Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002019-TA|BGIBMGA002019-PA|IPR002893|Zinc finger,
MYND-type, IPR000770|SAND, IPR010919|SAND-like
(460 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49067-1|CAA88849.2| 376|Caenorhabditis elegans Hypothetical pr... 52 6e-07
Z46794-3|CAA86783.1| 429|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AF003389-8|AAC71131.1| 214|Caenorhabditis elegans Hypothetical ... 45 1e-04
Z70680-2|CAA94573.1| 424|Caenorhabditis elegans Hypothetical pr... 45 1e-04
Z70208-7|CAA94138.1| 183|Caenorhabditis elegans Hypothetical pr... 45 1e-04
Z81089-5|CAB03138.3| 425|Caenorhabditis elegans Hypothetical pr... 41 0.002
Z32683-7|CAA83630.1| 386|Caenorhabditis elegans Hypothetical pr... 39 0.006
AF025458-4|AAB70975.4| 374|Caenorhabditis elegans Hypothetical ... 38 0.015
Z81526-4|CAB04267.2| 430|Caenorhabditis elegans Hypothetical pr... 37 0.034
Z81125-2|CAD56600.1| 507|Caenorhabditis elegans Hypothetical pr... 36 0.045
Z81125-1|CAB03382.1| 501|Caenorhabditis elegans Hypothetical pr... 36 0.045
AC024792-3|AAF60684.2| 388|Caenorhabditis elegans Hypothetical ... 33 0.32
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 33 0.42
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 33 0.42
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 33 0.42
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 33 0.42
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 33 0.42
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 33 0.42
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 32 0.74
Z71180-6|CAI79160.1| 702|Caenorhabditis elegans Hypothetical pr... 32 0.98
Z71180-5|CAD44114.1| 363|Caenorhabditis elegans Hypothetical pr... 32 0.98
Z71180-4|CAA94893.2| 723|Caenorhabditis elegans Hypothetical pr... 32 0.98
U64862-6|AAB52623.3| 560|Caenorhabditis elegans Temporarily ass... 32 0.98
AL021475-7|CAI79248.1| 702|Caenorhabditis elegans Hypothetical ... 32 0.98
AL021475-6|CAD44157.1| 363|Caenorhabditis elegans Hypothetical ... 32 0.98
AL021475-5|CAA16314.2| 723|Caenorhabditis elegans Hypothetical ... 32 0.98
AF178536-1|AAD56365.1| 723|Caenorhabditis elegans EGL-9 protein. 32 0.98
Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z93372-3|CAB07545.1| 601|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z67990-4|CAA91935.1| 369|Caenorhabditis elegans Hypothetical pr... 31 2.3
U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved olig... 30 3.9
U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeo... 30 3.9
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 30 3.9
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 30 3.9
AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox ... 30 3.9
Z83109-11|CAJ43454.1| 345|Caenorhabditis elegans Hypothetical p... 29 5.2
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 29 5.2
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 29 5.2
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 29 5.2
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 29 9.1
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 29 9.1
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 29 9.1
AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical ... 29 9.1
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 29 9.1
AC091124-1|AAK27878.1| 255|Caenorhabditis elegans Hypothetical ... 29 9.1
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 29 9.1
>Z49067-1|CAA88849.2| 376|Caenorhabditis elegans Hypothetical
protein C44F1.2 protein.
Length = 376
Score = 52.4 bits (120), Expect = 6e-07
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query: 138 SARSWTETA--NMPVLPVRCKNTSAELHKNKFGSGG-RGRCIKYGIEWYTPSEFEALCGR 194
S WT N +PV C +H F G R CI+Y ++ TP +F L G+
Sbjct: 61 SEHIWTPIVPLNATTVPVTCGYVKGIMHLKLFRCPGIRQACIEYESQYLTPKQFTELGGK 120
Query: 195 ASSKDWKRSIRFGGRSIQALIDEGILTPHATSCTCGACCDDQSAM 239
KDWK IR S++ L++ + + C C ++ M
Sbjct: 121 GRQKDWKACIRVENVSLRTLLENKTIDFYNHKSICHGQCQSRNYM 165
>Z46794-3|CAA86783.1| 429|Caenorhabditis elegans Hypothetical
protein R06F6.4 protein.
