Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002010-TA|BGIBMGA002010-PA|IPR006603|Cystinosin/ERS1p
repeat
(260 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g07390.1 68417.m01134 PQ-loop repeat family protein / transme... 52 3e-07
At5g59470.1 68418.m07453 PQ-loop repeat family protein / transme... 51 9e-07
At5g19690.1 68418.m02342 oligosaccharyl transferase STT3 subunit... 31 1.0
At5g02410.1 68418.m00164 DIE2/ALG10 family contains Pfam PF04922... 30 1.8
At5g52860.1 68418.m06561 ABC transporter family protein 29 3.1
At4g25750.1 68417.m03707 ABC transporter family protein Bactroce... 28 7.2
At1g66730.1 68414.m07585 ATP dependent DNA ligase family protein... 28 7.2
At1g05990.1 68414.m00627 calcium-binding protein, putative stron... 28 7.2
>At4g07390.1 68417.m01134 PQ-loop repeat family protein /
transmembrane family protein similar to SP|Q60441
Mannose-P-dolichol utilization defect 1 protein
(Suppressor of Lec15 and Lec35 glycosylation mutation)
{Cricetulus griseus}, Lec35 protein [Cricetulus griseus]
GI:9858721; contains Pfam profile PF04193: PQ loop
repeat
Length = 235
Score = 52.4 bits (120), Expect = 3e-07
Identities = 44/219 (20%), Positives = 90/219 (41%), Gaps = 18/219 (8%)
Query: 7 LIEIFANALSTMTILSSLFLKVPQIMSIREKRSAEGIYIQAMLMEIIGFTIMSLYNYTNK 66
L+ + + L + +S+ +K+PQIM I + +S G+ + A +E++G+TI Y
Sbjct: 26 LLPLISKLLGYCLVAASITVKLPQIMKIVQHKSVRGLSVVAFELEVVGYTISLAYCLHKG 85
Query: 67 YNIMTYMEYPIILFQVYVMFYFVLKYKNMLNLPIIPVMVASYFASVF--GFVMDLLPKQV 124
+ E +L Q ++ + Y PV V ++ + +L Q+
Sbjct: 86 LPFSAFGEMAFLLIQALILVACIYYYSQ-------PVPVTTWIRPLLYCAVAPTVLAGQI 138
Query: 125 LSYLVVSIYKYTVDILYMPFCTPLSGFAKVTYIYGIIKSGNADAVSLTTWIISVLTNLAR 184
L ++Y I FA++ I+ K+ + +S T+ ++ ++ R
Sbjct: 139 NPTLFEALYASQHAIFL---------FARLPQIWKNFKNKSTGELSFLTFFMNFAGSIVR 189
Query: 185 VFTVYVDSGDGKLLANFIISTLLSSGVFFTALHYQQQTA 223
VFT + +L F + + + + L Y + A
Sbjct: 190 VFTSLQEKAPISILTGFALGVVTNGSILTQILLYSKPAA 228
>At5g59470.1 68418.m07453 PQ-loop repeat family protein /
transmembrane family protein similar to SP|Q60441
Mannose-P-dolichol utilization defect 1 protein
(Suppressor of Lec15 and Lec35 glycosylation mutation)
(SL15) {Cricetulus griseus}; contains Pfam profile
PF04193: PQ loop repeat
Length = 239
Score = 50.8 bits (116), Expect = 9e-07
Identities = 41/210 (19%), Positives = 96/210 (45%), Gaps = 15/210 (7%)
Query: 7 LIEIFANALSTMTILSSLFLKVPQIMSIREKRSAEGIYIQAMLMEIIGFTIMSLYNYTNK 66
L+ + + L + +S+ +K+PQIM I + +S +G+ + A +E+IG+TI Y
Sbjct: 26 LLPLISKLLGYFLVAASMTVKLPQIMKIVDNKSVKGLSVVAFELEVIGYTISLAYCLNKD 85
Query: 67 YNIMTYMEYPIILFQVYVMFYFVLKYKNMLNLPIIPVMVASYFASVFGFVMDLLPKQVLS 126
+ E +L Q ++ + + L++ V YFA + ++
Sbjct: 86 LPFSAFGELAFLLIQALILVACIYYFSQPLSVTTW-VKAILYFA----IAPTVFAGKIDP 140
Query: 127 YLVVSIYKYTVDILYMPFCTPLSGFAKVTYIYGIIKSGNADAVSLTTWIISVLTNLARVF 186
+L ++Y + ++++ A++ I+ ++ + +S T +++ LARVF
Sbjct: 141 FLFEALYA-SKHLIFLS--------ARIPQIWKNFRNKSTGQLSFLTCLMNFGGALARVF 191
Query: 187 TVYVDSGDGKLLANFIISTLLSSGVFFTAL 216
T + +L ++S + ++G+ + +
Sbjct: 192 TSIQEKAPLSMLLGIVLS-IFTNGIIMSQI 220
>At5g19690.1 68418.m02342 oligosaccharyl transferase STT3 subunit
family protein similar to SP|P39007 Oligosaccharyl
transferase STT3 subunit {Saccharomyces cerevisiae};
contains Pfam profile PF02516: Oligosaccharyl
transferase STT3 subunit
Length = 779
