BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002010-TA|BGIBMGA002010-PA|IPR006603|Cystinosin/ERS1p
repeat
(260 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113399-1|AAM29404.1| 221|Drosophila melanogaster RE09466p pro... 155 4e-38
AE014296-807|AAF47870.2| 221|Drosophila melanogaster CG1265-PB ... 155 4e-38
BT004850-1|AAO45206.1| 252|Drosophila melanogaster RE68138p pro... 66 5e-11
AE014134-829|AAF52190.2| 252|Drosophila melanogaster CG3792-PA ... 66 5e-11
AE014134-1249|ABI31297.1| 260|Drosophila melanogaster CG13784-P... 35 0.098
AY119096-1|AAM50956.1| 397|Drosophila melanogaster LP12305p pro... 34 0.23
AE014297-3263|AAO41592.1| 363|Drosophila melanogaster CG17119-P... 34 0.23
AE014297-3262|AAF56088.2| 397|Drosophila melanogaster CG17119-P... 34 0.23
AE014134-1157|AAF52432.1| 992|Drosophila melanogaster CG11323-P... 30 3.7
BT030418-1|ABO52838.1| 770|Drosophila melanogaster IP17472p pro... 29 4.9
BT029954-1|ABM92828.1| 612|Drosophila melanogaster IP17372p pro... 29 4.9
AE014297-1236|ABI31162.1| 1087|Drosophila melanogaster CG34114-P... 29 4.9
AF045471-1|AAF18569.1| 388|Drosophila melanogaster DNtR protein. 29 6.5
AE013599-3342|AAF46805.1| 585|Drosophila melanogaster CG6698-PA... 29 6.5
>AY113399-1|AAM29404.1| 221|Drosophila melanogaster RE09466p
protein.
Length = 221
Score = 155 bits (377), Expect = 4e-38
Identities = 79/212 (37%), Positives = 126/212 (59%), Gaps = 14/212 (6%)
Query: 10 IFANALSTMTILSSLFLKVPQIMSIREKRSAEGIYIQAMLMEIIGFTIMSLYNYTNKYNI 69
+ A+ LS +T+ S L +KVPQI +IR S++GI + + +E+ +T+M YNYT+ Y+
Sbjct: 20 VVADLLSLITVSSCLVIKVPQINTIRANESSKGISVLGLCLELFSYTVMLSYNYTSGYDF 79
Query: 70 MTYMEYPIILFQVYVMFYFVLKYKNMLNLPIIPVMVASYFASVFGFVMDLLPKQVLSYLV 129
++YMEYP++L Q Y + Y+ KY+++L V+ Y M L P +L +LV
Sbjct: 80 LSYMEYPVLLLQEYALIYYAFKYQDLLGRR-TQVVAILYSIVATLIYMKLFPIIILKFLV 138
Query: 130 VSIYKYTVDILYMPFCTPLSGFAKVTYIYGIIKSGNADAVSLTTWIISVLTNLARVFTVY 189
PFCTP+ +KV + I+++ +A +VS TTW +S TN+ R++TV+
Sbjct: 139 -------------PFCTPIGATSKVLQLLAILRTKDASSVSRTTWALSAFTNMTRIYTVF 185
Query: 190 VDSGDGKLLANFIISTLLSSGVFFTALHYQQQ 221
S D LL+NF+IST LS+ VF A Y+++
Sbjct: 186 FQSHDWMLLSNFLISTFLSASVFTAACVYKKK 217
>AE014296-807|AAF47870.2| 221|Drosophila melanogaster CG1265-PB
protein.
Length = 221
Score = 155 bits (377), Expect = 4e-38
Identities = 79/212 (37%), Positives = 126/212 (59%), Gaps = 14/212 (6%)
Query: 10 IFANALSTMTILSSLFLKVPQIMSIREKRSAEGIYIQAMLMEIIGFTIMSLYNYTNKYNI 69
+ A+ LS +T+ S L +KVPQI +IR S++GI + + +E+ +T+M YNYT+ Y+
Sbjct: 20 VVADLLSLITVSSCLVIKVPQINTIRANESSKGISVLGLCLELFSYTVMLSYNYTSGYDF 79
Query: 70 MTYMEYPIILFQVYVMFYFVLKYKNMLNLPIIPVMVASYFASVFGFVMDLLPKQVLSYLV 129
++YMEYP++L Q Y + Y+ KY+++L V+ Y M L P +L +LV
Sbjct: 80 LSYMEYPVLLLQEYALIYYAFKYQDLLGRR-TQVVAILYSIVATLIYMKLFPIIILKFLV 138
Query: 130 VSIYKYTVDILYMPFCTPLSGFAKVTYIYGIIKSGNADAVSLTTWIISVLTNLARVFTVY 189
PFCTP+ +KV + I+++ +A +VS TTW +S TN+ R++TV+
Sbjct: 139 -------------PFCTPIGATSKVLQLLAILRTKDASSVSRTTWALSAFTNMTRIYTVF 185
Query: 190 VDSGDGKLLANFIISTLLSSGVFFTALHYQQQ 221
S D LL+NF+IST LS+ VF A Y+++
Sbjct: 186 FQSHDWMLLSNFLISTFLSASVFTAACVYKKK 217
>BT004850-1|AAO45206.1| 252|Drosophila melanogaster RE68138p
protein.
