GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002013-TA|BGIBMGA002013-PA|undefined
         (515 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    25   1.7  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    25   1.7  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    25   1.7  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   3.9  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   3.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   3.9  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    22   8.9  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   8.9  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 7/53 (13%)

Query: 115 EGFDYFTDMMPVLHNYVTVDTN-------AFLSNENHILAMFNMVKAVLNSDA 160
           EGFDYF   M   H +  +D N        F++ ++  + +FN V  +L S A
Sbjct: 188 EGFDYFFGKMSYSHIFSLMDYNIVMALVLQFITLQHTFIWVFNDVFVMLLSTA 240


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 7/53 (13%)

Query: 115 EGFDYFTDMMPVLHNYVTVDTN-------AFLSNENHILAMFNMVKAVLNSDA 160
           EGFDYF   M   H +  +D N        F++ ++  + +FN V  +L S A
Sbjct: 188 EGFDYFFGKMSYSHIFSLMDYNIVMALVLQFITLQHTFIWVFNDVFVMLLSTA 240


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 7/53 (13%)

Query: 115 EGFDYFTDMMPVLHNYVTVDTN-------AFLSNENHILAMFNMVKAVLNSDA 160
           EGFDYF   M   H +  +D N        F++ ++  + +FN V  +L S A
Sbjct: 188 EGFDYFFGKMSYSHIFSLMDYNIVMALVLQFITLQHTFIWVFNDVFVMLLSTA 240


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 11/38 (28%), Positives = 17/38 (44%)

Query: 55  NPEIMAQLEKTVLRVVGHILHHNIIEYYEEAMTLLCNL 92
           N E+  +L K    V  +I+H     Y+E     LC +
Sbjct: 322 NSEVRTELFKLAQHVSANIVHITAGNYFEINKATLCGI 359


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 11/38 (28%), Positives = 17/38 (44%)

Query: 55  NPEIMAQLEKTVLRVVGHILHHNIIEYYEEAMTLLCNL 92
           N E+  +L K    V  +I+H     Y+E     LC +
Sbjct: 322 NSEVRTELFKLAQHVSANIVHITAGNYFEINKATLCGI 359


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 117 FDYFTDMMPVLHNYVTVDTNAFLSN 141
           FD F +M+PV +  V V  N  L N
Sbjct: 656 FDVFRNMLPVRNVSVDVRDNILLKN 680


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 8.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)

Query: 308 ICTLLDMGPQRPNLDEFIPK 327
           IC     G QRP   +F+P+
Sbjct: 26  ICYYASWGAQRPGNGQFVPE 45


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 8.9
 Identities = 10/48 (20%), Positives = 22/48 (45%)

Query: 32  DEKAITAMGLLTTMETVLNVMEDNPEIMAQLEKTVLRVVGHILHHNII 79
           + + I +   +T +  +  +  + PE M +  K+V R+      H I+
Sbjct: 289 EPETIESQDAITRIYAIATMWHETPEEMMEFLKSVFRLDQDQCSHRIV 336


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.134    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,949
Number of Sequences: 317
Number of extensions: 4028
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 8
length of query: 515
length of database: 114,650
effective HSP length: 60
effective length of query: 455
effective length of database: 95,630
effective search space: 43511650
effective search space used: 43511650
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)