Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002009-TA|BGIBMGA002009-PA|undefined
(200 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 30 0.041
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 29 0.072
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 29 0.072
AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 29 0.072
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 28 0.17
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 28 0.17
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 26 0.68
AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein p... 26 0.68
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 25 1.6
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 30.3 bits (65), Expect = 0.041
Identities = 12/61 (19%), Positives = 34/61 (55%)
Query: 128 EQQLREARATIARLTQVNQNSLSEIEKREKRAMERKLSEMEEELKYQQALQAENQRLKDE 187
+QQ + + + Q Q + +++++R +R+ + +++ ++QQ Q + QR++ +
Sbjct: 224 QQQQQHQQREQQQQQQQQQQQQQQQQQQQQRNQQREWQQQQQQQQHQQREQQQQQRVQQQ 283
Query: 188 N 188
N
Sbjct: 284 N 284
Score = 23.4 bits (48), Expect = 4.8
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 143 QVNQNSLSEIEKREKRAMERKLSEMEEELKYQQALQAENQR 183
Q Q ++RE + +++ + E + QQ +Q +NQ+
Sbjct: 246 QQQQQQQQRNQQREWQQQQQQQQHQQREQQQQQRVQQQNQQ 286
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 29.5 bits (63), Expect = 0.072
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 107 KALYEASASEVRRLRSLLTTSEQQLR---EARATIARLTQVNQNSLSEIEKREKRAMERK 163
+ L + A + R + SE+ R +AR L + N++ LS++E+R K+A+E +
Sbjct: 389 RTLQDVQAKQAAIERGMRNASERVTRIQKDARQIEQDLQERNRDGLSQVEQR-KQAVETE 447
Query: 164 LSEMEEELKYQQALQAENQRLKD 186
++++E ++ A QR D
Sbjct: 448 KAQLKERNDELASMIASAQREVD 470
Score = 29.1 bits (62), Expect = 0.096
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 105 DYKALYEASASEVRRLRSLLTTSEQQLREARATIARLTQVNQNSLSEIE--KREKRAMER 162
D + A E+++LR+ + E ++R A +A+ ++IE K+E A++
Sbjct: 323 DQEEQLAAVDDELKKLRTSIEEQEHRIRNREALVAKTDSTIDTYRADIESKKQEYVALKE 382
Query: 163 KLSEMEEELKYQQALQAENQR 183
+ L+ QA QA +R
Sbjct: 383 AYGTVRRTLQDVQAKQAAIER 403
Score = 29.1 bits (62), Expect = 0.096
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 107 KALYEASASEVRRLRSLLTTSEQQ---LREARATIARLTQVNQNSLSEIEKREKRAMERK 163
+AL + S + R+ + + +Q+ L+EA T+ R Q Q + IE+ + A ER
Sbjct: 353 EALVAKTDSTIDTYRADIESKKQEYVALKEAYGTVRRTLQDVQAKQAAIERGMRNASERV 412
Query: 164 LSEMEEELKYQQALQAENQ 182
++ + +Q LQ N+
Sbjct: 413 TRIQKDARQIEQDLQERNR 431
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 29.5 bits (63), Expect = 0.072
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 128 EQQLREARATIARLTQVNQNSLSEIEKREKRAMERKLSEMEEELKYQQALQAENQRLKD 186
EQ+ RE R R + + E ++REK ER+ E E E + + + E +R ++
Sbjct: 476 EQREREQREKEQREKEQREKEERERQQREKEQREREQREKEREREAARERERERERERE 534
Score = 29.1 bits (62), Expect = 0.096
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 111 EASASEVRRLRSLLTTSEQQLREARATIARLTQVNQNSLSEIEKREKRAMERKLSEMEEE 170
E A E R ++ E++LRE R R + + E E+RE++ E++ E E+
Sbjct: 455 EERAREAREA-AIEREKERELREQREREQREKEQREKEQREKEERERQQREKEQREREQR 513
Query: 171 LKYQQALQAENQRLKDE 187
K ++ A + + E
Sbjct: 514 EKEREREAARERERERE 530
Score = 27.1 bits (57), Expect = 0.39
Identities = 17/75 (22%), Positives = 32/75 (42%)
Query: 112 ASASEVRRLRSLLTTSEQQLREARATIARLTQVNQNSLSEIEKREKRAMERKLSEMEEEL 171
A E R R + ++ +E R + + E E+REK ER+ E E+
Sbjct: 450 ARLREEERAREAREAAIEREKERELREQREREQREKEQREKEQREKEERERQQREKEQRE 509
Query: 172 KYQQALQAENQRLKD 186
+ Q+ + E + ++
Sbjct: 510 REQREKEREREAARE 524
>AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein.