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 62 NYTNKYNIMTYMEYPIILFQVYVMFYFVLKYKNMLNLPIIPVMVASYFASV-----FGFV 116
+Y ++ +Y + +F + FY +K N +L + +YF V + F+
Sbjct: 161 SYISRSVAGSYDNEAVAIFALIFTFYLYIKTLNTGSLFYATLNALAYFYMVCSWGGYTFI 220
Query: 117 MDLLPKQVLSYLVVSIYKYTVDILYMP 143
++L+P VL +V Y + I Y P
Sbjct: 221 INLIPMHVLLCIVTGRYSPRLYIAYAP 247
>At5g02410.1 68418.m00164 DIE2/ALG10 family contains Pfam PF04922:
DIE2/ALG10 family
Length = 509
Score = 29.9 bits (64), Expect = 1.8
Identities = 33/146 (22%), Positives = 64/146 (43%), Gaps = 16/146 (10%)
Query: 45 IQAMLMEIIGFTIMSLYNYTNKYNIMTYMEYPIILFQVYVMFYFVLKYKNMLNLPIIPVM 104
I ++ + GF + ++ + Y + YP L++ + ++++KY ++PV
Sbjct: 357 ILTLVALVAGFVSVHFFSLAHPYLLADNRHYPFYLWRKIINAHWLMKY------ILVPVY 410
Query: 105 VASYFASVFGFVMDLLPKQVLSYLVVSIYKYTVDILYMPFCTPLSGFAKVTY-IYGIIKS 163
V S+F+ ++ LL K ++ + T +L +P TPL F T Y +
Sbjct: 411 VYSWFS-----ILTLLAKTRRQTWILVYFLATCGVL-VP--TPLIEFRYYTIPFYLFMLH 462
Query: 164 GNADAVSLTTW-IISVLTNLARVFTV 188
+ S TW +I + VFT+
Sbjct: 463 SCVRSSSFATWLLIGTIFVSINVFTM 488
>At5g52860.1 68418.m06561 ABC transporter family protein
Length = 589
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 77 IILFQVYVMFYFVLKYKNMLNLPIIPVMVASYFASVFGFVM-DLLPKQVLSYLVVSIYKY 135
+++ +V+F L + ++ +++A++F F+ + LPK L S+YKY
Sbjct: 452 LLMANSFVLFLSSLAPNYITGTSLVTILLAAFFLFSGYFISKESLPKYWLFMYFFSMYKY 511
Query: 136 TVDIL 140
+D L
Sbjct: 512 ALDAL 516
>At4g25750.1 68417.m03707 ABC transporter family protein Bactrocera
tryoni membrane transporter (white) gene, PID:g3676298
Length = 577
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 77 IILFQVYVMFYFVLKYKNMLNLPIIPVMVASYFASVFGFVM-DLLPKQVLSYLVVSIYKY 135
+++ +V+F L + + +++A++F F+ + LPK L S+YKY
Sbjct: 440 VLMANSFVLFLSSLAPNYIAGTSSVTILLAAFFLFSGYFISKESLPKYWLFMYFFSMYKY 499
Query: 136 TVDIL 140
+D L
Sbjct: 500 ALDAL 504
>At1g66730.1 68414.m07585 ATP dependent DNA ligase family protein
contains Pfam profile: PF01068 ATP dependent DNA ligase
domain
Length = 1417
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/48 (25%), Positives = 27/48 (56%)
Query: 88 FVLKYKNMLNLPIIPVMVASYFASVFGFVMDLLPKQVLSYLVVSIYKY 135
F +++K+ + + ++P S + + F+ L PK+V+ + V I K+
Sbjct: 337 FAVRFKDSMEIHLVPYSEHSNYDELREFIKFLKPKRVIPTVGVDIEKF 384
>At1g05990.1 68414.m00627 calcium-binding protein, putative strong
similarity to calcium-binding protein [Lotus japonicus]
GI:18413495; contains INTERPRO:IPR002048 calcium-binding
EF-hand domain
Length = 150
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 180 TNLARVFTVYVDSGDGKLLANFIISTLLSSGVF 212
T L RVF ++ +GDG + + TL S G++
Sbjct: 4 TELKRVFQMFDKNGDGTITGKELSETLRSLGIY 36
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.331 0.144 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,077,734
Number of Sequences: 28952
Number of extensions: 190906
Number of successful extensions: 574
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 568
Number of HSP's gapped (non-prelim): 10
length of query: 260
length of database: 12,070,560
effective HSP length: 80
effective length of query: 180
effective length of database: 9,754,400
effective search space: 1755792000
effective search space used: 1755792000
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 58 (27.5 bits)
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