Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002015-TA|BGIBMGA002015-PA|IPR008381|ACN9
(131 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP23A10.03c |||ACN9 family mitochondrial protein|Schizosacchar... 55 4e-09
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 27 0.72
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 25 2.9
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 25 2.9
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 25 2.9
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 25 2.9
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 25 2.9
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 25 2.9
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 25 2.9
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 25 2.9
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 25 2.9
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 25 2.9
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 25 2.9
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 25 3.8
SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|... 25 5.1
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 24 6.7
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 24 8.9
SPAC17A2.09c |csx1||RNA-binding protein Csx1|Schizosaccharomyces... 24 8.9
>SPBP23A10.03c |||ACN9 family mitochondrial
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 115
Score = 54.8 bits (126), Expect = 4e-09
Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 13 LYKLIFRVHR-GLPPELRVLGDNYARDEFKRHKKCNKDEAKI-FLNEWTDYAINLAKQMK 70
LY+ + R HR L E R LGD Y + EF+RH+ + FL+ W YA L +
Sbjct: 20 LYRRVLRAHRYHLGAEERALGDEYVKAEFRRHRNVTNPLHLVGFLSSWERYADALENES- 78
Query: 71 PLHQAKNKMVGEYLDPSLLDHMSDEQIVQLYELHKA 106
Q K Y + LL+ ++D+QI QLYEL KA
Sbjct: 79 -WKQEK------YSNTDLLESLNDQQIGQLYELSKA 107
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 27.5 bits (58), Expect = 0.72
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 82 EYLDPSLLDHMSDEQIVQLYELHK 105
+YLDPSLLD E + ++ EL K
Sbjct: 1307 KYLDPSLLDFFCSEFVPKITELSK 1330
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 2.9
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 49 DEAKIFLNEWTDYAINLAKQMKPLHQAKNKMVGEYL-DPSLLDHMSDE 95
DE + + D +IN Q+ KN++V EY D LL+ +++E
Sbjct: 834 DETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNE 881
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 2.9
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 49 DEAKIFLNEWTDYAINLAKQMKPLHQAKNKMVGEYL-DPSLLDHMSDE 95
DE + + D +IN Q+ KN++V EY D LL+ +++E
Sbjct: 834 DETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNE 881
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 2.9
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 49 DEAKIFLNEWTDYAINLAKQMKPLHQAKNKMVGEYL-DPSLLDHMSDE 95
DE + + D +IN Q+ KN++V EY D LL+ +++E
Sbjct: 834 DETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNE 881
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 2.9
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 49 DEAKIFLNEWTDYAINLAKQMKPLHQAKNKMVGEYL-DPSLLDHMSDE 95
DE + + D +IN Q+ KN++V EY D LL+ +++E
Sbjct: 834 DETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNE 881
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 2.9
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 49 DEAKIFLNEWTDYAINLAKQMKPLHQAKNKMVGEYL-DPSLLDHMSDE 95
DE + + D +IN Q+ KN++V EY D LL+ +++E
Sbjct: 834 DETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNE 881
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 2.9
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 49 DEAKIFLNEWTDYAINLAKQMKPLHQAKNKMVGEYL-DPSLLDHMSDE 95
DE + + D +IN Q+ KN++V EY D LL+ +++E
Sbjct: 834 DETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNE 881
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 2.9
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 49 DEAKIFLNEWTDYAINLAKQMKPLHQAKNKMVGEYL-DPSLLDHMSDE 95
DE + + D +IN Q+ KN++V EY D LL+ +++E
Sbjct: 834 DETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNE 881
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 2.9
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 49 DEAKIFLNEWTDYAINLAKQMKPLHQAKNKMVGEYL-DPSLLDHMSDE 95
DE + + D +IN Q+ KN++V EY D LL+ +++E
Sbjct: 834 DETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNE 881
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 2.9
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 49 DEAKIFLNEWTDYAINLAKQMKPLHQAKNKMVGEYL-DPSLLDHMSDE 95
DE + + D +IN Q+ KN++V EY D LL+ +++E
Sbjct: 834 DETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNE 881
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 2.9
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 49 DEAKIFLNEWTDYAINLAKQMKPLHQAKNKMVGEYL-DPSLLDHMSDE 95
DE + + D +IN Q+ KN++V EY D LL+ +++E
Sbjct: 834 DETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNE 881
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 2.9
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 49 DEAKIFLNEWTDYAINLAKQMKPLHQAKNKMVGEYL-DPSLLDHMSDE 95
DE + + D +IN Q+ KN++V EY D LL+ +++E
Sbjct: 834 DETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNE 881
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 25.0 bits (52), Expect = 3.8
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 65 LAKQMKPLHQAKNKMVGEYLDPSLLDHMSDEQIVQLY 101
L + +K + KNKM E DP+ L D ++Q Y
Sbjct: 1255 LKRVVKQAEEFKNKMQSEVCDPTQLSE-KDVPLLQFY 1290
>SPBC1826.01c |mot1||TATA-binding protein associated factor
Mot1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1953
Score = 24.6 bits (51), Expect = 5.1
Identities = 10/35 (28%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 60 DYAINLAKQMKPLHQAKNKMVGEYLDPSLLDHMSD 94
+Y+ + +Q+ L +++ + GEYLD S+++ + D
Sbjct: 207 NYSTHYLQQLSNL-KSRLDLAGEYLDDSIMNDLGD 240
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 24.2 bits (50), Expect = 6.7
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 60 DYAINLAKQMKPLHQAKNKMVGEYLDPSLLDH 91
D +++++ PLHQA ++ + D LL +
Sbjct: 957 DLLYEVSRKINPLHQASTRLAIAFPDKRLLQY 988
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 23.8 bits (49), Expect = 8.9
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 26 PELR-VLGDNYARDEFKRHKKCNKDEAKIFLNE 57
P+L+ VLG + RD R K +DE + F +E
Sbjct: 578 PKLKGVLGMKFMRDASNRQKALVQDEMQAFEDE 610
>SPAC17A2.09c |csx1||RNA-binding protein Csx1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 23.8 bits (49), Expect = 8.9
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 57 EWTDYAINLAKQMKPLHQAKNKMVGEYLDPSL 88
E + + +NL ++ P + G+YL PSL
Sbjct: 595 EKSGFGLNLRGRLPPRSYSTFNCTGQYLQPSL 626
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.321 0.136 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 598,975
Number of Sequences: 5004
Number of extensions: 22381
Number of successful extensions: 79
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 74
Number of HSP's gapped (non-prelim): 18
length of query: 131
length of database: 2,362,478
effective HSP length: 66
effective length of query: 65
effective length of database: 2,032,214
effective search space: 132093910
effective search space used: 132093910
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)
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