRE 604
+ GA G +G+E+P WF +E + +F + WF+ V RE
Sbjct: 227 RTLEQGAEMGFHVGWEQPNWFVKPGDEG--------GYKPSFRRTNWFEPVGREVDLVLN 278
Query: 605 RVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVDVPVGSIIHTGMQNERGGYENDCSLA 664
RVG+ D S F K ++ G++ L + +N + +G+ + + RG + +++
Sbjct: 279 RVGVIDVSPFGKFEVT--GKDTKIFLDVMFANSLP-KIGTTNISHLLTPRGRVYAEMTVS 335
Query: 665 RISENHYMMIAPTIQQTRCKVWLKRHLPSNG-SVTLSDVTSMYTAICVMGPFTRXXXXXX 723
+ E+HY+++ + + WLK+H G VT ++T + V GP R
Sbjct: 336 ALGEDHYLLLTGSGSEFHDLRWLKKHATEGGYDVTFENLTDKVDTLGVAGPKARDVLQKL 395
Query: 724 XXXXXXXXNFPFFTFKEIDVGLANGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGE 783
F F K+I++ +RA+ +++TGELG+ LY E L +YN +M G+
Sbjct: 396 TTEDMSHGKFKFLNVKDIEMA-GVPVRAIRISYTGELGWELYCSKEHTLKLYNAIMEAGQ 454
Query: 784 KYGISHVGYYASRALRVEK 802
++GI + G +A LRV+K
Sbjct: 455 EFGIDNFGTFAMTTLRVKK 473
Score = 57.6 bits (133), Expect = 5e-08
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 10/140 (7%)
Query: 250 FWARQVGQLARPQVKVPLLPCEHYYLHTKPIDN---LDPMTPVIRDPDGYIYLRERDGCI 306
FWAR++G+LA V+ P+ P H Y+ T I L+ PVIRD +G YLR G +
Sbjct: 2 FWAREIGKLAG--VEYPVTPIHHQYMVTSSIPEVQALEKEIPVIRDLEGSYYLRMERGGL 59
Query: 307 LAGGFEPIAKPVYEEEIENA-----SQRCLPEDWDHFHVLLQELLQRVPGLNQAVLHKLC 361
L G +E + K +E+ + + D D L + R P L A + +
Sbjct: 60 LTGPYEDMDKMRLQEDWWDGVPAGFGKELYESDLDRLSDNLDYAMARFPVLANADISSVV 119
Query: 362 NGLEAFSPDCKWIVGEAPEI 381
G +SPD ++G E+
Sbjct: 120 CGPITYSPDVLAMLGPDIEL 139
>SB_31872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 84.6 bits (200), Expect = 3e-16
Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 686 WLKRHLPSNG-SVTLSDVTSMYTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVG 744
WLK+H G VT ++T + V GP R F F K+I++
Sbjct: 2 WLKKHATEGGYDVTFENLTDKVDTLGVAGPKARDVLQKLTTEDMSHGKFKFLNVKDIEMA 61
Query: 745 LANGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFF 804
+RA+ +++TGELG+ LY E L +YN +M G+++GI + G +A LRVEK F
Sbjct: 62 -GVPVRAIRISYTGELGWELYCSKEHTLKLYNAIMEAGQEFGIDNFGTFAMTTLRVEKGF 120
Query: 805 AFWG 808
WG
Sbjct: 121 RAWG 124
>SB_6288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 55.2 bits (127), Expect = 2e-07
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 203 MREATDKGVGVMEDCSVTAVLSKDDKVSGVETTNGAIECDYFINCAGFWARQVGQ 257
MR++ + GV + E + +V + V GV+T G I+CD FINCAG WAR+VGQ
Sbjct: 71 MRKSRE-GVRIYEKVQLQSVTTDGQYVDGVKTDKGDIKCDIFINCAGQWAREVGQ 124
>SB_46888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 53.2 bits (122), Expect = 1e-06
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 46 LPSKAKVVICGGGVMGAAVAYHLANRGWGDRTVVVEKEKVGAGSRWHS 93
L A+VVI GGG +G + AYHLA RG D V++EK ++ AGS WH+
Sbjct: 285 LKEDAEVVIIGGGCLGVSTAYHLAKRGLKD-VVLLEKSELTAGSTWHA 331
>SB_58214| Best HMM Match : DAO (HMM E-Value=0.00017)
Length = 280
Score = 38.7 bits (86), Expect = 0.022
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 52 VVICGGGVMGAAVAYHLANRGWGDRTVVVEKEKVGAGSRWHSSGLVGAFKPTLA---QVR 108
VVI GGGVMG++ A+H+A+R R V+E++ S+ S+ VG + + ++