Length = 429
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 389 EDTESKKVQCANCNREASAECSLCRRTPYCSTYCQKKDWASHQIEC 434
+ ES QC E +CS CRR YCS CQ+ DW H++EC
Sbjct: 20 DQVESYCNQCLTSMAELK-KCSACRRLAYCSQECQRADWKLHKVEC 64
>AF003389-8|AAC71131.1| 214|Caenorhabditis elegans Hypothetical
protein F23H11.1 protein.
Length = 214
Score = 45.2 bits (102), Expect = 1e-04
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 336 LVRLSTELKQ-CVEDVRRVSARQLERL--EQERTSALLAASVDDQVDPEQVLL---HNVE 389
LV L+ +L Q + D +++ + L++ E E+T A L + + E L H E
Sbjct: 82 LVELTEKLHQEFMMDQQKIRSELLQQFKDELEQTRADLENKHRENLKMESAKLNEKHKRE 141
Query: 390 DTESKKVQ-CANCNREASAECSLCRRTPYCSTYCQKKDWASHQIECLR 436
S+K Q C +C+ EA C C T YCS CQ+ W +H+ C R
Sbjct: 142 LVASRKKQWCWSCDNEAIYHC--CWNTAYCSVECQQGHWQTHRKFCRR 187
>Z70680-2|CAA94573.1| 424|Caenorhabditis elegans Hypothetical
protein C25G4.4 protein.
Length = 424
Score = 44.8 bits (101), Expect = 1e-04
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Query: 149 PVLPVRCKNTSAELHKNKFGSGGRGR-CIKYGIEWYTPSEFEALCGRASSKDWKRSIRFG 207
P +PV C + ++H N F G + CI+ G + +P +F + KDWK SIR G
Sbjct: 77 PTVPVSCGVVNGKMHLNLFMCPGIHQPCIEVGNDLLSPKQFTIRGDKERQKDWKASIRVG 136
Query: 208 GRSIQALIDEGILTPHATSCTCGACCDDQS 237
S++ ++ + + C C ++
Sbjct: 137 RSSLRTHMEAMTIDFYEHMNRCSGKCQSRN 166
>Z70208-7|CAA94138.1| 183|Caenorhabditis elegans Hypothetical
protein F54B11.6 protein.
Length = 183
Score = 44.8 bits (101), Expect = 1e-04
Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 330 DDISETLVRLSTELKQ-CVEDVRRVSARQLE--RLEQERTSALLAASVDDQVDPEQVLL- 385
D ++LV L+ +L Q +ED RV L ++E ++T L + + E L
Sbjct: 50 DSREKSLVALTEKLHQEFMEDQERVRRDLLVQFKIELDQTKEELEKKHAENLKEEIEKLS 109
Query: 386 --HNVEDTESKKVQ-CANCNREASAECSLCRRTPYCSTYCQKKDWASHQIECLR 436
H E +KK Q C CN EA C C T YCS CQ+ W H+ C R
Sbjct: 110 EKHQRELAVAKKKQWCWQCNSEAIYHC--CWNTAYCSVECQQGHWQIHRKFCRR 161
>Z81089-5|CAB03138.3| 425|Caenorhabditis elegans Hypothetical
protein F53H4.5 protein.
Length = 425
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 181 EWYTPSEFEALCGRASSKDWKRSIRFGGRSIQALIDEGILTPHATSCTCGACCDDQSAMG 240
E+ +P EF + KDWK SIR G +++ L++ L H C A C ++ +
Sbjct: 23 EYISPKEFTVRANKDKQKDWKGSIRIGKSNLRTLMEMRSLDFHDHPNQCSAKCQSRNYIT 82
Query: 241 P 241
P
Sbjct: 83 P 83
>Z32683-7|CAA83630.1| 386|Caenorhabditis elegans Hypothetical
protein R07E5.10 protein.
Length = 386
Score = 39.1 bits (87), Expect = 0.006
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 398 CANCNREASAECSLCRRTPYCSTYCQKKDWASHQIECLRS 437
C C A+ +C+ C+ YCS Q DW +H++EC ++
Sbjct: 146 CRICGCSAAKKCAKCQVARYCSQAHQVIDWPAHKLECAKA 185
>AF025458-4|AAB70975.4| 374|Caenorhabditis elegans Hypothetical
protein C01B12.2 protein.
