GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002019-TA|BGIBMGA002019-PA|IPR002893|Zinc finger,
MYND-type, IPR000770|SAND, IPR010919|SAND-like
         (460 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    26   2.5  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    25   3.3  
AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        25   4.3  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        25   4.3  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        25   4.3  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        25   4.3  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    25   4.3  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          25   5.7  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    24   7.5  

>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 25.8 bits (54), Expect = 2.5
 Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 398 CANCNREASAECS--LCRRTPYCSTYCQK 424
           C  CN+   +  S  +CRR+ YC   C++
Sbjct: 219 CGTCNQITCSGISTEVCRRSCYCGCQCRR 247


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 25.4 bits (53), Expect = 3.3
 Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 317 PNVPDMSAVLKRLDDI---SETLVRLSTELKQCVEDVRRVSARQLERLEQERTSALLAAS 373
           P+ P+M  + + L++    +E+L    T+L+  +E+  R      +R E+E      AA 
Sbjct: 33  PSSPEMLILRQNLEETRKKNESLQEQLTQLRWLMEEKLREQREDAQRREEEARRREEAAK 92

Query: 374 VDDQ 377
            D++
Sbjct: 93  ADNE 96


>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.0 bits (52), Expect = 4.3
 Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 1/26 (3%)

Query: 216 DEGILTPHATSCTCGACCDDQSAMGP 241
           ++ + + H   C CG C  D+S  GP
Sbjct: 32  NDAVCSGHG-QCNCGRCSCDESFFGP 56


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.0 bits (52), Expect = 4.3
 Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 1/26 (3%)

Query: 216 DEGILTPHATSCTCGACCDDQSAMGP 241
           ++ + + H   C CG C  D+S  GP
Sbjct: 32  NDAVCSGHG-QCNCGRCSCDESFFGP 56


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.0 bits (52), Expect = 4.3
 Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 1/26 (3%)

Query: 216 DEGILTPHATSCTCGACCDDQSAMGP 241
           ++ + + H   C CG C  D+S  GP
Sbjct: 32  NDAVCSGHG-QCNCGRCSCDESFFGP 56


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.0 bits (52), Expect = 4.3
 Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 1/26 (3%)

Query: 216 DEGILTPHATSCTCGACCDDQSAMGP 241
           ++ + + H   C CG C  D+S  GP
Sbjct: 32  NDAVCSGHG-QCNCGRCSCDESFFGP 56


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 25.0 bits (52), Expect = 4.3
 Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 1/26 (3%)

Query: 216 DEGILTPHATSCTCGACCDDQSAMGP 241
           ++ + + H   C CG C  D+S  GP
Sbjct: 608 NDAVCSGHG-QCNCGRCSCDESFFGP 632


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 24.6 bits (51), Expect = 5.7
 Identities = 10/37 (27%), Positives = 21/37 (56%)

Query: 90  ICVDNGFISGGPVSDELKATHIVIQNPPSPTRTNCED 126
           + +D+G  S GPV+  ++ + +   + PSP  +  +D
Sbjct: 574 VSMDSGISSSGPVNRRVQGSSVSPSSFPSPQASPQDD 610


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 24.2 bits (50), Expect = 7.5
 Identities = 15/37 (40%), Positives = 16/37 (43%)

Query: 157 NTSAELHKNKFGSGGRGRCIKYGIEWYTPSEFEALCG 193
           NTSAE   N  GSG  G      I W +P      CG
Sbjct: 378 NTSAEGRLNADGSGDHGLFQISDIYWCSPPGNGWACG 414


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.314    0.128    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 460,950
Number of Sequences: 2123
Number of extensions: 17987
Number of successful extensions: 24
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 9
length of query: 460
length of database: 516,269
effective HSP length: 66
effective length of query: 394
effective length of database: 376,151
effective search space: 148203494
effective search space used: 148203494
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 49 (23.8 bits)