Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002013-TA|BGIBMGA002013-PA|undefined
(515 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068719-7|AAO21425.1| 399|Caenorhabditis elegans Uncoordinated... 32 1.1
AF068719-6|AAV58864.1| 457|Caenorhabditis elegans Uncoordinated... 32 1.1
AF068719-5|AAC17781.1| 458|Caenorhabditis elegans Uncoordinated... 32 1.1
Z99273-1|CAB16477.1| 645|Caenorhabditis elegans Hypothetical pr... 31 1.9
Z82256-4|CAB05118.1| 636|Caenorhabditis elegans Hypothetical pr... 31 1.9
Z70687-3|CAM35839.1| 332|Caenorhabditis elegans Hypothetical pr... 31 1.9
AF099927-3|AAZ32795.1| 893|Caenorhabditis elegans Hypothetical ... 30 3.4
AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical ... 30 3.4
Z81073-8|CAB03030.2| 583|Caenorhabditis elegans Hypothetical pr... 29 7.8
Z79752-7|CAC70084.1| 583|Caenorhabditis elegans Hypothetical pr... 29 7.8
AL132951-5|CAC44307.1| 426|Caenorhabditis elegans Hypothetical ... 29 7.8
>AF068719-7|AAO21425.1| 399|Caenorhabditis elegans Uncoordinated
protein 23, isoform b protein.
Length = 399
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 158 SDAEDESEIYAAKLLEVMVLQCAGKIDNCLPSFVELVLNRLTRKVKTSEL 207
++ E E E L E+ V C K++ C +E + +RLT++ KT ++
Sbjct: 249 AELEMEKEQILRSLGEISVHNCMFKLEECDREEIEAITDRLTKRTKTVQV 298
>AF068719-6|AAV58864.1| 457|Caenorhabditis elegans Uncoordinated
protein 23, isoform c protein.
Length = 457
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 158 SDAEDESEIYAAKLLEVMVLQCAGKIDNCLPSFVELVLNRLTRKVKTSEL 207
++ E E E L E+ V C K++ C +E + +RLT++ KT ++
Sbjct: 307 AELEMEKEQILRSLGEISVHNCMFKLEECDREEIEAITDRLTKRTKTVQV 356
>AF068719-5|AAC17781.1| 458|Caenorhabditis elegans Uncoordinated
protein 23, isoform a protein.
Length = 458
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 158 SDAEDESEIYAAKLLEVMVLQCAGKIDNCLPSFVELVLNRLTRKVKTSEL 207
++ E E E L E+ V C K++ C +E + +RLT++ KT ++
Sbjct: 308 AELEMEKEQILRSLGEISVHNCMFKLEECDREEIEAITDRLTKRTKTVQV 357
>Z99273-1|CAB16477.1| 645|Caenorhabditis elegans Hypothetical
protein Y45F10C.1 protein.
Length = 645
Score = 31.1 bits (67), Expect = 1.9
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 156 LNSDAEDESEIYAAKLLEVMVLQCAGKIDNCLPSFVELVLNRLTRKVKTSELRTMLLQVL 215
+N++ E+++ ++ ++ +L K+DN L S +LN L +++ +LR +
Sbjct: 496 VNNNKAQEADVEGSEYPKISMLNVLDKLDNMLISLESELLNELLNEIE--QLRVGPADKM 553
Query: 216 IAI-LYSN--PQLLFSILDKLQEAVPNASI-TQHFIKQWIHDTDCFMGNPQLLFSILDKL 271
I + L+ N +L +I K Q + S + F+K H +M P LL S L K+
Sbjct: 554 IPLKLFINAMESMLQNITGKFQTKDADGSTPAKDFLKTLTHFLK-WMKVP-LLASFLKKV 611
Query: 272 QEAV 275
+E +
Sbjct: 612 EEEI 615
>Z82256-4|CAB05118.1| 636|Caenorhabditis elegans Hypothetical
protein B0513.6 protein.
Length = 636
Score = 31.1 bits (67), Expect = 1.9
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 156 LNSDAEDESEIYAAKLLEVMVLQCAGKIDNCLPSFVELVLNRLTRKVKTSELRTMLLQVL 215
+N++ E+++ ++ ++ +L K+DN L S +LN L +++ +LR +
Sbjct: 487 VNNNKAQEADVEGSEYPKISMLNVLDKLDNMLISLESELLNELLNEIE--QLRVGPADKM 544
Query: 216 IAI-LYSN--PQLLFSILDKLQEAVPNASI-TQHFIKQWIHDTDCFMGNPQLLFSILDKL 271
I + L+ N +L +I K Q + S + F+K H +M P LL S L K+
Sbjct: 545 IPLKLFINAMESMLQNITGKFQTKDADGSTPAKDFLKTLTHFLK-WMKVP-LLASFLKKV 602
Query: 272 QEAV 275
+E +
Sbjct: 603 EEEI 606
>Z70687-3|CAM35839.1| 332|Caenorhabditis elegans Hypothetical
protein T14C1.3 protein.
