GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002013-TA|BGIBMGA002013-PA|undefined
         (515 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    24   3.5  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               23   6.1  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    23   8.0  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   8.0  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 254 TDCFMGNPQLLFSILDKLQEAVPNASITQHF 284
           T+    +P+   S+  KLQ+ +PN+ I   +
Sbjct: 152 TEASWHSPEAHISVAQKLQKEIPNSIILDQY 182



 Score = 23.4 bits (48), Expect = 4.6
 Identities = 8/27 (29%), Positives = 16/27 (59%)

Query: 220 YSNPQLLFSILDKLQEAVPNASITQHF 246
           + +P+   S+  KLQ+ +PN+ I   +
Sbjct: 156 WHSPEAHISVAQKLQKEIPNSIILDQY 182


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 10/34 (29%), Positives = 19/34 (55%)

Query: 225 LLFSILDKLQEAVPNASITQHFIKQWIHDTDCFM 258
           L F    K+QE +    I++  IK+++ +  CF+
Sbjct: 46  LTFKDFIKMQELLQEEDISEGNIKKYLTNYSCFI 79



 Score = 23.0 bits (47), Expect = 6.1
 Identities = 10/34 (29%), Positives = 19/34 (55%)

Query: 263 LLFSILDKLQEAVPNASITQHFIKQWIHDTDCFM 296
           L F    K+QE +    I++  IK+++ +  CF+
Sbjct: 46  LTFKDFIKMQELLQEEDISEGNIKKYLTNYSCFI 79


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 443 KFKTTLSALSSTEPALYHALTSVLSEDQKKQLSAVFVLAD 482
           K  +TLS L       ++ LT +  E Q+K +   F+  +
Sbjct: 134 KVSSTLSGLEGELKGTFYPLTGMSKETQQKLIDDHFLFKE 173


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 443 KFKTTLSALSSTEPALYHALTSVLSEDQKKQLSAVFVLAD 482
           K  +TLS L       ++ LT +  E Q+K +   F+  +
Sbjct: 150 KVSSTLSGLEGELKGTFYPLTGMSKETQQKLIDDHFLFKE 189


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.134    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,341
Number of Sequences: 429
Number of extensions: 4534
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 6
length of query: 515
length of database: 140,377
effective HSP length: 61
effective length of query: 454
effective length of database: 114,208
effective search space: 51850432
effective search space used: 51850432
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)