Length = 374
Score = 37.9 bits (84), Expect = 0.015
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 144 ETANMP-VLPVRCKNTSAELHKNKFGSGG-RGRCIKY---GIEWYTPSEFEALCGRASSK 198
+T +P + ++C A LH F G R +CI+ E TP EF ++ K
Sbjct: 62 QTIKLPKYMELKCGALVARLHTELFICPGIREKCIEVLDCPGELLTPVEFTIKAEKSKQK 121
Query: 199 DWKRSIRFGGRSIQALID 216
DWK +I+ GR ++ L++
Sbjct: 122 DWKGAIKHNGRMLRTLME 139
>Z81526-4|CAB04267.2| 430|Caenorhabditis elegans Hypothetical
protein F33H2.7 protein.
Length = 430
Score = 36.7 bits (81), Expect = 0.034
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 409 CSLCRRTPYCSTYCQKKDWAS-HQIEC 434
C C YC+ CQ+KDW S HQ EC
Sbjct: 41 CDDCLAVSYCTLKCQRKDWKSCHQFEC 67
>Z81125-2|CAD56600.1| 507|Caenorhabditis elegans Hypothetical
protein T22A3.4b protein.
Length = 507
Score = 36.3 bits (80), Expect = 0.045
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Query: 398 CANCNR-----EASAECSLCRRTPYCSTYCQKKDWASHQIECLR 436
CANC R E C C + YCS CQ W H+ EC R
Sbjct: 49 CANCLRGPAPGEKLLRCGGCNFSMYCSKECQATAWLVHKPECKR 92
>Z81125-1|CAB03382.1| 501|Caenorhabditis elegans Hypothetical
protein T22A3.4a protein.
Length = 501
Score = 36.3 bits (80), Expect = 0.045
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Query: 398 CANCNR-----EASAECSLCRRTPYCSTYCQKKDWASHQIECLR 436
CANC R E C C + YCS CQ W H+ EC R
Sbjct: 49 CANCLRGPAPGEKLLRCGGCNFSMYCSKECQATAWLVHKPECKR 92
>AC024792-3|AAF60684.2| 388|Caenorhabditis elegans Hypothetical
protein Y48G1A.3 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.32
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 398 CANCNRE-ASAECSLCRRTPYCSTYCQKKDWASHQIEC 434
C+ C A C+ C+ YCS CQK DW H+ C
Sbjct: 321 CSVCGHPGAKKRCTQCKLA-YCSQECQKFDWPIHKKVC 357
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 33.1 bits (72), Expect = 0.42
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 13 PDITEVSEADPLSTATEHDNERVEGTSVLSTTIKNTRLSNDSNGVVTVPVSLPVGTLIAG 72
P + + + P+ T + H +VEG+ S TIK+ RL + +G + P G
Sbjct: 3315 PSVEWLKDGQPVQTDSSHVIAKVEGSGSYSITIKDARL--EDSGKYACRATNPAGEAKTE 3372
Query: 73 TTFNVITSDHLPHF 86
F V+ + P F
Sbjct: 3373 ANFAVVKNLVPPEF 3386
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 33.1 bits (72), Expect = 0.42
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 13 PDITEVSEADPLSTATEHDNERVEGTSVLSTTIKNTRLSNDSNGVVTVPVSLPVGTLIAG 72
P + + + P+ T + H +VEG+ S TIK+ RL + +G + P G
Sbjct: 2675 PSVEWLKDGQPVQTDSSHVIAKVEGSGSYSITIKDARL--EDSGKYACRATNPAGEAKTE 2732
Query: 73 TTFNVITSDHLPHF 86
F V+ + P F
Sbjct: 2733 ANFAVVKNLVPPEF 2746
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 33.1 bits (72), Expect = 0.42
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 13 PDITEVSEADPLSTATEHDNERVEGTSVLSTTIKNTRLSNDSNGVVTVPVSLPVGTLIAG 72
P + + + P+ T + H +VEG+ S TIK+ RL + +G + P G
Sbjct: 3315 PSVEWLKDGQPVQTDSSHVIAKVEGSGSYSITIKDARL--EDSGKYACRATNPAGEAKTE 3372
Query: 73 TTFNVITSDHLPHF 86
F V+ + P F
Sbjct: 3373 ANFAVVKNLVPPEF 3386
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 33.1 bits (72), Expect = 0.42
