GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002012-TA|BGIBMGA002012-PA|IPR001494|Importin-beta,
N-terminal
         (274 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding pr...    25   1.8  
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    24   4.1  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   4.1  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   9.5  
AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory pr...    23   9.5  

>AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP55 protein.
          Length = 156

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 16/49 (32%), Positives = 24/49 (48%)

Query: 209 ALTKYILPLDLITRDAFTKWMVVLRSIMERPVPDTTLQVDEDERMELPW 257
           A  KY   LD   RDAF+  MVV   I+ + + +   +V+      LP+
Sbjct: 83  AYIKYRDELDPTLRDAFSYSMVVCAKIIAKRMNNNIAEVNRMRCSPLPY 131


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor
          22 protein.
          Length = 467

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 3/28 (10%)

Query: 8  EILRATIDPNQRQQAEEQ---LSQIHKI 32
          EI    ++PNQRQQ E++     Q+H++
Sbjct: 12 EIRHQVLNPNQRQQLEDRRRIKEQLHQL 39


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 165 EKRTPLIEAMNLLLPMIYNLIVNLEPD 191
           E   P++E    +   + NLI NL+PD
Sbjct: 649 ESGEPVVENPKQIEEAVMNLITNLQPD 675


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/56 (21%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 156 IKNYEYHISEKRTPLIEAMNLLLPMIYNLIVNL-EPDQSVESILIQKQILKCFYAL 210
           I  +E    +K+  ++E   L +P +Y+ ++N+ +P     ++ + K + K   A+
Sbjct: 499 IDKHEDARRKKKQEVVELFKLEVPGVYDRMINMCQPTHKRYNVAVTKVLGKYMEAI 554


>AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory
           protein protein.
          Length = 299

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 5/67 (7%)

Query: 119 KHDFPERWTQIVDKIHIFLQNPDANSWMGALQCLYQLIKNYEYHISEKRTPLIEAMNLLL 178
           KH  P  +  + +K+ +      ++SW G      +L          KR P  + M   L
Sbjct: 12  KHVIPAMFRDVYEKVEL-----GSDSWQGLNAPTGKLYPWDTQSTYIKRPPFFDGMTREL 66

Query: 179 PMIYNLI 185
           P I N++
Sbjct: 67  PKIGNIV 73


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.139    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 282,710
Number of Sequences: 2123
Number of extensions: 11336
Number of successful extensions: 31
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 28
Number of HSP's gapped (non-prelim): 5
length of query: 274
length of database: 516,269
effective HSP length: 63
effective length of query: 211
effective length of database: 382,520
effective search space: 80711720
effective search space used: 80711720
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 47 (23.0 bits)