Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002010-TA|BGIBMGA002010-PA|IPR006603|Cystinosin/ERS1p
repeat
(260 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41996-4|AAA83473.1| 238|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U64843-12|AAL08039.1| 492|Caenorhabditis elegans Hypothetical p... 33 0.15
Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 31 0.62
AF016433-6|AAB65391.1| 335|Caenorhabditis elegans Seven tm rece... 31 0.62
AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical ... 31 0.82
Z72502-10|CAE17688.1| 300|Caenorhabditis elegans Hypothetical p... 30 1.9
Z81112-4|CAB03275.1| 317|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z46787-3|CAA86741.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 2.5
U88167-4|AAB42228.3| 452|Caenorhabditis elegans Tetraspanin fam... 29 2.5
AF067211-5|AAW88420.1| 329|Caenorhabditis elegans Serpentine re... 29 2.5
Z70306-1|CAA94322.1| 355|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81127-4|CAB03389.1| 344|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z83237-6|CAE17879.1| 549|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical pr... 28 5.8
AL132904-15|CAC35848.2| 518|Caenorhabditis elegans Hypothetical... 28 5.8
Z81142-8|CAB03508.1| 344|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z48045-5|CAD56564.1| 374|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z48045-4|CAA88102.2| 404|Caenorhabditis elegans Hypothetical pr... 28 7.7
>U41996-4|AAA83473.1| 238|Caenorhabditis elegans Hypothetical
protein F38E1.9 protein.
Length = 238
Score = 54.0 bits (124), Expect = 1e-07
Identities = 46/203 (22%), Positives = 92/203 (45%), Gaps = 15/203 (7%)
Query: 10 IFANALSTMTILSSLFLKVPQIMSIREKRSAEGIYIQAMLMEIIGFTIMSLYNYTNKYNI 69
+ + L L S+ L VPQI+ I+ RSA+GI + L+ ++G + Y+Y + +
Sbjct: 32 VLSRGLGFAITLGSILLFVPQILKIQAARSAQGISAASQLLALVGAIGTASYSYRSGFVF 91
Query: 70 MTYMEYPIILFQVYVMFYFVLKYKNMLNLPIIPVMVASYFASVFGFVMDLLPKQVLSYLV 129
+ + + Q+ ++ + + L + + + S A +G V +P Q L+ +
Sbjct: 92 SGWGDSFFVAVQLVIIILQIFLFSGQTMLSVGFLGIVS--AVAYGVVSKSIPMQTLTAV- 148
Query: 130 VSIYKYTVDILYMPFCTPLSGFAKVTYIYGIIKSGNADAVSLTTWIISVLTNLARVFTVY 189
T I P+ +K+ I ++ + +SL + + LARVFT
Sbjct: 149 -----QTAGI-------PIVVVSKLLQISQNYRAQSTGQLSLISVFLQFAGTLARVFTSV 196
Query: 190 VDSGDGKLLANFIISTLLSSGVF 212
D+GD L+ ++ + +L+ +F
Sbjct: 197 QDTGDMLLIVSYSTAAVLNGLIF 219
>U64843-12|AAL08039.1| 492|Caenorhabditis elegans Hypothetical
protein K06C4.9 protein.
Length = 492
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 84 VMFYFVLKYKNMLNLPIIPVMVASYFASVFGFVMDLLPKQVLSYLVVSIYKYTVDILYMP 143
V Y + + +M+ LPII + + S++ + + + K + +L++S+ T+D++ +
Sbjct: 144 VQSYTLNEVFSMVMLPIILIGLLGNTVSIYVYSRNHMKKNTIGFLLLSLS--TIDLIVLV 201
Query: 144 FCTPLSGFAKVTYIYGIIKSGNADAV 169
P G K + G K G+A +
Sbjct: 202 TALPTFGTYKFPFFPGYNKIGSAHTI 227
>Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical
protein R09H10.5 protein.
