GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002011-TA|BGIBMGA002011-PA|undefined
         (435 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   4.0  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    25   5.3  
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         24   9.3  
U50475-1|AAA93477.1|  207|Anopheles gambiae protein ( Anopheles ...    24   9.3  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     24   9.3  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     24   9.3  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     24   9.3  

>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 25.0 bits (52), Expect = 4.0
 Identities = 9/20 (45%), Positives = 14/20 (70%), Gaps = 1/20 (5%)

Query: 257 WKWHDLNDPLVLESVFIDTY 276
           W+WH+L  PL + +V +D Y
Sbjct: 658 WEWHELISPLQMATV-LDKY 676


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 24.6 bits (51), Expect = 5.3
 Identities = 13/43 (30%), Positives = 24/43 (55%)

Query: 365 LGMFLVSNEIVDTESVDVSQVVTPYDRLPPKSQSVADIQRVLF 407
           LG F++   I+DT S+ V+ +V       P++ ++A   R +F
Sbjct: 302 LGKFVLFTMILDTFSICVTVIVLNIHFRSPQTHTMAPWVRTIF 344


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 23.8 bits (49), Expect = 9.3
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 188 QAKEKLADQRYVVYGSGESLNGKPVRVSILAAFDYLGNGVV 228
           Q+ +K  D  Y V+     LN KP   ++    DY G  ++
Sbjct: 478 QSTDKYFD--YAVFARQRRLNHKPFSYTMNVMSDYTGKAII 516


>U50475-1|AAA93477.1|  207|Anopheles gambiae protein ( Anopheles
           gambiae putativearylphorin precursor, mRNA, partial cds.
           ).
          Length = 207

 Score = 23.8 bits (49), Expect = 9.3
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 188 QAKEKLADQRYVVYGSGESLNGKPVRVSILAAFDYLGNGVV 228
           Q+ +K  D  Y V+     LN KP   ++    DY G  ++
Sbjct: 146 QSADKYFD--YAVFARQRRLNHKPFSYTMNVMSDYTGKAII 184


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.8 bits (49), Expect = 9.3
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 188 QAKEKLADQRYVVYGSGESLNGKPVRVSILAAFDYLGNGVV 228
           Q+ +K  D  Y V+     LN KP   ++    DY G  ++
Sbjct: 478 QSTDKYFD--YAVFARQRRLNHKPFSYTMNVMSDYTGKAII 516


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.8 bits (49), Expect = 9.3
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 188 QAKEKLADQRYVVYGSGESLNGKPVRVSILAAFDYLGNGVV 228
           Q+ +K  D  Y V+     LN KP   ++    DY G  ++
Sbjct: 478 QSTDKYFD--YAVFARQRRLNHKPFSYTMNVMSDYTGKAII 516


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.8 bits (49), Expect = 9.3
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 188 QAKEKLADQRYVVYGSGESLNGKPVRVSILAAFDYLGNGVV 228
           Q+ +K  D  Y V+     LN KP   ++    DY G  ++
Sbjct: 478 QSADKYFD--YAVFARQRRLNHKPFSYTMNVMSDYTGKAII 516


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.134    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 413,539
Number of Sequences: 2123
Number of extensions: 17431
Number of successful extensions: 39
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 37
Number of HSP's gapped (non-prelim): 7
length of query: 435
length of database: 516,269
effective HSP length: 66
effective length of query: 369
effective length of database: 376,151
effective search space: 138799719
effective search space used: 138799719
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 49 (23.8 bits)