Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002017-TA|BGIBMGA002017-PA|IPR001356|Homeobox,
IPR000327|POU-specific, IPR010982|Lambda repressor-like, DNA-binding,
IPR009057|Homeodomain-like
(235 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-... 36 2e-04
M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-... 34 0.001
M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee homeobox-... 33 0.003
M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee homeobox-... 31 0.007
M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 31 0.012
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 31 0.012
AB248729-1|BAF02606.1| 43|Apis mellifera distal-less protein. 30 0.016
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 29 0.028
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 27 0.15
>M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H55. ).
Length = 86
Score = 36.3 bits (80), Expect = 2e-04
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 169 GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKITAIAEKLDLKKNVVRVWFCNQRQKQKR 228
GE KR+RTS + LE F + + IA L L + +++WF N+R K K+
Sbjct: 6 GEVKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 65
>M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E30. ).
Length = 109
Score = 33.9 bits (74), Expect = 0.001
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 170 EKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKITAIAEKLDLKKNVVRVWFCNQRQKQKR 228
E+KR RT+ +A + L+ FA + + ++ L L + +++WF N+R K K+
Sbjct: 19 EEKRPRTAFSAEQLARLKREFAENRYLTERRRQQLSRDLGLTEAQIKIWFQNKRAKIKK 77
>M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E60. ).
Length = 109
Score = 32.7 bits (71), Expect = 0.003
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 170 EKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKITAIAEKLDLKKNVVRVWFCNQRQKQKR 228
E+KR RT+ + + L+ FA + + ++ L L + +++WF N+R K K+
Sbjct: 19 EEKRPRTAFSGEQLARLKREFAENRYLTERRRQQLSRDLGLNEAQIKIWFQNKRAKIKK 77
>M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H17. ).
Length = 79
Score = 31.5 bits (68), Expect = 0.007
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 172 KRKRTSIAAPEKRSLEAYFAVQPRPSGEKITAIAEKLDLKKNVVRVWFCNQRQKQKRMKF 231
++ RT + SLE F + + + + L L + V++WF N+R K KR++
Sbjct: 10 RKPRTPFTTQQLLSLEKKFREKQYLTIAERAEFSSSLHLTETQVKIWFQNRRAKAKRLQE 69
Query: 232 A 232
A
Sbjct: 70 A 70
>M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H90. ).
Length = 74
Score = 30.7 bits (66), Expect = 0.012
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 170 EKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKITAIAEKLDLKKNVVRVWFCNQRQKQKR 228
E+KR R + + LE F + + IA L L + +++WF N+R K K+
Sbjct: 7 ERKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 65
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 30.7 bits (66), Expect = 0.012
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 170 EKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKITAIAEKLDLKKNVVRVWFCNQRQKQKR 228
E+KR R + + LE F + + IA L L + +++WF N+R K K+
Sbjct: 269 ERKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 327
>AB248729-1|BAF02606.1| 43|Apis mellifera distal-less protein.
Length = 43
Score = 30.3 bits (65), Expect = 0.016
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 204 IAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 233
+A L L + V++WF N+R K K+M AA
Sbjct: 14 LAASLGLTQTQVKIWFQNRRSKYKKMMKAA 43
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 29.5 bits (63), Expect = 0.028
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 170 EKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKITAIAEKLDLKKNVVRVWFCNQRQKQKR 228
E +R RT+ + +LE F S + +A L L + V++WF N+R K K+
Sbjct: 7 EARRARTAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 65
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 27.1 bits (57), Expect = 0.15
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 171 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKITAIAEKLDLKKNVVRVWFCNQRQKQKR 228
++R R + + LE F + + IA L L + +++WF N+R K K+
Sbjct: 8 RRRGRQTYTRFQTLELEKEFHYNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 65
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.317 0.131 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,920
Number of Sequences: 429
Number of extensions: 1683
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 235
length of database: 140,377
effective HSP length: 56
effective length of query: 179
effective length of database: 116,353
effective search space: 20827187
effective search space used: 20827187
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 42 (21.0 bits)
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