Length = 1603
Score = 32.3 bits (70), Expect = 0.36
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 124 VLSYLVVSIYKYTVDILYMPFCTPLSGFAKVTYIYGIIKSGNADAVSLTTWII---SVLT 180
+LS +V++Y+YT + +M + A + Y++ + + ++D L I S
Sbjct: 245 ILSSFIVTVYRYTKSVYFMETSAFTTSDAMIDYLHSVTIAPSSDDQPLLDAIANSQSTQP 304
Query: 181 NLARVFTVYVDSGDGKLLANFIISTLLSS 209
+ TVYV D + L + STLLSS
Sbjct: 305 TMRPKSTVYV-FADSENLLDPTPSTLLSS 332
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 31.5 bits (68), Expect = 0.62
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 114 GFVMDLLPKQVLSYLVVSIYKYTVD--ILYMPFCTPLSGFAKV---TYIY-GIIKSGNAD 167
G++ D + +V S +++YK+ D + FC P+ ++ IY G++ S +
Sbjct: 158 GYIYDYISVRVSSSCPMNVYKFPFDYQTCQIKFCLPIFNSVEIQIFNEIYVGVLMSDLWE 217
Query: 168 AVSLTTWIISVLTNLARVFTVYVDSGDGKL 197
+ + W ++ L+N RV T+ + G G L
Sbjct: 218 TMGNSEWKLTNLSN--RVETLQYNDGFGNL 245
>AF016433-6|AAB65391.1| 335|Caenorhabditis elegans Seven tm
receptor protein 131 protein.
Length = 335
Score = 31.5 bits (68), Expect = 0.62
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 55 FTIMSLYNYTNKYNIMTYMEYPIILFQVYVMFYFVLKYKNMLNLPIIPVMVASYFASVFG 114
+ +++ Y YN + + P+++ + + Y V+ + + N+PI + F S FG
Sbjct: 42 YLMLAFSLYAILYNYVDIITLPLVVIEKQM--YVVVNHGPIRNVPIFGFLFTCLFGSSFG 99
Query: 115 FVMDLLPKQVL-SYLVV 130
+ LL Q YL V
Sbjct: 100 LCISLLSTQFFYRYLAV 116
>AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical
protein Y53G8AM.4 protein.
Length = 309
Score = 31.1 bits (67), Expect = 0.82
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 80 FQVYVMFYFVLKYKNMLNLPIIPVMVASYFASVFGFVMDLLPKQVLSYLVVSIYKYTVDI 139
F VY+ Y KY+ +P++ + FV+ L+ L++ V+S Y I
Sbjct: 126 FHVYITSYKYHKYRAFFRGWFVPIL------NCLNFVLALIFLINLNFNVISFYMVNSLI 179
Query: 140 LYMPFCTPLSGFAKVTYIYGIIKSGN 165
Y+ L F K+ Y + K G+
Sbjct: 180 FYLAITFSLLFFKKIFYAWKRFKQGS 205
>Z72502-10|CAE17688.1| 300|Caenorhabditis elegans Hypothetical
protein C08B6.12 protein.
Length = 300
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 4 VPYLIEIFANALST-MTILSSLFLKVPQIMS-IREKRSAEGIYIQAMLMEIIGFTIMSLY 61
+ Y I IF +S M IL +F+K+ ++ S +R K + I ++++ ++ T LY
Sbjct: 173 ISYFIHIFLPWVSVFMNILVFIFIKLRKMKSQVRRKSGERTLVINSLVVSLL-LTANYLY 231
Query: 62 NY 63
NY
Sbjct: 232 NY 233
>Z81112-4|CAB03275.1| 317|Caenorhabditis elegans Hypothetical
protein T02B5.4 protein.
Length = 317
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Query: 96 LNLPIIPVMVASYFASVFGFVMDLLPKQVLS-YLVVSIYKYTVDILYM--PFCTPLSGFA 152
LN ++ V+ F F F+ + + Y+ V+I +Y V I +M P C+P S
Sbjct: 217 LNARLVKVINFQVFLPTFIFLGFFIFAAMFGRYITVNIAQYLVSIAFMFSPICSPFSYIL 276
Query: 153 KVTYIYGIIKSGNADAVSLTTWIISV 178
V + +I A + T + +V
Sbjct: 277 FVPHYLNVITGNKKPAENRATDMCAV 302
>Z46787-3|CAA86741.1| 1032|Caenorhabditis elegans Hypothetical
protein C16C10.3 protein.
