GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002015-TA|BGIBMGA002015-PA|IPR008381|ACN9
         (131 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    26   0.13 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   2.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   3.7  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 25.8 bits (54), Expect = 0.13
 Identities = 10/15 (66%), Positives = 11/15 (73%)

Query: 53  IFLNEWTDYAINLAK 67
           +FLNEWT   INL K
Sbjct: 118 LFLNEWTKIEINLLK 132


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 4   PEHVSRVRRLYKLIFR--VHRGLPPELRVLGDNYARDEFKRHKKCNKDEAKI 53
           P+H  +   +Y   F   + R + P L      YA+D  K+ ++CN+++  +
Sbjct: 445 PKHTGKNCEIYDRGFPGGLGRAVVPTLDATS-YYAKDLEKQRQQCNQNKCPV 495


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory
          receptor candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)

Query: 72 LHQAKNKMVGEYLDPSLLDHM 92
          LH  KNK  G  L   +LD +
Sbjct: 26 LHSLKNKRSGASLQVGILDSL 46


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.136    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,044
Number of Sequences: 317
Number of extensions: 1118
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 131
length of database: 114,650
effective HSP length: 51
effective length of query: 80
effective length of database: 98,483
effective search space:  7878640
effective search space used:  7878640
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.9 bits)
S2: 39 (19.8 bits)