Sbjct: 105 VVIVGGGVMGSSSAFHIASRDPTKRVCVIERDP--GYSKCSSTLSVGGIRQQFSMAENIQ 162
Query: 109 LAQSSIRLLKEL 120
L+Q S + E+
Sbjct: 163 LSQYSYKFFTEV 174
>SB_23268| Best HMM Match : HEAT (HMM E-Value=0.31)
Length = 154
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 333 EDWDHFHVLLQELLQRVPGLNQAVLHKLCNGLEAF-SPDCK----WIVGEAPE 380
+++D LLQ++ ++ P ++++ LC L++ P+ + WI+GE E
Sbjct: 21 QEFDRMPTLLQDIFRKYPNKYESIISTLCENLDSLDEPEARASMIWIIGEYAE 73
>SB_612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 32.3 bits (70), Expect = 1.9
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 46 LPSKAKVVICGGGVMGAAVAYHLANRGWGDRTVVVEKEKVGAGSRWHSS 94
+ S+ +VV+ GGG+ G + A +L N D T++ ++ G R H+S
Sbjct: 1 MSSRPRVVVIGGGIAGLSAALNLQNSKEVDVTILEASSRI--GGRIHTS 47
>SB_41005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 568
Score = 31.9 bits (69), Expect = 2.6
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 897 VCLGFVEKRDKDGVTQKVDNDYVLSGHYEI-DIAGIRYAAKVNLHSP 942
V L F + D G++ + ND L+ H E+ D A + A K++ HSP
Sbjct: 22 VVLNFETQLDDSGISARSSNDSGLTDHLEMADTANSKAALKLDEHSP 68
>SB_17506| Best HMM Match : DUF755 (HMM E-Value=0.72)
Length = 256
Score = 31.9 bits (69), Expect = 2.6
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 104 LAQVRLAQSSIRLLKELEARGRPTGWKQCGSLLLARTRDRMTVYRRMKSQSVSWSIDC 161
L V+ AQS +R K + + G ++C +L A R R R+ K + VS IDC
Sbjct: 183 LLWVKAAQSELRSAKHYKDLVKDLGVQECDGVLSASKRKRKR-KRKRKRKKVSKEIDC 239
>SB_54859| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 559
Score = 31.1 bits (67), Expect = 4.5
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 747 NGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAF 806
+GI+ +N+TH LG +L + +R+ V YG + SR L V A
Sbjct: 405 DGIKLVNVTHFKYLGSILSSDCSMRAELTSRIQAVSCAYGRLRKRVFDSRDLTVPTKIAV 464
Query: 807 WGQDLDTMTTPLECGRTWRV 826
+ Q L M L TW V
Sbjct: 465 YNQCL--MPLLLYGSETWTV 482
>SB_48946| Best HMM Match : RVT_1 (HMM E-Value=1.49939e-43)
Length = 1074
Score = 31.1 bits (67), Expect = 4.5
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 747 NGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAF 806
+GI+ +N+TH LG +L + +R+ V YG + SR L V A
Sbjct: 849 DGIKLVNVTHFKYLGSILSSDCSMRAELTSRIQAVSCAYGRLRKRVFDSRDLTVPTKIAV 908
Query: 807 WGQDLDTMTTPLECGRTWRV 826
+ Q L M L TW V
Sbjct: 909 YNQCL--MPLLLYGSETWTV 926
>SB_47293| Best HMM Match : Exo_endo_phos (HMM E-Value=1.4e-06)
Length = 744
Score = 31.1 bits (67), Expect = 4.5
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 747 NGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAF 806
+GI+ +N+TH LG +L + +R+ V YG + SR L V A
Sbjct: 519 DGIKLVNVTHFKYLGSILSSDCSMRAELTSRIQAVSCAYGRLRKRVFDSRDLTVPTKIAV 578
Query: 807 WGQDLDTMTTPLECGRTWRV 826
+ Q L M L TW V
Sbjct: 579 YNQCL--MPLLLYGSETWTV 596
>SB_38360| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 387
Score = 31.1 bits (67), Expect = 4.5
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 747 NGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAF 806
+GI+ +N+TH LG +L + +R+ V YG + SR L V A
