GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002016-TA|BGIBMGA002016-PA|IPR008853|TMEM9
         (97 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   0.75 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   3.0  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         20   4.0  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      20   5.3  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    19   9.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    19   9.3  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    19   9.3  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    19   9.3  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 0.75
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 11   LPKVSTELKGHELEFCPRCDCHFEI 35
            LPK  TE++   L+F   C  H  +
Sbjct: 1287 LPKRETEVRKKSLDFGKLCSLHHHL 1311


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 3.0
 Identities = 6/18 (33%), Positives = 10/18 (55%)

Query: 1   MLHSNCENVVLPKVSTEL 18
           ++H  C N  LP++   L
Sbjct: 304 VVHKKCSNFTLPEIQHNL 321


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 20.2 bits (40), Expect = 4.0
 Identities = 7/16 (43%), Positives = 12/16 (75%)

Query: 4  SNCENVVLPKVSTELK 19
          +NC+ V  PK++ E+K
Sbjct: 48 ANCKLVQAPKLNAEVK 63


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 19.8 bits (39), Expect = 5.3
 Identities = 6/10 (60%), Positives = 8/10 (80%)

Query: 63 LCLDPLINKK 72
          +CLDP +N K
Sbjct: 20 MCLDPRLNSK 29


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 11/36 (30%), Positives = 16/36 (44%)

Query: 58  YMGFLLCLDPLINKKKVKFYQEHSSEEARTLLMQGE 93
           YM FLL    L+N +     +E   E    L + G+
Sbjct: 128 YMYFLLGFRYLVNDELSAHSKEIRGENTYILALDGD 163


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 11/36 (30%), Positives = 16/36 (44%)

Query: 58  YMGFLLCLDPLINKKKVKFYQEHSSEEARTLLMQGE 93
           YM FLL    L+N +     +E   E    L + G+
Sbjct: 442 YMYFLLGFRYLVNDELSAHSKEIRGENTYILALDGD 477


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory
          receptor candidate 13 protein.
          Length = 390

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 9/17 (52%), Positives = 10/17 (58%)

Query: 61 FLLCLDPLINKKKVKFY 77
          FLL L  L+    VKFY
Sbjct: 83 FLLKLGQLLGLAPVKFY 99


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory
          receptor candidate 12 protein.
          Length = 316

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 9/17 (52%), Positives = 10/17 (58%)

Query: 61 FLLCLDPLINKKKVKFY 77
          FLL L  L+    VKFY
Sbjct: 9  FLLKLGQLLGLAPVKFY 25


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.140    0.438 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,055
Number of Sequences: 317
Number of extensions: 480
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 97
length of database: 114,650
effective HSP length: 48
effective length of query: 49
effective length of database: 99,434
effective search space:  4872266
effective search space used:  4872266
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.1 bits)
S2: 37 (19.0 bits)