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 13 PDITEVSEADPLSTATEHDNERVEGTSVLSTTIKNTRLSNDSNGVVTVPVSLPVGTLIAG 72
P + + + P+ T + H +VEG+ S TIK+ RL + +G + P G
Sbjct: 3315 PSVEWLKDGQPVQTDSSHVIAKVEGSGSYSITIKDARL--EDSGKYACRATNPAGEAKTE 3372
Query: 73 TTFNVITSDHLPHF 86
F V+ + P F
Sbjct: 3373 ANFAVVKNLVPPEF 3386
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 33.1 bits (72), Expect = 0.42
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 13 PDITEVSEADPLSTATEHDNERVEGTSVLSTTIKNTRLSNDSNGVVTVPVSLPVGTLIAG 72
P + + + P+ T + H +VEG+ S TIK+ RL + +G + P G
Sbjct: 2675 PSVEWLKDGQPVQTDSSHVIAKVEGSGSYSITIKDARL--EDSGKYACRATNPAGEAKTE 2732
Query: 73 TTFNVITSDHLPHF 86
F V+ + P F
Sbjct: 2733 ANFAVVKNLVPPEF 2746
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 33.1 bits (72), Expect = 0.42
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 13 PDITEVSEADPLSTATEHDNERVEGTSVLSTTIKNTRLSNDSNGVVTVPVSLPVGTLIAG 72
P + + + P+ T + H +VEG+ S TIK+ RL + +G + P G
Sbjct: 3315 PSVEWLKDGQPVQTDSSHVIAKVEGSGSYSITIKDARL--EDSGKYACRATNPAGEAKTE 3372
Query: 73 TTFNVITSDHLPHF 86
F V+ + P F
Sbjct: 3373 ANFAVVKNLVPPEF 3386
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 32.3 bits (70), Expect = 0.74
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 397 QCANCNREASAECSLCRRTPYCSTYCQKKDWAS--HQIECLRSVPA 440
+C N + A C C YCS CQ +W++ H+ EC + P+
Sbjct: 718 ECGNSKLKLKA-CEECYDAVYCSKECQVANWSTGGHREECSKRKPS 762
>Z71180-6|CAI79160.1| 702|Caenorhabditis elegans Hypothetical
protein F22E12.4d protein.
Length = 702
Score = 31.9 bits (69), Expect = 0.98
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 396 VQCANCNREASAE----CSLCRRTPYCSTYCQKKDWASHQIEC 434
+QC C ++ C C YCS Q+ DW +H++ C
Sbjct: 37 LQCTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLTHKMIC 79
>Z71180-5|CAD44114.1| 363|Caenorhabditis elegans Hypothetical
protein F22E12.4b protein.
Length = 363
Score = 31.9 bits (69), Expect = 0.98
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 396 VQCANCNREASAE----CSLCRRTPYCSTYCQKKDWASHQIEC 434
+QC C ++ C C YCS Q+ DW +H++ C
Sbjct: 37 LQCTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLTHKMIC 79
>Z71180-4|CAA94893.2| 723|Caenorhabditis elegans Hypothetical
protein F22E12.4a protein.
Length = 723
Score = 31.9 bits (69), Expect = 0.98
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 396 VQCANCNREASAE----CSLCRRTPYCSTYCQKKDWASHQIEC 434
+QC C ++ C C YCS Q+ DW +H++ C
Sbjct: 37 LQCTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLTHKMIC 79
>U64862-6|AAB52623.3| 560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 226 protein.
Length = 560
Score = 31.9 bits (69), Expect = 0.98
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Query: 393 SKKVQCANCNRE-ASAECSLCRRTPYCSTYCQKKDWASHQIEC--LRSVPAIHTD 444
+K C C E C C+ +CS C+ H+ EC L+ P ++TD
Sbjct: 36 TKDDYCWTCLGENVELTCEQCKVAKFCSKQCETSGAIDHKYECGPLKKCPDLNTD 90
>AL021475-7|CAI79248.1| 702|Caenorhabditis elegans Hypothetical
protein F22E12.4d protein.