Sbjct: 162 DGIKLVNVTHFKYLGSILSSDCSMRAELTSRIQAVSCAYGRLRKRVFDSRDLTVPTKIAV 221
Query: 807 WGQDLDTMTTPLECGRTWRV 826
+ Q L M L TW V
Sbjct: 222 YNQCL--MPLLLYGSETWTV 239
>SB_36139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 31.1 bits (67), Expect = 4.5
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 747 NGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAF 806
+GI+ +N+TH LG +L + +R+ V YG + SR L V A
Sbjct: 210 DGIKLVNVTHFKYLGSILSSDCSMRAELTSRIQAVSCAYGRLRKRVFDSRDLTVPTKIAV 269
Query: 807 WGQDLDTMTTPLECGRTWRV 826
+ Q L M L TW V
Sbjct: 270 YNQCL--MPLLLYGSETWTV 287
>SB_32387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 912
Score = 31.1 bits (67), Expect = 4.5
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 747 NGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAF 806
+GI+ +N+TH LG +L + +R+ V YG + SR L V A
Sbjct: 689 DGIKLVNVTHFKYLGSILSSDCSMRAELTSRIQAVSCAYGRLRKRVFDSRDLTVPTKIAV 748
Query: 807 WGQDLDTMTTPLECGRTWRV 826
+ Q L M L TW V
Sbjct: 749 YNQCL--MPLLLYGSETWTV 766
>SB_12170| Best HMM Match : RVT_1 (HMM E-Value=0.58)
Length = 294
Score = 31.1 bits (67), Expect = 4.5
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 747 NGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAF 806
+GI+ +N+TH LG +L + +R+ V YG + SR L V A
Sbjct: 179 DGIKLVNVTHFKYLGSILSSDCSMRAELTSRIQAVSCAYGRLRKRVFDSRDLTVPTKIAV 238
Query: 807 WGQDLDTMTTPLECGRTWRV 826
+ Q L M L TW V
Sbjct: 239 YNQCL--MPLLLYGSETWTV 256
>SB_8476| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 202
Score = 31.1 bits (67), Expect = 4.5
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 747 NGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAF 806
+GI+ +N+TH LG +L + +R+ V YG + SR L V A
Sbjct: 24 DGIKLVNVTHFKYLGSILSSDCSMRAELTSRIQAVSCAYGRLRKRVFDSRDLTVPTKIAV 83
Query: 807 WGQDLDTMTTPLECGRTWRV 826
+ Q L M L TW V
Sbjct: 84 YNQCL--MPLLLYGSETWTV 101
>SB_1360| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 591
Score = 31.1 bits (67), Expect = 4.5
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 747 NGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAF 806
+GI+ +N+TH LG +L + +R+ V YG + SR L V A
Sbjct: 328 DGIKLVNVTHFKYLGSILSSDCSMRAELTSRIQAVSCAYGRLRKRVFDSRDLTVPTKIAV 387
Query: 807 WGQDLDTMTTPLECGRTWRV 826
+ Q L M L TW V
Sbjct: 388 YNQCL--MPLLLYGSETWTV 405
>SB_56412| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 249
Score = 31.1 bits (67), Expect = 4.5
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 747 NGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAF 806
+GI+ +N+TH LG +L + +R+ V YG + SR L V A
Sbjct: 24 DGIKLVNVTHFKYLGSILSSDCSMRAELTSRIQAVSCAYGRLRKRVFDSRDLTVPTKIAV 83
Query: 807 WGQDLDTMTTPLECGRTWRV 826
+ Q L M L TW V
Sbjct: 84 YNQCL--MPLLLYGSETWTV 101
>SB_44220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 31.1 bits (67), Expect = 4.5
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 747 NGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAF 806
+GI+ +N+TH LG +L + +R+ V YG + SR L V A