Length = 252
Score = 66.1 bits (154), Expect = 5e-11
Identities = 50/222 (22%), Positives = 98/222 (44%), Gaps = 15/222 (6%)
Query: 2 IDVPYLIEIFANALSTMTILSSLFLKVPQIMSIREKRSAEGIYIQAMLMEIIGFTIMSLY 61
+DVP + + L I S+ +KVPQ++ I +S EGI I ++++++ + Y
Sbjct: 28 LDVPCFKALLSKGLGLAIIAGSVLVKVPQVLKILNSKSGEGINIVGVVLDLLAISFHLSY 87
Query: 62 NYTNKYNIMTYMEYPIILFQVYVMFYFVLKYKNMLNLPIIPVMVASYFASVFGFVMDLLP 121
N+ + Y + + + Q + VL + + + Y ++ L P
Sbjct: 88 NFMHGYPFSAWGDSTFLAIQTVTIAVLVLFFNG--RKAQSGLFLVGYVVLMYVLNSGLTP 145
Query: 122 KQVLSYLVVSIYKYTVDILYMPFCTPLSGFAKVTYIYGIIKSGNADAVSLTTWIISVLTN 181
VL +T+ +P L G K++ Y ++G+ +S T I+ +
Sbjct: 146 MSVL---------FTIQSCNIPIL--LVG--KLSQAYTNYQAGSTGQLSAATVIMMFAGS 192
Query: 182 LARVFTVYVDSGDGKLLANFIISTLLSSGVFFTALHYQQQTA 223
+AR+FT ++GD ++ FI ST +S + ++Y + A
Sbjct: 193 VARIFTSIQETGDFMIILTFIASTFANSVILGQLIYYWNKPA 234
>AE014134-829|AAF52190.2| 252|Drosophila melanogaster CG3792-PA
protein.
Length = 252
Score = 66.1 bits (154), Expect = 5e-11
Identities = 50/222 (22%), Positives = 98/222 (44%), Gaps = 15/222 (6%)
Query: 2 IDVPYLIEIFANALSTMTILSSLFLKVPQIMSIREKRSAEGIYIQAMLMEIIGFTIMSLY 61
+DVP + + L I S+ +KVPQ++ I +S EGI I ++++++ + Y
Sbjct: 28 LDVPCFKALLSKGLGLAIIAGSVLVKVPQVLKILNSKSGEGINIVGVVLDLLAISFHLSY 87
Query: 62 NYTNKYNIMTYMEYPIILFQVYVMFYFVLKYKNMLNLPIIPVMVASYFASVFGFVMDLLP 121
N+ + Y + + + Q + VL + + + Y ++ L P
Sbjct: 88 NFMHGYPFSAWGDSTFLAIQTVTIAVLVLFFNG--RKAQSGLFLVGYVVLMYVLNSGLTP 145
Query: 122 KQVLSYLVVSIYKYTVDILYMPFCTPLSGFAKVTYIYGIIKSGNADAVSLTTWIISVLTN 181
VL +T+ +P L G K++ Y ++G+ +S T I+ +
Sbjct: 146 MSVL---------FTIQSCNIPIL--LVG--KLSQAYTNYQAGSTGQLSAATVIMMFAGS 192
Query: 182 LARVFTVYVDSGDGKLLANFIISTLLSSGVFFTALHYQQQTA 223
+AR+FT ++GD ++ FI ST +S + ++Y + A
Sbjct: 193 VARIFTSIQETGDFMIILTFIASTFANSVILGQLIYYWNKPA 234
>AE014134-1249|ABI31297.1| 260|Drosophila melanogaster CG13784-PC,
isoform C protein.
Length = 260
Score = 35.1 bits (77), Expect = 0.098
Identities = 14/82 (17%), Positives = 44/82 (53%)
Query: 14 ALSTMTILSSLFLKVPQIMSIREKRSAEGIYIQAMLMEIIGFTIMSLYNYTNKYNIMTYM 73
A ++ ++ + VPQ + I++ + AEG + L ++ ++ L+ ++++Y + +
Sbjct: 20 AAASAMVIGGVIPYVPQYIEIKKTQDAEGFSLYVCLALLVANSLRILFWFSSRYELPLLV 79
Query: 74 EYPIILFQVYVMFYFVLKYKNM 95
+ ++ +++M + +K K +
Sbjct: 80 QSVVMNVTMFLMIHLCVKVKRV 101
>AY119096-1|AAM50956.1| 397|Drosophila melanogaster LP12305p
protein.
Length = 397
Score = 33.9 bits (74), Expect = 0.23
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 29 PQIMSIREKRSAEGIYIQAMLMEIIGFTIMSLYN 62
PQI S ++S EG+ + + I+GFT+ S++N
Sbjct: 149 PQIWSNYRRKSVEGLNFDFLALNIVGFTLYSMFN 182
>AE014297-3263|AAO41592.1| 363|Drosophila melanogaster CG17119-PB,
isoform B protein.