Length = 702
Score = 31.9 bits (69), Expect = 0.98
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 396 VQCANCNREASAE----CSLCRRTPYCSTYCQKKDWASHQIEC 434
+QC C ++ C C YCS Q+ DW +H++ C
Sbjct: 37 LQCTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLTHKMIC 79
>AL021475-6|CAD44157.1| 363|Caenorhabditis elegans Hypothetical
protein F22E12.4b protein.
Length = 363
Score = 31.9 bits (69), Expect = 0.98
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 396 VQCANCNREASAE----CSLCRRTPYCSTYCQKKDWASHQIEC 434
+QC C ++ C C YCS Q+ DW +H++ C
Sbjct: 37 LQCTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLTHKMIC 79
>AL021475-5|CAA16314.2| 723|Caenorhabditis elegans Hypothetical
protein F22E12.4a protein.
Length = 723
Score = 31.9 bits (69), Expect = 0.98
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 396 VQCANCNREASAE----CSLCRRTPYCSTYCQKKDWASHQIEC 434
+QC C ++ C C YCS Q+ DW +H++ C
Sbjct: 37 LQCTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLTHKMIC 79
>AF178536-1|AAD56365.1| 723|Caenorhabditis elegans EGL-9 protein.
Length = 723
Score = 31.9 bits (69), Expect = 0.98
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 396 VQCANCNREASAE----CSLCRRTPYCSTYCQKKDWASHQIEC 434
+QC C ++ C C YCS Q+ DW +H++ C
Sbjct: 37 LQCTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLTHKMIC 79
>Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical
protein ZK1067.7 protein.
Length = 373
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 399 ANCNREASAECSLCRRTPYCSTYCQKKDWASHQIECL-RSVPAIHTDAQQHQSIMLIVES 457
+NCN + S+ CS TP C CQ + Q C + +P+ + +Q+ ++IV
Sbjct: 194 SNCNNQCSSSCS----TPICIQSCQSSCQQACQPTCQPQCMPSCSSSCTSNQAPIVIVAQ 249
Query: 458 Q 458
Q
Sbjct: 250 Q 250
>Z93372-3|CAB07545.1| 601|Caenorhabditis elegans Hypothetical
protein BE10.3 protein.
Length = 601
Score = 31.1 bits (67), Expect = 1.7
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 303 YQILGNPEIKTDPPPNVPDMSAVLKRLDDISETLVRLSTEL--KQCVEDV-RRVSARQLE 359
YQI PEI P NV +S V + + + + L +ST+ K + V + ++ L
Sbjct: 10 YQI---PEILMKPTDNVELISKVFENVKILEKILENVSTDAMGKLDLRLVNKNINIALLR 66
Query: 360 RLEQERTSALLAASVDDQVDPEQVLLHNVED 390
R+ QE L+ + D + D EQ N D
Sbjct: 67 RIRQEHRDVLIRGASDCRFDLEQDAKQNCPD 97
>Z67990-4|CAA91935.1| 369|Caenorhabditis elegans Hypothetical
protein F02D10.4 protein.
Length = 369
Score = 30.7 bits (66), Expect = 2.3
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 273 EVDNIHQSSENSHSKEAWQSIAEGLETTTDYQILGNPEIKTDPPPNVPDMSAV 325
+ D + QSS+ H + + + T+Y+ + N E KTD P SAV
Sbjct: 112 QYDTVDQSSKREHLSQRYGDHVSENNSRTEYKSINNGESKTDRDCCGPSKSAV 164
>U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved
oligomeric golgi (cog)component protein 5 protein.
Length = 580
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 341 TELKQCVEDVRRVSARQLERLEQERTSALLAASVDDQVDPEQ 382
TELK+ +E+ R++S + ++ + QER LAA DD V EQ
Sbjct: 19 TELKEELEN-RQLSTKGVKAVLQERLREALAAQGDDPVVDEQ 59
>U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeobox
protein 14 protein.
