Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002011-TA|BGIBMGA002011-PA|undefined
(435 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32883| Best HMM Match : K-box (HMM E-Value=0.032) 33 0.60
SB_49663| Best HMM Match : TolA (HMM E-Value=0.059) 31 1.4
SB_40834| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.2
SB_42154| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_38809| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_37757| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_38432| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.4
SB_13365| Best HMM Match : PKD_channel (HMM E-Value=1.4e-25) 29 7.4
SB_7278| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.4
SB_58622| Best HMM Match : GCV_T (HMM E-Value=6e-17) 29 9.8
SB_52527| Best HMM Match : GKAP (HMM E-Value=0.0019) 29 9.8
SB_40793| Best HMM Match : Toxin_30 (HMM E-Value=9.6) 29 9.8
SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16) 29 9.8
>SB_32883| Best HMM Match : K-box (HMM E-Value=0.032)
Length = 192
Score = 32.7 bits (71), Expect = 0.60
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 260 HDLNDPLVLESVFIDTYEKNINSSFPEFVNEDKDATREQSKNPEMLEIELENQVKEKSDK 319
H+L+ +L SV + E NIN S E +NE D +++ K + L ++K K K
Sbjct: 64 HELDRKCILASVELKGMESNINQSEVEIINE-IDRLKKKYKAVQKSNAILREKLKAKEKK 122
Query: 320 LLK 322
+K
Sbjct: 123 TVK 125
>SB_49663| Best HMM Match : TolA (HMM E-Value=0.059)
Length = 591
Score = 31.5 bits (68), Expect = 1.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 286 EFVNEDKDATREQSKNPEMLEIELENQVKEKSDKLLKKFRPFQIRMKAFKINQQFSL 342
EF+ E KD +Q E L+ L+ Q KE +L + F+ ++ K +Q +L
Sbjct: 203 EFIKEQKDVAVQQKAQQESLKETLQEQEKETIQQLEEDFKAQLNELEVEKAKEQTAL 259
>SB_40834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1299
Score = 30.3 bits (65), Expect = 3.2
Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 284 FPEFVNEDKDATREQSKNPEMLEI----ELENQVKEK-SDKLLKKFRPFQIRMKAFKINQ 338
F F+ EDK AT + S +++ L++ +K+ + LL+++ FQ +++ + +
Sbjct: 807 FERFLEEDKTATPDTSTLLALVQSCDRETLDDALKDPVTITLLRQYDAFQEQVRNGHLGK 866
Query: 339 --QFSLRVIDQTNIYLLFRVGTISLKLNL 365
QF + VID T++ L+ + S L+L
Sbjct: 867 TAQFWMSVIDHTHLVLMLQYSVKSNNLSL 895
>SB_42154| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 29.5 bits (63), Expect = 5.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 282 SSFPEFVNEDKDATREQSKNPEMLEIELENQVKEKSDK 319
SSF +NED D R+ + P+ E E E +E+SD+
Sbjct: 105 SSFAPVLNEDLDEFRDTLQTPDEEENEEEEDDEEESDE 142
>SB_38809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 29.5 bits (63), Expect = 5.6
Identities = 18/31 (58%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 375 VDTESVD---VSQVVTPYDRLPPKSQSVADI 402
VDTE+VD VSQ V D LP KSQS +I
Sbjct: 138 VDTEAVDTKTVSQAVHCQDVLPTKSQSTEEI 168
>SB_37757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 905
Score = 29.5 bits (63), Expect = 5.6
Identities = 20/86 (23%), Positives = 39/86 (45%)
Query: 161 GEVLAEIDETGHGRWFYKNGNVALHHYQAKEKLADQRYVVYGSGESLNGKPVRVSILAAF 220
GE+L + GH + + + AL +Y++ +++D + + ES+ +
Sbjct: 164 GELLLSLVGEGHKQTLLRFVDAALKYYKSSGQISDHEIGLSLAKESIPKSKLLYPGKVCL 223
Query: 221 DYLGNGVVYDDFGNTRLKYNQFEGIV 246
D G +V D G+ R+ EG+V
Sbjct: 224 DGAGRRLVIADTGHHRVIVCSTEGVV 249
>SB_38432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 601
Score = 29.1 bits (62), Expect = 7.4