Sbjct: 210 DGIKLVNVTHFKYLGSILSSDCSMRAELTSRIQAVSCAYGRLRKRVFDSRDLTVPTKIAV 269
Query: 807 WGQDLDTMTTPLECGRTWRV 826
+ Q L M L TW V
Sbjct: 270 YNQCL--MPLLLYGSETWTV 287
>SB_43639| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 249
Score = 31.1 bits (67), Expect = 4.5
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 747 NGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAF 806
+GI+ +N+TH LG +L + +R+ V YG + SR L V A
Sbjct: 24 DGIKLVNVTHFKYLGSILSSDCSMRAELTSRIQAVSCAYGRLRKRVFDSRDLTVPTKIAV 83
Query: 807 WGQDLDTMTTPLECGRTWRV 826
+ Q L M L TW V
Sbjct: 84 YNQCL--MPLLLYGSETWTV 101
>SB_42325| Best HMM Match : RVT_1 (HMM E-Value=0.52)
Length = 333
Score = 31.1 bits (67), Expect = 4.5
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 747 NGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAF 806
+GI+ +N+TH LG +L + +R+ V YG + SR L V A
Sbjct: 179 DGIKLVNVTHFKYLGSILSSDCSMRAELTSRIQAVSCAYGRLRKRVFDSRDLTVPTKIAV 238
Query: 807 WGQDLDTMTTPLECGRTWRV 826
+ Q L M L TW V
Sbjct: 239 YNQCL--MPLLLYGSETWTV 256
>SB_30735| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 249
Score = 31.1 bits (67), Expect = 4.5
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 747 NGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAF 806
+GI+ +N+TH LG +L + +R+ V YG + SR L V A
Sbjct: 24 DGIKLVNVTHFKYLGSILSSDCSMRAELTSRIQAVSCAYGRLRKRVFDSRDLTVPTKIAV 83
Query: 807 WGQDLDTMTTPLECGRTWRV 826
+ Q L M L TW V
Sbjct: 84 YNQCL--MPLLLYGSETWTV 101
>SB_26530| Best HMM Match : RVT_1 (HMM E-Value=0.58)
Length = 359
Score = 31.1 bits (67), Expect = 4.5
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 747 NGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAF 806
+GI+ +N+TH LG +L + +R+ V YG + SR L V A
Sbjct: 179 DGIKLVNVTHFKYLGSILSSDCSMRAELTSRIQAVSCAYGRLRKRVFDSRDLTVPTKIAV 238
Query: 807 WGQDLDTMTTPLECGRTWRV 826
+ Q L M L TW V
Sbjct: 239 YNQCL--MPLLLYGSETWTV 256
>SB_23084| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 249
Score = 31.1 bits (67), Expect = 4.5
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 747 NGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAF 806
+GI+ +N+TH LG +L + +R+ V YG + SR L V A
Sbjct: 24 DGIKLVNVTHFKYLGSILSSDCSMRAELTSRIQAVSCAYGRLRKRVFDSRDLTVPTKIAV 83
Query: 807 WGQDLDTMTTPLECGRTWRV 826
+ Q L M L TW V
Sbjct: 84 YNQCL--MPLLLYGSETWTV 101
>SB_22656| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 249
Score = 31.1 bits (67), Expect = 4.5
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 747 NGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAF 806
+GI+ +N+TH LG +L + +R+ V YG + SR L V A
Sbjct: 24 DGIKLVNVTHFKYLGSILSSDCSMRAELTSRIQAVSCAYGRLRKRVFDSRDLTVPTKIAV 83
Query: 807 WGQDLDTMTTPLECGRTWRV 826
+ Q L M L TW V
Sbjct: 84 YNQCL--MPLLLYGSETWTV 101
>SB_12973| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 203
Score = 31.1 bits (67), Expect = 4.5
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 747 NGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAF 806
+GI+ +N+TH LG +L + +R+ V YG + SR L V A