Length = 351
Score = 29.9 bits (64), Expect = 3.9
Identities = 25/100 (25%), Positives = 38/100 (38%), Gaps = 6/100 (6%)
Query: 326 LKRLDDISETLVRLSTELKQCVEDVRRVSARQLERLEQERTSALLAASVDDQVDPEQVLL 385
L D++ +V ST L ED V+A E + + D ++ V
Sbjct: 9 LGECDELDNHIVMCSTGLLSPQEDFSNVNAGHPNNEEA------ICSLCDKKIRDRFVSK 62
Query: 386 HNVEDTESKKVQCANCNREASAECSLCRRTPYCSTYCQKK 425
N S ++C+ C E A C L + YC + KK
Sbjct: 63 VNGRCYHSSCLRCSTCKDELGATCFLREDSMYCRAHFYKK 102
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 29.9 bits (64), Expect = 3.9
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 9/70 (12%)
Query: 373 SVDDQVDPEQVLLHNVEDTESKKVQCANCNR--EASA------ECSLCRRTPYCSTYCQK 424
SV QV ++ E V+C C+R E SA C C T YCS C+
Sbjct: 1215 SVMRQVLKSPERAEHILQNEELFVRCTECHRTRELSAARLFFVSCKHCY-TYYCSRECRH 1273
Query: 425 KDWASHQIEC 434
+W +H C
Sbjct: 1274 NNWPNHSGRC 1283
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 29.9 bits (64), Expect = 3.9
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 9/70 (12%)
Query: 373 SVDDQVDPEQVLLHNVEDTESKKVQCANCNR--EASA------ECSLCRRTPYCSTYCQK 424
SV QV ++ E V+C C+R E SA C C T YCS C+
Sbjct: 1256 SVMRQVLKSPERAEHILQNEELFVRCTECHRTRELSAARLFFVSCKHCY-TYYCSRECRH 1314
Query: 425 KDWASHQIEC 434
+W +H C
Sbjct: 1315 NNWPNHSGRC 1324
>AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox
protein CEH-14 protein.
Length = 351
Score = 29.9 bits (64), Expect = 3.9
Identities = 25/100 (25%), Positives = 38/100 (38%), Gaps = 6/100 (6%)
Query: 326 LKRLDDISETLVRLSTELKQCVEDVRRVSARQLERLEQERTSALLAASVDDQVDPEQVLL 385
L D++ +V ST L ED V+A E + + D ++ V
Sbjct: 9 LGECDELDNHIVMCSTGLLSPQEDFSNVNAGHPNNEEA------ICSLCDKKIRDRFVSK 62
Query: 386 HNVEDTESKKVQCANCNREASAECSLCRRTPYCSTYCQKK 425
N S ++C+ C E A C L + YC + KK
Sbjct: 63 VNGRCYHSSCLRCSTCKDELGATCFLREDSMYCRAHFYKK 102
>Z83109-11|CAJ43454.1| 345|Caenorhabditis elegans Hypothetical
protein F44G3.12 protein.
Length = 345
Score = 29.5 bits (63), Expect = 5.2
Identities = 17/75 (22%), Positives = 34/75 (45%)
Query: 343 LKQCVEDVRRVSARQLERLEQERTSALLAASVDDQVDPEQVLLHNVEDTESKKVQCANCN 402
L+ + V+++S +++ E A+ + VD E++ L V +T+ + N
Sbjct: 214 LQNILHTVKQISTKKIILEELYGDEAVSFIKCFEAVDLEEIYLQRVSETKYPLKEIVNLE 273
Query: 403 REASAECSLCRRTPY 417
+ A C + R T Y
Sbjct: 274 QFKRARCFVARGTSY 288
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 125 EDXXXXXXXXRSMSARSWTETANMPVLPVRCKNTSAELHKNKFGSGGRGRCIKYGIEWYT 184
ED R ++ + P++ V +T ELH N + G G Y I++Y+
Sbjct: 513 EDHTSNAQFVRMPDPSNFPSSPTQPII-VNVTDTEVELHWNAPSTSGAGPITGYIIQYYS 571
Query: 185 P 185
P
Sbjct: 572 P 572
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 125 EDXXXXXXXXRSMSARSWTETANMPVLPVRCKNTSAELHKNKFGSGGRGRCIKYGIEWYT 184
ED R ++ + P++ V +T ELH N + G G Y I++Y+
Sbjct: 513 EDHTSNAQFVRMPDPSNFPSSPTQPII-VNVTDTEVELHWNAPSTSGAGPITGYIIQYYS 571
Query: 185 P 185
P
Sbjct: 572 P 572
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 125 EDXXXXXXXXRSMSARSWTETANMPVLPVRCKNTSAELHKNKFGSGGRGRCIKYGIEWYT 184
ED R ++ + P++ V +T ELH N + G G Y I++Y+
Sbjct: 513 EDHTSNAQFVRMPDPSNFPSSPTQPII-VNVTDTEVELHWNAPSTSGAGPITGYIIQYYS 571
Query: 185 P 185
P
