GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002008-TA|BGIBMGA002008-PA|IPR002110|Ankyrin
         (589 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    26   0.84 
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    26   0.84 
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    26   0.84 
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   5.9  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   7.8  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    23   7.8  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   7.8  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   7.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   7.8  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 25.8 bits (54), Expect = 0.84
 Identities = 15/48 (31%), Positives = 23/48 (47%)

Query: 310 SIPPLPQSTLAAIELQKKALEPNNSENANTNEDVQTRISPAERRDKEN 357
           S+ P P+ T  A  +  K     NS N+   +   ++ISP E +D  N
Sbjct: 172 SLHPSPRITKKANSVSVKVENRRNSPNSCEKKIGLSKISPKESQDAAN 219


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 25.8 bits (54), Expect = 0.84
 Identities = 15/48 (31%), Positives = 23/48 (47%)

Query: 310 SIPPLPQSTLAAIELQKKALEPNNSENANTNEDVQTRISPAERRDKEN 357
           S+ P P+ T  A  +  K     NS N+   +   ++ISP E +D  N
Sbjct: 120 SLHPSPRITKKANSVSVKVENRRNSPNSCEKKIGLSKISPKESQDAAN 167


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 25.8 bits (54), Expect = 0.84
 Identities = 15/48 (31%), Positives = 23/48 (47%)

Query: 310 SIPPLPQSTLAAIELQKKALEPNNSENANTNEDVQTRISPAERRDKEN 357
           S+ P P+ T  A  +  K     NS N+   +   ++ISP E +D  N
Sbjct: 303 SLHPSPRITKKANSVSVKVENRRNSPNSCEKKIGLSKISPKESQDAAN 350


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 11/20 (55%), Positives = 14/20 (70%)

Query: 198 SISSWLEEAALKAPRRVNNN 217
           SISS L E AL+AP+   N+
Sbjct: 24  SISSILPETALEAPKSPENH 43


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 73  AMADLLQKVIDEKGVDCEKSRNAEVDTLMSDARE 106
           AM DLL    +++G+  ++    EVDT M +  +
Sbjct: 282 AMLDLLLTAKNKEGLIDDEGIREEVDTFMFEGHD 315


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 9/15 (60%), Positives = 12/15 (80%)

Query: 106 EWALHGYVEVRDLKT 120
           E A++ YVE+RDL T
Sbjct: 124 ELAMYNYVEMRDLVT 138


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 9/15 (60%), Positives = 12/15 (80%)

Query: 106 EWALHGYVEVRDLKT 120
           E A++ YVE+RDL T
Sbjct: 357 ELAMYNYVEMRDLVT 371


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 9/15 (60%), Positives = 12/15 (80%)

Query: 106 EWALHGYVEVRDLKT 120
           E A++ YVE+RDL T
Sbjct: 357 ELAMYNYVEMRDLVT 371


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 73  AMADLLQKVIDEKGVDCEKSRNAEVDTLMSDARE 106
           AM DLL    +++G+  ++    EVDT M +  +
Sbjct: 282 AMLDLLLTAKNKEGLIDDEGIREEVDTFMFEGHD 315


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.311    0.127    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,695
Number of Sequences: 317
Number of extensions: 4263
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 9
length of query: 589
length of database: 114,650
effective HSP length: 61
effective length of query: 528
effective length of database: 95,313
effective search space: 50325264
effective search space used: 50325264
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 46 (22.6 bits)