Sbjct: 24 DGIKLVNVTHFKYLGSILSSDCSMRAELTSRIQAVSCAYGRLRKRVFDSRDLTVPTKIAV 83
Query: 807 WGQDLDTMTTPLECGRTWRV 826
+ Q L M L TW V
Sbjct: 84 YNQCL--MPLLLYGSETWTV 101
>SB_4403| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 280
Score = 31.1 bits (67), Expect = 4.5
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 747 NGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAF 806
+GI+ +N+TH LG +L + +R+ V YG + SR L V A
Sbjct: 69 DGIKLVNVTHFKYLGSILSSDCSMRAELTSRIQAVSCAYGRLRKRVFDSRDLTVPTKIAV 128
Query: 807 WGQDLDTMTTPLECGRTWRV 826
+ Q L M L TW V
Sbjct: 129 YNQCL--MPLLLYGSETWTV 146
>SB_2120| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 235
Score = 31.1 bits (67), Expect = 4.5
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 747 NGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAF 806
+GI+ +N+TH LG +L + +R+ V YG + SR L V A
Sbjct: 56 DGIKLVNVTHFKYLGSILSSDCSMRAELTSRIQAVSCAYGRLRKRVFDSRDLTVPTKIAV 115
Query: 807 WGQDLDTMTTPLECGRTWRV 826
+ Q L M L TW V
Sbjct: 116 YNQCL--MPLLLYGSETWTV 133
>SB_49557| Best HMM Match : RVT_1 (HMM E-Value=0.58)
Length = 404
Score = 30.7 bits (66), Expect = 5.9
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 747 NGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAF 806
+GI+ +N+TH LG +L + +R+ V YG + SR L V A
Sbjct: 179 DGIKLVNVTHFKYLGSILSNDCSMRAELTSRIQAVSCAYGRLRKRVFDSRDLTVPTKIAV 238
Query: 807 WGQDLDTMTTPLECGRTWRV 826
+ Q L M L TW V
Sbjct: 239 YNQCL--MPLLLYGSETWTV 256
>SB_24790| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 226
Score = 30.7 bits (66), Expect = 5.9
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 748 GIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAFW 807
GI+ +N+TH LG +L + +R+ V YG + SR L V A +
Sbjct: 2 GIKLVNVTHFKYLGSILSSDCSMRAELTSRIQAVSCAYGRLRKRVFDSRDLTVPTKIAVY 61
Query: 808 GQDLDTMTTPLECGRTWRV 826
Q L M L TW V
Sbjct: 62 NQCL--MPLLLYGSETWTV 78
>SB_46232| Best HMM Match : TPP_enzyme_M (HMM E-Value=1.3e-24)
Length = 372
Score = 30.3 bits (65), Expect = 7.9
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 16 YRVAGVLNRRFSSRLDALDYEEKLEDCLSVLP-SKAKVVICGGGVMGAAVAYHLANRGWG 74
Y VA RR+ + + +L L +L +K ++I GGGV+ + A LA+ G
Sbjct: 201 YPVA-FFERRYHGQKRPEPDQSELSRALEILSRAKKPLIIAGGGVLYSGAADTLASFA-G 258
Query: 75 DRTVVVEKEKVGAGS-RWHSSGLVGAFKPT 103
+ V + + G GS W+ VGA T
Sbjct: 259 RYAIPVAETQAGKGSLPWNHDCAVGAIGVT 288
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.321 0.139 0.435
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,019,022
Number of Sequences: 59808
Number of extensions: 1487970
Number of successful extensions: 2518
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 2467
Number of HSP's gapped (non-prelim): 48
length of query: 975
length of database: 16,821,457
effective HSP length: 89
effective length of query: 886
effective length of database: 11,498,545
effective search space: 10187710870
effective search space used: 10187710870
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)
- SilkBase 1999-2023 -