Length = 1032
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 81 QVYVMFYFVLKYKNMLNLPIIPVMVASYFASVFGFVMDLL 120
+V V YF+L+Y L P +P++V+ F F M+LL
Sbjct: 438 EVTVAEYFLLQYNIKLKYPRLPLVVSKRFKHESFFPMELL 477
>U88167-4|AAB42228.3| 452|Caenorhabditis elegans Tetraspanin family
protein 19 protein.
Length = 452
Score = 29.5 bits (63), Expect = 2.5
Identities = 28/125 (22%), Positives = 49/125 (39%), Gaps = 7/125 (5%)
Query: 110 ASVFGFVMDLLPKQVLSYL----VVSIYKYTVDILYMPFCTPLSGFAKVTYIYGIIKSGN 165
A V V+ LL VL L ++ + ++ Y+ F L F + + + + N
Sbjct: 80 ALVIAIVLILLRMSVLLPLYSDSIIGNLSWICEMNYLAFWIALIVFGLIVIQFTVYQCRN 139
Query: 166 ADAVSLTT---WIISVLTNLARVFTVYVDSGDGKLLANFIISTLLSSGVFFTALHYQQQT 222
V ++T +I S++ A + TV + L + L SG YQ +
Sbjct: 140 PTYVVISTSINFIFSIILITALIHTVILKDNKEAFLKEGLHKKTLFSGTMSEMRTYQARM 199
Query: 223 ACCPI 227
CC +
Sbjct: 200 KCCGV 204
>AF067211-5|AAW88420.1| 329|Caenorhabditis elegans Serpentine
receptor, class z protein85, isoform b protein.
Length = 329
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/106 (21%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Query: 39 SAEGIYIQAMLMEIIGFTIMSLYNYTNKYNIMTYMEYPIILFQVYVMFYFVLKYKNMLNL 98
SA + L ++ TI+ Y Y +K N M +P I+ +VM ++ Y +L +
Sbjct: 15 SAHALISFFWLSIMLYLTILPFYLYVHKVNRQLEMTFPSIIHHFFVM--VIMSYVLLLTI 72
Query: 99 PIIPVMVASYFASVFGFVMDLLPKQVLSYLVVSIYKYTVDILYMPF 144
+ ++ S ++ + +P +LS ++I T+ ++ F
Sbjct: 73 FMSCLLTFSTTSTPGETSIFQIPLIILSVTCITIPALTIVVINQMF 118
>Z70306-1|CAA94322.1| 355|Caenorhabditis elegans Hypothetical
protein C06G8.1 protein.
Length = 355
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 11/109 (10%)
Query: 7 LIEIFANALSTMTILSSL---------FLKVPQIMSIREKRSAEGIYIQAMLMEIIGFTI 57
+ EIF S + +LS L F +P I +++ + I LM ++G
Sbjct: 1 MFEIFTQGFSLLNLLSILAFFTTVGLFFCGIPICRQIWKRKDTKEISGAPFLMGVVGGCC 60
Query: 58 MSLYNYTNKYNIMTYME-YPIILFQVYVMFYFVL-KYKNMLNLPIIPVM 104
Y + + ++ +IL+ Y +FY+ + K K ++L ++ V+
Sbjct: 61 WMTYGWLKNDGTVKWVTGCQVILYTTYTIFYWCMTKKKLYISLKVLGVI 109
>Z81127-4|CAB03389.1| 344|Caenorhabditis elegans Hypothetical
protein T22G5.4 protein.
Length = 344
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 43 IYIQAMLMEIIGFTIMSLYNYTNKYNIMTYMEY-PIILFQVYVMFYFVLKYKN 94
IYI + I F ++ Y + N+ NI+ YM Y II + YFV +++
Sbjct: 222 IYIFCWMTSSICFRVL-FYMFENETNIVPYMPYLAIITMPNFCQAYFVTYFRS 273
>Z83237-6|CAE17879.1| 549|Caenorhabditis elegans Hypothetical
protein R06B9.6 protein.
Length = 549
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 10 IFANALSTMTILSSLFLKVPQIMS-IREKRSAE 41
IF +A+ST+ LF K+ ++ S I+ KRSA+
Sbjct: 389 IFISAISTVAYFIFLFFKIARVWSTIKSKRSAQ 421
>Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical
protein F11A10.4 protein.
