Silkworm BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002016-TA|BGIBMGA002016-PA|IPR008853|TMEM9
         (97 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-226|AAX52934.1|  263|Drosophila melanogaster CG1161-PB,...    56   7e-09
AY089673-1|AAL90411.1|  227|Drosophila melanogaster RH45888p pro...    54   2e-08
AE014297-227|AAF52042.1|  227|Drosophila melanogaster CG1161-PA,...    54   2e-08
AY061600-1|AAL29148.1| 1189|Drosophila melanogaster SD05384p pro...    26   6.3  
AE013599-2249|AAF58015.2| 1189|Drosophila melanogaster CG8060-PA...    26   6.3  

>AE014297-226|AAX52934.1|  263|Drosophila melanogaster CG1161-PB,
           isoform B protein.
          Length = 263

 Score = 56.0 bits (129), Expect = 7e-09
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 2/91 (2%)

Query: 6   CENVVLPKVSTELKGHELEFCPRCDCHFEIRNXXXXXXXXXXXXXXXXXXFGYMGFLLCL 65
           C   +LP++  +  G EL  C  C C    RN                    YM FL+CL
Sbjct: 100 CAGALLPRL--DANGKELPICAECKCSHVARNTTLIKVVVIIVIWIISILVIYMLFLMCL 157

Query: 66  DPLINKKKVKFYQEHSSEEARTLLMQGEDVE 96
           DPL+NK+    YQEH++E+    L + + ++
Sbjct: 158 DPLLNKRVKANYQEHTNEDVHNKLSRYKGIQ 188


>AY089673-1|AAL90411.1|  227|Drosophila melanogaster RH45888p
           protein.
          Length = 227

 Score = 54.4 bits (125), Expect = 2e-08
 Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 2/79 (2%)

Query: 6   CENVVLPKVSTELKGHELEFCPRCDCHFEIRNXXXXXXXXXXXXXXXXXXFGYMGFLLCL 65
           C   +LP++  +  G EL  C  C C    RN                    YM FL+CL
Sbjct: 100 CAGALLPRL--DANGKELPICAECKCSHVARNTTLIKVVVIIVIWIISILVIYMLFLMCL 157

Query: 66  DPLINKKKVKFYQEHSSEE 84
           DPL+NK+    YQEH++E+
Sbjct: 158 DPLLNKRVKANYQEHTNED 176


>AE014297-227|AAF52042.1|  227|Drosophila melanogaster CG1161-PA,
           isoform A protein.
          Length = 227

 Score = 54.4 bits (125), Expect = 2e-08
 Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 2/79 (2%)

Query: 6   CENVVLPKVSTELKGHELEFCPRCDCHFEIRNXXXXXXXXXXXXXXXXXXFGYMGFLLCL 65
           C   +LP++  +  G EL  C  C C    RN                    YM FL+CL
Sbjct: 100 CAGALLPRL--DANGKELPICAECKCSHVARNTTLIKVVVIIVIWIISILVIYMLFLMCL 157

Query: 66  DPLINKKKVKFYQEHSSEE 84
           DPL+NK+    YQEH++E+
Sbjct: 158 DPLLNKRVKANYQEHTNED 176


>AY061600-1|AAL29148.1| 1189|Drosophila melanogaster SD05384p
           protein.
          Length = 1189

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 2   LHSNCENVVLPKVSTELKGHELEFCPRCDC 31
           L + CE+++L K+S    G  LEF    +C
Sbjct: 786 LQNVCESLILDKISIRKCGEMLEFAAMYNC 815


>AE013599-2249|AAF58015.2| 1189|Drosophila melanogaster CG8060-PA
           protein.
          Length = 1189

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 2   LHSNCENVVLPKVSTELKGHELEFCPRCDC 31
           L + CE+++L K+S    G  LEF    +C
Sbjct: 786 LQNVCESLILDKISIRKCGEMLEFAAMYNC 815


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.323    0.140    0.438 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,970,189
Number of Sequences: 52641
Number of extensions: 96405
Number of successful extensions: 325
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 317
Number of HSP's gapped (non-prelim): 5
length of query: 97
length of database: 24,830,863
effective HSP length: 73
effective length of query: 24
effective length of database: 20,988,070
effective search space: 503713680
effective search space used: 503713680
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 54 (25.8 bits)