Sbjct: 572 P 572
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 417 YCSTYCQKKDWASHQIECLRSVPAIHT-DAQQHQSIMLIVES 457
+C+ +C K +S QI C S +IH D +Q + I IV +
Sbjct: 227 HCAVFCVKFSDSSEQIVCGTSQYSIHVFDVEQRRRIRTIVNA 268
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 417 YCSTYCQKKDWASHQIECLRSVPAIHT-DAQQHQSIMLIVES 457
+C+ +C K +S QI C S +IH D +Q + I IV +
Sbjct: 268 HCAVFCVKFSDSSEQIVCGTSQYSIHVFDVEQRRRIRTIVNA 309
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.7 bits (61), Expect = 9.1
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Query: 332 ISETLVRLSTELKQCVEDVR--RVSARQLERLEQERTSALLAASVDDQVDPEQVLLHNVE 389
+ E V S+EL + R+ A Q ++ E TSA+ D Q D +Q
Sbjct: 603 LEEQAVLDSSELSSTKRQLEHSRLEAIQWRKISDETTSAMQTQLKDHQTDIDQCRHKKKS 662
Query: 390 DTESKKVQCANCNREASAECSLCRRT 415
+ +S ++ N N ++ ++T
Sbjct: 663 EIQSMQLSLDNANARVKESEAMMKKT 688
>AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical
protein Y51H1A.4 protein.
Length = 490
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 329 LDDISETLVRLSTELKQCVEDVRRVSARQLERLEQER 365
LDD E L L ELK+ +++RR+ RL + R
Sbjct: 4 LDDFLEMLDELPAELKERSDEIRRIDNEVESRLNRNR 40
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 28.7 bits (61), Expect = 9.1
Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Query: 7 SDNVVMPDITEVSEADPLSTATEHDNERVEGTSVLSTTIKNTRLSNDSNGVVTVPVSLPV 66
S +P TE + +P +T T E T+ STT + T S ++ +
Sbjct: 250 SSLTAVPGTTEETSTEPETTTTS--TTTTEPTTTTSTTTQTTTTVPTSTSTISTTSTTTT 307
Query: 67 GTLIAGTTFNVITSDHL 83
TT + TSD L
Sbjct: 308 TPTTTTTTTSTTTSDDL 324
>AC091124-1|AAK27878.1| 255|Caenorhabditis elegans Hypothetical
protein Y47A7.2 protein.
Length = 255
Score = 28.7 bits (61), Expect = 9.1
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 338 RLSTELKQCVEDVRRVSARQLERLEQERTSALLAASVDDQ-VDPEQVLLHNVEDTESKKV 396
++S E++ CV + S L + ER A+L + ++P++ + ++ S K
Sbjct: 81 QMSDEIETCVRG-KADSVVGLNEKKNERCQAILKKNAKRAAIEPQK--RRSKKEKNSLKA 137
Query: 397 QCANCNREASAECSLCRRTPYC 418
CN+EA S C R C
Sbjct: 138 AARTCNKEARRLKSQCARLAKC 159
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.7 bits (61), Expect = 9.1
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Query: 332 ISETLVRLSTELKQCVEDVR--RVSARQLERLEQERTSALLAASVDDQVDPEQVLLHNVE 389
+ E V S+EL + R+ A Q ++ E TSA+ D Q D +Q
Sbjct: 603 LEEQAVLDSSELSSTKRQLEHSRLEAIQWRKISDETTSAMQTQLKDHQTDIDQCRHKKKS 662
Query: 390 DTESKKVQCANCNREASAECSLCRRT 415
+ +S ++ N N ++ ++T
Sbjct: 663 EIQSMQLSLDNANARVKESEAMMKKT 688
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.314 0.128 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,190,557
Number of Sequences: 27539
Number of extensions: 455632
Number of successful extensions: 1285
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1241
Number of HSP's gapped (non-prelim): 64
length of query: 460
length of database: 12,573,161
effective HSP length: 84
effective length of query: 376
effective length of database: 10,259,885
effective search space: 3857716760
effective search space used: 3857716760
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 61 (28.7 bits)
- SilkBase 1999-2023 -