Length = 1646
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 161 IKSGNADAVSLTTWIISVLTNLARVFTVYVDSGDGKLLANFIISTLLS 208
IK N +VS+ W LT+LA+ S D K IIS+LL+
Sbjct: 795 IKVCNHTSVSMRDWAAVALTSLAKHAVKSKTSMDAKSQQEMIISSLLA 842
>Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical
protein F11A10.4 protein.
Length = 1646
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 161 IKSGNADAVSLTTWIISVLTNLARVFTVYVDSGDGKLLANFIISTLLS 208
IK N +VS+ W LT+LA+ S D K IIS+LL+
Sbjct: 795 IKVCNHTSVSMRDWAAVALTSLAKHAVKSKTSMDAKSQQEMIISSLLA 842
>Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical protein
E03G2.2 protein.
Length = 1503
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 55 FTIMSLYNYTNKYNIMTYMEYPIILFQVYVMFYFVLKY 92
F +M+L N T T + I+ V+++++FVLKY
Sbjct: 1064 FLVMALINMTVLIVSYTTPLFIAIIIPVFIIYFFVLKY 1101
>AL132904-15|CAC35848.2| 518|Caenorhabditis elegans Hypothetical
protein Y111B2A.19 protein.
Length = 518
Score = 28.3 bits (60), Expect = 5.8
Identities = 23/113 (20%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
Query: 68 NIMTYME-YPIILFQVYVMFYFVLKYKNMLNLPIIPVMVASYFASVFGFVMDLLPKQVLS 126
N++ YM+ Y I+ + +F + K L + ++ +FA +FG++ D +++L
Sbjct: 33 NLLNYMDRYTIVGVMSRLATFFDIDDKGQGLLQTVFIVFYMFFAPLFGYLGDRYNRKML- 91
Query: 127 YLVVSIYKYTVDILYMPFCTPLSGFAKVTYIYGIIKSGNADAVSLTTWIISVL 179
++ I + + + FC + GI+ G A ++ ++S L
Sbjct: 92 -MITGICIWILAVFASSFCGE-GHYYLFLLCRGIVGIGEASYSTIAPTVLSDL 142
>Z81142-8|CAB03508.1| 344|Caenorhabditis elegans Hypothetical
protein ZK1037.9 protein.
Length = 344
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 70 MTYMEYPIILFQVYV-MFYF-VLKYKNMLNLPIIPVMVASYFASVFGFVMDLL 120
+TY+ I V + +F+F +L K+M N I +M A+ F +F F+ L+
Sbjct: 35 LTYITPHISFLCVLINLFHFTILTRKSMRNTSINIIMAAAAFCDIFSFIEMLM 87
>Z48045-5|CAD56564.1| 374|Caenorhabditis elegans Hypothetical
protein C41C4.7b protein.
Length = 374
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 29 PQIMSIREKRSAEGIYIQAMLMEIIGFTIMSLYNYTNKYNIMTYMEYPII 78
PQ+ +++S G+ + + ++GF +++N YN EY I+
Sbjct: 146 PQMYLNFKRKSVVGLNFDFLSLNLVGFCAYAIFNLLMYYNSHVKNEYNIV 195
>Z48045-4|CAA88102.2| 404|Caenorhabditis elegans Hypothetical
protein C41C4.7a protein.
Length = 404
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 29 PQIMSIREKRSAEGIYIQAMLMEIIGFTIMSLYNYTNKYNIMTYMEYPII 78
PQ+ +++S G+ + + ++GF +++N YN EY I+
Sbjct: 146 PQMYLNFKRKSVVGLNFDFLSLNLVGFCAYAIFNLLMYYNSHVKNEYNIV 195
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.331 0.144 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,445,775
Number of Sequences: 27539
Number of extensions: 210300
Number of successful extensions: 771
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 762
Number of HSP's gapped (non-prelim): 21
length of query: 260
length of database: 12,573,161
effective HSP length: 80
effective length of query: 180
effective length of database: 10,370,041
effective search space: 1866607380
effective search space used: 1866607380
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 59 (27.9 bits)
- SilkBase 1999-2023 -