Length = 363
Score = 33.9 bits (74), Expect = 0.23
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 29 PQIMSIREKRSAEGIYIQAMLMEIIGFTIMSLYN 62
PQI S ++S EG+ + + I+GFT+ S++N
Sbjct: 149 PQIWSNYRRKSVEGLNFDFLALNIVGFTLYSMFN 182
>AE014297-3262|AAF56088.2| 397|Drosophila melanogaster CG17119-PA,
isoform A protein.
Length = 397
Score = 33.9 bits (74), Expect = 0.23
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 29 PQIMSIREKRSAEGIYIQAMLMEIIGFTIMSLYN 62
PQI S ++S EG+ + + I+GFT+ S++N
Sbjct: 149 PQIWSNYRRKSVEGLNFDFLALNIVGFTLYSMFN 182
>AE014134-1157|AAF52432.1| 992|Drosophila melanogaster CG11323-PA
protein.
Length = 992
Score = 29.9 bits (64), Expect = 3.7
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 31 IMSIREKRSAEGIYIQAMLMEIIGFTIMSLYNYTNKYNIMTYMEYPIILFQ 81
I+ K GI + L +I+G +S+ + ++Y + Y+E P+ILFQ
Sbjct: 419 IVKPANKCRGRGIILMDNLKKILGVVNLSIAS-KSRYVVQKYIERPLILFQ 468
>BT030418-1|ABO52838.1| 770|Drosophila melanogaster IP17472p
protein.
Length = 770
Score = 29.5 bits (63), Expect = 4.9
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 156 YIYGIIKSGNADAVSLTTWIISVLTNLARVFTVYVDSGDGKLLANFIISTLLSSGVF 212
Y+Y + G +DA++L + + T Y G + NF ++ +LS G+F
Sbjct: 622 YVYAVNGRGRSDAIALDGYTLKAAEKQTVALTSY--KGSAQSPDNFELTPILSIGIF 676
>BT029954-1|ABM92828.1| 612|Drosophila melanogaster IP17372p
protein.
Length = 612
Score = 29.5 bits (63), Expect = 4.9
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 156 YIYGIIKSGNADAVSLTTWIISVLTNLARVFTVYVDSGDGKLLANFIISTLLSSGVF 212
Y+Y + G +DA++L + + T Y G + NF ++ +LS G+F
Sbjct: 137 YVYAVNGRGRSDAIALDGYTLKAAEKQTVALTSY--KGSAQSPDNFELTPILSIGIF 191
>AE014297-1236|ABI31162.1| 1087|Drosophila melanogaster CG34114-PB
protein.
Length = 1087
Score = 29.5 bits (63), Expect = 4.9
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 156 YIYGIIKSGNADAVSLTTWIISVLTNLARVFTVYVDSGDGKLLANFIISTLLSSGVF 212
Y+Y + G +DA++L + + T Y G + NF ++ +LS G+F
Sbjct: 612 YVYAVNGRGRSDAIALDGYTLKAAEKQTVALTSY--KGSAQSPDNFELTPILSIGIF 666
>AF045471-1|AAF18569.1| 388|Drosophila melanogaster DNtR protein.
Length = 388
Score = 29.1 bits (62), Expect = 6.5
Identities = 14/63 (22%), Positives = 33/63 (52%)
Query: 46 QAMLMEIIGFTIMSLYNYTNKYNIMTYMEYPIILFQVYVMFYFVLKYKNMLNLPIIPVMV 105
+ M+ ++ G + N+ MT P+I Q++++ FVL+ +L +I +++
Sbjct: 213 KGMMQKMTGDVAIEFTLQRNRSFYMTVFYLPLIACQMFLILSFVLRSTRRSSLILIALLI 272
Query: 106 ASY 108
A++
Sbjct: 273 AAW 275
>AE013599-3342|AAF46805.1| 585|Drosophila melanogaster CG6698-PA
protein.
Length = 585
Score = 29.1 bits (62), Expect = 6.5
Identities = 14/63 (22%), Positives = 33/63 (52%)
Query: 46 QAMLMEIIGFTIMSLYNYTNKYNIMTYMEYPIILFQVYVMFYFVLKYKNMLNLPIIPVMV 105
+ M+ ++ G + N+ MT P+I Q++++ FVL+ +L +I +++
Sbjct: 410 KGMMQKMTGDVAIEFTLQRNRSFYMTVFYLPLIACQMFLILSFVLRSTRRSSLILIALLI 469
Query: 106 ASY 108
A++
Sbjct: 470 AAW 472
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.331 0.144 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,095,046
Number of Sequences: 52641
Number of extensions: 366656
Number of successful extensions: 1031
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1017
Number of HSP's gapped (non-prelim): 14
length of query: 260
length of database: 24,830,863
effective HSP length: 83
effective length of query: 177
effective length of database: 20,461,660
effective search space: 3621713820
effective search space used: 3621713820
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 61 (28.7 bits)
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