Length = 332
Score = 31.1 bits (67), Expect = 1.9
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 431 LDDRDCPVDEYVKFKTTLSALSSTEPALYHALTSVLSEDQKK 472
+ D+ +DE VK+KT L + S + +YH +T LS++ K
Sbjct: 252 ITDKIITLDEIVKYKTALQNIHSMQ-KMYHQITCNLSQEDLK 292
>AF099927-3|AAZ32795.1| 893|Caenorhabditis elegans Hypothetical
protein T04C4.1b protein.
Length = 893
Score = 30.3 bits (65), Expect = 3.4
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 7/121 (5%)
Query: 38 AMGLLTTMETVLNVMEDNPEIMAQLEKTVLRVVGHILH-----HNIIEYYEEAMTLLCNL 92
A+G+L ++ +M+ P I A++ + RVV LH NI + +EE +C L
Sbjct: 353 ALGILVPIKQRFFLMQHIPLIEAEMSRFESRVVTAALHPSTFLQNISKSWEELTETVCQL 412
Query: 93 -TAKSISEDMWKVL-ELLYQVFEKEGFDYFTDMMPVLHNYVTVDTNAFLSNENHILAMFN 150
A + W L E + ++ + ++ Y + FLSN L M +
Sbjct: 413 HNAPRLRHPYWLALNEKCHLDGRTLATEFCEQLAYLVRRYDRKEAGYFLSNLVTALLMHH 472
Query: 151 M 151
M
Sbjct: 473 M 473
>AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical
protein T04C4.1a protein.
Length = 955
Score = 30.3 bits (65), Expect = 3.4
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 7/121 (5%)
Query: 38 AMGLLTTMETVLNVMEDNPEIMAQLEKTVLRVVGHILH-----HNIIEYYEEAMTLLCNL 92
A+G+L ++ +M+ P I A++ + RVV LH NI + +EE +C L
Sbjct: 414 ALGILVPIKQRFFLMQHIPLIEAEMSRFESRVVTAALHPSTFLQNISKSWEELTETVCQL 473
Query: 93 -TAKSISEDMWKVL-ELLYQVFEKEGFDYFTDMMPVLHNYVTVDTNAFLSNENHILAMFN 150
A + W L E + ++ + ++ Y + FLSN L M +
Sbjct: 474 HNAPRLRHPYWLALNEKCHLDGRTLATEFCEQLAYLVRRYDRKEAGYFLSNLVTALLMHH 533
Query: 151 M 151
M
Sbjct: 534 M 534
>Z81073-8|CAB03030.2| 583|Caenorhabditis elegans Hypothetical
protein F30F8.2 protein.
Length = 583
Score = 29.1 bits (62), Expect = 7.8
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 38 AMGLLTTMETVLNVMEDNPEIMAQLEKTVLRVVGHILHHNIIEYYEEAMTL 88
A G + T+E VL+ +++P + ++T L H H ++ EEA+T+
Sbjct: 525 AEGDVVTLEYVLSKWQEDPNPCDRYDRTPLDDAKHFNHTACVKLLEEAITV 575
>Z79752-7|CAC70084.1| 583|Caenorhabditis elegans Hypothetical
protein F30F8.2 protein.
Length = 583
Score = 29.1 bits (62), Expect = 7.8
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 38 AMGLLTTMETVLNVMEDNPEIMAQLEKTVLRVVGHILHHNIIEYYEEAMTL 88
A G + T+E VL+ +++P + ++T L H H ++ EEA+T+
Sbjct: 525 AEGDVVTLEYVLSKWQEDPNPCDRYDRTPLDDAKHFNHTACVKLLEEAITV 575
>AL132951-5|CAC44307.1| 426|Caenorhabditis elegans Hypothetical
protein Y67H2A.6 protein.
Length = 426
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 172 LEVMVLQCAGKIDNCLPSFVELVLNRLTRKVKTSE 206
L+V+ L CAG+ DN P L L++LT V+ SE
Sbjct: 95 LQVIGLYCAGEDDNLTPEEKPL-LSKLTNAVRNSE 128
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.134 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,120,847
Number of Sequences: 27539
Number of extensions: 430898
Number of successful extensions: 1136
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1131
Number of HSP's gapped (non-prelim): 11
length of query: 515
length of database: 12,573,161
effective HSP length: 85
effective length of query: 430
effective length of database: 10,232,346
effective search space: 4399908780
effective search space used: 4399908780
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
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