GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002011-TA|BGIBMGA002011-PA|undefined
         (435 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1204|AAF54559.2| 2762|Drosophila melanogaster CG14692-P...    31   3.1  

>AE014297-1204|AAF54559.2| 2762|Drosophila melanogaster CG14692-PA
            protein.
          Length = 2762

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 9/146 (6%)

Query: 29   KLPTIKVKEKQEVVD-LSSESSLKCGDFEPSKPKDMIQDTKIVPFSFAYEKHNPFEPIIF 87
            KLPT   +++++VV+ +S   +L     EP + K++  D      + +    NP      
Sbjct: 2041 KLPTENRRDEKQVVETISPPINLTQLSAEPKRVKELKSDGFQEIENLSNANFNPKSSTKS 2100

Query: 88   KANIDCS--DPFTEIIPTSSPNVELKKNIDK------NMKIKSDMVQNSDISINIYKMVP 139
               ID    +   +++    P+ E+K  +        N  +K D+V+ S+ ++ I +   
Sbjct: 2101 PDEIDLQPLEQAQKLVEIEKPSEEMKTELTNLSQASPNHPLKDDLVEKSNAALIIQRAFR 2160

Query: 140  ASLEGDWFERHREEKIMHYNSGEVLA 165
              +E   FE   +  I    S  + A
Sbjct: 2161 QYMERRKFENFEDSSIDSITSSRITA 2186


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.317    0.134    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,054,677
Number of Sequences: 52641
Number of extensions: 881800
Number of successful extensions: 2334
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2333
Number of HSP's gapped (non-prelim): 3
length of query: 435
length of database: 24,830,863
effective HSP length: 87
effective length of query: 348
effective length of database: 20,251,096
effective search space: 7047381408
effective search space used: 7047381408
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)