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 255 TRWKWHDLNDPLVLESVFIDTYEKNINSSFPEFVNEDKDATREQSKNPEMLE 306
TRW HD N L I+ +++++ E NE TRE+ + LE
Sbjct: 174 TRWTQHDSNTKLEKRIDDINDWKRSLERCLAETDNEIALLTREKERTERALE 225
>SB_13365| Best HMM Match : PKD_channel (HMM E-Value=1.4e-25)
Length = 2146
Score = 29.1 bits (62), Expect = 7.4
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 290 EDKDATREQSKNPEMLEIELENQVKEKSDKLLKKFRPFQI-RMKAFKINQQFSLRVIDQT 348
E++DA R+ S EIE++ V E D+LL + F + + + F++ ++ LR+I
Sbjct: 1572 EEQDANRKLSNT----EIEIKTDVGEPPDELLLNEKEFNLKKQELFRVTREI-LRLIVMI 1626
Query: 349 NIYLL 353
+++L
Sbjct: 1627 VLFML 1631
>SB_7278| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 498
Score = 29.1 bits (62), Expect = 7.4
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 15/105 (14%)
Query: 147 FERHREEKIMHYNSGEVLAEIDETGHGRWFYKNGNVALHHYQAKEKLADQRY---VVYGS 203
F RE+ ++ N G V +D+ YKN L + + K AD + +VY S
Sbjct: 222 FGEEREQADVYRNIGAVFKSLDDNSQAMENYKNALCILEKFGEERKQADVYFNIGIVYES 281
Query: 204 ----GESLNGKPVRVSILAAFD--------YLGNGVVYDDFGNTR 236
G+++ + IL F Y G+VY+ G +
Sbjct: 282 LGDNGQAMENYKNALCILDKFGEERKQAGVYYNIGIVYESLGEMK 326
>SB_58622| Best HMM Match : GCV_T (HMM E-Value=6e-17)
Length = 515
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 164 LAEIDETGHGRWFYKNGNVALHHYQAKEKLADQRYVVYGSGESLNGKPVRVS 215
L E+D +G+WF K H +A+E +++ E G+P+R S
Sbjct: 175 LNELDPGRYGKWFTKE----YVHTKARESYGLNNQILHPKMERFRGRPMRTS 222
>SB_52527| Best HMM Match : GKAP (HMM E-Value=0.0019)
Length = 192
Score = 28.7 bits (61), Expect = 9.8
Identities = 10/27 (37%), Positives = 20/27 (74%)
Query: 21 MTQLPSFGKLPTIKVKEKQEVVDLSSE 47
+T+ PSFGK+P + + K+EV ++ ++
Sbjct: 128 LTRQPSFGKVPLTRQRSKEEVKEVEAK 154
>SB_40793| Best HMM Match : Toxin_30 (HMM E-Value=9.6)
Length = 217
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 83 EPIIFKANIDCSDPFTEIIPTSSP 106
EP+IF + DC+DP +IP P
Sbjct: 74 EPLIFASVDDCADPEPSLIPLMDP 97
>SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)
Length = 2352
Score = 28.7 bits (61), Expect = 9.8
Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 9/158 (5%)
Query: 248 DSKIAPFTRWKWHDLNDPLVLESVFIDTYEKNINSSFPEFVNEDKDATREQSKNPEMLEI 307
D I WKW L+D +V E T +K + S F E + +R KN + +
Sbjct: 1221 DLSIKNARTWKWSPLDDAVVNE-----TLQKIVMSCFSENLCVFSGHSRVGYKN--LYDG 1273
Query: 308 ELENQVKEKSDKLLKKFRPFQIRMKAFKINQQFSLRVIDQTNIYLLFRVGTISLKLNLGM 367
E + + F + K + Q F + V +LL V S++L+L
Sbjct: 1274 EYVQLHPSSAINFIGTEPKFLVYEKTLRTTQDFIINVTPIEEAWLLDAVDRNSIQLDLEN 1333
Query: 368 FLVSNEIVDTESVDVSQVVTPYDRLPPKSQSVADIQRV 405
+ EI+ ++ S+ + LP K + + QRV
Sbjct: 1334 --LEEEILRPFTIKCSEKLRRMMLLPSKEKLQSLQQRV 1369
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.134 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,669,366
Number of Sequences: 59808
Number of extensions: 578898
Number of successful extensions: 1447
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1435
Number of HSP's gapped (non-prelim): 18
length of query: 435
length of database: 16,821,457
effective HSP length: 84
effective length of query: 351
effective length of database: 11,797,585
effective search space: 4140952335
effective search space used: 4140952335
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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