GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002008-TA|BGIBMGA002008-PA|IPR002110|Ankyrin
         (589 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      24   4.0  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   5.3  
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    23   7.1  

>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 390 DEESETQRKAHAKRVRETRRSTQGVTLDEIKSAEQLVKKKSSNGT 434
           + ESET+  A + + +  R+S  G T +EI++   +   +    T
Sbjct: 224 ENESETESNASSTKTKMRRKS--GATFEEIQNQRVMANVRERQRT 266


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 19/95 (20%), Positives = 42/95 (44%), Gaps = 2/95 (2%)

Query: 265 APSP-ESTEMAEQQAQNDEAPSWRRSASFRNRQQDSATRIKASSCPSIPPLPQSTLAAIE 323
           A SP ++ +  E ++ +  A   R S  F +   D+    +     S+ P  ++  A + 
Sbjct: 689 ANSPTKNADSREYRSNSMGAVMTRNSEMFSSLLSDTEQHFRQHR-DSLSPRVENRSAIVH 747

Query: 324 LQKKALEPNNSENANTNEDVQTRISPAERRDKENN 358
            +  A   +++ +  + E+  T    AE+R+K  +
Sbjct: 748 SEASANANSSTSSEESREEKATTSLEAEKREKSEH 782


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 271 TEMAEQQAQNDEAPSWRRSASFRNRQQDSATRIKASSCPSIPPLPQSTLAAIE 323
           T +  Q + +  AP  ++  S      ++  +++ S  P+ PP+P     A+E
Sbjct: 67  TPVVSQGSDSYTAPDGQQ-VSITYVADENGFQVQGSHIPTAPPIPPEIQRALE 118


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.311    0.127    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,181
Number of Sequences: 429
Number of extensions: 5950
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 4
length of query: 589
length of database: 140,377
effective HSP length: 61
effective length of query: 528
effective length of database: 114,208
effective search space: 60301824
effective search space used: 60301824
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 46 (22.6 bits)