Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002016-TA|BGIBMGA002016-PA|IPR008853|TMEM9
(97 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52053| Best HMM Match : Cytomega_UL20A (HMM E-Value=1.9) 27 3.1
SB_49815| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_9001| Best HMM Match : PHD (HMM E-Value=0.00096) 26 5.4
SB_6668| Best HMM Match : PHD (HMM E-Value=0.00096) 26 5.4
SB_36259| Best HMM Match : PHD (HMM E-Value=5.3e-05) 25 9.5
SB_22901| Best HMM Match : PHD (HMM E-Value=5.3e-05) 25 9.5
SB_21083| Best HMM Match : PHD (HMM E-Value=5.3e-05) 25 9.5
SB_7292| Best HMM Match : RVT_1 (HMM E-Value=0) 25 9.5
SB_39447| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_33045| Best HMM Match : RVT_1 (HMM E-Value=3.4e-18) 25 9.5
SB_24847| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_10962| Best HMM Match : PHD (HMM E-Value=5.3e-05) 25 9.5
SB_9094| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
>SB_52053| Best HMM Match : Cytomega_UL20A (HMM E-Value=1.9)
Length = 493
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 68 LINKKKVKFYQEHSSEEARTLLMQGEDV 95
+++KK++K QE SSEE L++ DV
Sbjct: 94 VLSKKQLKQAQEQSSEETTIALLRTSDV 121
>SB_49815| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 25.8 bits (54), Expect = 5.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 62 LLCLDPLINKKKVKFYQEHSSEEARTLLMQGEDVE 96
LLC DPL+ K+ K + E + L+ ED E
Sbjct: 224 LLCWDPLLKKQFPKEKYAAAKERIKALVQVSEDNE 258
>SB_9001| Best HMM Match : PHD (HMM E-Value=0.00096)
Length = 345
Score = 25.8 bits (54), Expect = 5.4
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 3 HSNCENVVLPKVSTELKGHELEFCPRCDCH 32
H+ C ++ +P + L CP+CD +
Sbjct: 122 HAKCMDISIPSYESLANSSCLWLCPKCDAY 151
>SB_6668| Best HMM Match : PHD (HMM E-Value=0.00096)
Length = 210
Score = 25.8 bits (54), Expect = 5.4
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 3 HSNCENVVLPKVSTELKGHELEFCPRCDCH 32
H+ C ++ +P + L CP+CD +
Sbjct: 122 HAKCMDISIPSYESLANSSCLWLCPKCDAY 151
>SB_36259| Best HMM Match : PHD (HMM E-Value=5.3e-05)
Length = 790
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 3 HSNCENVVLPKVSTELKGHELEFCPRCD 30
H+ C ++ +P + L CP+CD
Sbjct: 118 HAKCMDISIPSYESLANSSCLWLCPKCD 145
>SB_22901| Best HMM Match : PHD (HMM E-Value=5.3e-05)
Length = 696
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 3 HSNCENVVLPKVSTELKGHELEFCPRCD 30
H+ C ++ +P + L CP+CD
Sbjct: 122 HAKCMDISIPSYESLANSSCLWLCPKCD 149
>SB_21083| Best HMM Match : PHD (HMM E-Value=5.3e-05)
Length = 822
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 3 HSNCENVVLPKVSTELKGHELEFCPRCD 30
H+ C ++ +P + L CP+CD
Sbjct: 122 HAKCMDISIPSYESLANSSCLWLCPKCD 149
>SB_7292| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1126
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 3 HSNCENVVLPKVSTELKGHELEFCPRCD 30
H+ C ++ +P + L CP+CD
Sbjct: 104 HAKCMDISIPSYESLANSSCLWLCPKCD 131
>SB_39447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2123
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 3 HSNCENVVLPKVSTELKGHELEFCPRCD 30
H+ C ++ +P + L CP+CD
Sbjct: 1269 HAKCMDISIPSYESLANSSCLWLCPKCD 1296
>SB_33045| Best HMM Match : RVT_1 (HMM E-Value=3.4e-18)
Length = 1061
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 3 HSNCENVVLPKVSTELKGHELEFCPRCD 30
H+ C ++ +P + L CP+CD
Sbjct: 190 HAKCMDISIPSYESLANSSCLWLCPKCD 217
>SB_24847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 913
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 3 HSNCENVVLPKVSTELKGHELEFCPRCD 30
H+ C ++ +P + L CP+CD
Sbjct: 101 HAKCMDISIPSYESLANSSCLWLCPKCD 128
>SB_10962| Best HMM Match : PHD (HMM E-Value=5.3e-05)
Length = 521
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 3 HSNCENVVLPKVSTELKGHELEFCPRCD 30
H+ C ++ +P + L CP+CD
Sbjct: 122 HAKCMDISIPSYESLANSSCLWLCPKCD 149
>SB_9094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 510
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/17 (52%), Positives = 14/17 (82%)
Query: 4 SNCENVVLPKVSTELKG 20
+NC +VV+PKV+ E+ G
Sbjct: 83 NNCSHVVVPKVNEEIWG 99
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.323 0.140 0.438
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,747,647
Number of Sequences: 59808
Number of extensions: 72964
Number of successful extensions: 127
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114
Number of HSP's gapped (non-prelim): 13
length of query: 97
length of database: 16,821,457
effective HSP length: 71
effective length of query: 26
effective length of database: 12,575,089
effective search space: 326952314
effective search space used: 326952314
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 52 (25.0 bits)
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