GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002010-TA|BGIBMGA002010-PA|IPR006603|Cystinosin/ERS1p
repeat
         (260 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    25   0.76 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.76 
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   2.3  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   5.3  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   5.3  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   5.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.1  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 61  YNYTNKYNIMTYMEYPIILFQVYVMFY 87
           Y + N   +  Y ++ I  FQ+YV+F+
Sbjct: 134 YIFANIMGLEFYKQFAIEYFQMYVLFF 160


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 61  YNYTNKYNIMTYMEYPIILFQVYVMFY 87
           Y + N   +  Y ++ I  FQ+YV+F+
Sbjct: 134 YIFANIMGLEFYKQFAIEYFQMYVLFF 160


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 174 WIISVLTNLARVFTVYVDSGDGKLLANFIISTLLSSGVFFTAL 216
           +II V   +  ++TV  +SG    +  +++S   +   FF +L
Sbjct: 14  FIIFVSLEIYHIYTVVEESGFENFVKTYLVSDFENYVTFFCSL 56


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 12  ANALSTMTILSSLFLKVPQ--IMSIREKRSAEG 42
           +N+ S  T  +SLF+ VP   I+   +K  A+G
Sbjct: 681 SNSASVTTYTTSLFINVPPRWILEPTDKAFAQG 713


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)

Query: 165 NADAVSLTTWIISVLTNL 182
           N  AVSLT +++ + TNL
Sbjct: 48  NIVAVSLTAYMVYITTNL 65


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/24 (29%), Positives = 14/24 (58%)

Query: 78  ILFQVYVMFYFVLKYKNMLNLPII 101
           +LFQ Y ++Y      + + +P+I
Sbjct: 266 VLFQAYYLYYVATGKASFVTVPMI 289


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/24 (29%), Positives = 14/24 (58%)

Query: 78  ILFQVYVMFYFVLKYKNMLNLPII 101
           +LFQ Y ++Y      + + +P+I
Sbjct: 266 VLFQAYYLYYVATGKASFVTVPMI 289


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 36   EKRSAEGIYIQAMLMEIIGFTIMSLY 61
            E ++  G+YI  + +E IGF  +  +
Sbjct: 1266 EDKNEIGVYITYLQLEPIGFVFLIFF 1291


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 36   EKRSAEGIYIQAMLMEIIGFTIMSLY 61
            E ++  G+YI  + +E IGF  +  +
Sbjct: 1266 EDKNEIGVYITYLQLEPIGFVFLIFF 1291


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.331    0.144    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,023
Number of Sequences: 317
Number of extensions: 2590
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 9
length of query: 260
length of database: 114,650
effective HSP length: 56
effective length of query: 204
effective length of database: 96,898
effective search space: 19767192
effective search space used: 19767192
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 42 (21.0 bits)