Length = 615
Score = 29.5 bits (63), Expect = 0.072
Identities = 16/79 (20%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 106 YKALYEASASEVRRLRSLLTTSEQQLRE-ARATIARLTQVNQNSLSEI-EKREKRAMERK 163
++ +++ S + +L E++ RE R ++T +N++ I +K+E + R
Sbjct: 83 WEQMWKKVVSPAEKETEVLCQQEREFREYLRNGSKKMTSTWENTVQNIRDKKEAERLRRD 142
Query: 164 LSEMEEELKYQQALQAENQ 182
+++EE+ ++ + L+A ++
Sbjct: 143 KAKVEEDQRHYRELKAADE 161
Score = 24.6 bits (51), Expect = 2.1
Identities = 13/77 (16%), Positives = 32/77 (41%)
Query: 121 RSLLTTSEQQLREARATIARLTQVNQNSLSEIEKREKRAMERKLSEMEEELKYQQALQAE 180
R+ L S++ R+ R+ + + L + E ++ + ++QA+
Sbjct: 293 RAALEASKEMRRKNALEAIRMAEDRRTRLRRESEIEDALLQIYCEGQQNIASFKQAIHVN 352
Query: 181 NQRLKDENGALIRVISK 197
RL+D + L+ + +
Sbjct: 353 KHRLRDNSHQLVDALER 369
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 28.3 bits (60), Expect = 0.17
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 146 QNSLSEIEKREKRAMERKLSEMEEELKYQQA---LQAENQRLKDENGALIRV 194
+NS+ E+++R E+K E+ KYQQ ++ + Q+ K+ L+ V
Sbjct: 639 ENSIKELQERCAELREQKRDLQEQLSKYQQTKMKVKRQEQKCKELTARLVNV 690
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 28.3 bits (60), Expect = 0.17
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 113 SASEVRRLRSLLTTSEQQLREARATIARLTQVNQNSLSEIE--KREKRAMERKLSEMEEE 170
++ V+R + E L + AR Q + +IE K+EK A + + +MEEE
Sbjct: 841 TSKNVQRWERAVQDDEDSLETFKQAEARQRQEIEKDKEKIELMKQEKAAHKTLVDQMEEE 900
Query: 171 L-KYQQALQAENQRLKDENGALIRVISKL 198
+ K ++ +QA + L + ++ + S++
Sbjct: 901 MAKARREVQALAKELAAIHQSIANIESRI 929
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 26.2 bits (55), Expect = 0.68
Identities = 12/44 (27%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 138 IARLTQVNQNSLSEIEKREKRAMERKLSEMEEELKYQQALQAEN 181
+A L +++ NSL ++E+R A E++L + + + ++A+N
Sbjct: 1539 LANLREIDVNSLDDLERR-LSAAEKELEDAQLTKRLSSLVEAKN 1581
>AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein
protein.
Length = 455
Score = 26.2 bits (55), Expect = 0.68
Identities = 13/67 (19%), Positives = 35/67 (52%)
Query: 105 DYKALYEASASEVRRLRSLLTTSEQQLREARATIARLTQVNQNSLSEIEKREKRAMERKL 164
D+ + E + R + S ++S+Q+ ++ R+ + Q Q + E+++++ +RK+
Sbjct: 160 DHSSFVEVVRRKPRGINSGKSSSQQREQQQRSLQQQQQQQQQQQQQQQEQQQQQQQQRKI 219
Query: 165 SEMEEEL 171
+ +L
Sbjct: 220 RRPKADL 226
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 25.0 bits (52), Expect = 1.6
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 129 QQLREARATIARLTQVNQNSLSEIE--KREKRAMERKLSEMEEELKYQQAL 177
Q R+ARA + Q N ++S E +R +R MER + + + QA+
Sbjct: 1163 QAQRQARAHMLPDRQQNGRAVSSAEELERRRREMERTRRQRQRRARDSQAI 1213
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.307 0.122 0.308
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,763
Number of Sequences: 2123
Number of extensions: 3208
Number of successful extensions: 30
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 17
length of query: 200
length of database: 516,269
effective HSP length: 61
effective length of query: 139
effective length of database: 386,766
effective search space: 53760474
effective search space used: 53760474
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 46 (22.6 bits)
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