GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002007-TA|BGIBMGA002007-PA|IPR002110|Ankyrin
         (96 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    22   0.98 
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           20   3.9  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    19   6.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    19   6.9  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    19   6.9  

>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 0.98
 Identities = 8/25 (32%), Positives = 14/25 (56%)

Query: 12  KRAEQLKRWEESETNKQSPTPKRAS 36
           KRA+  K   + + N   P+P+R +
Sbjct: 96  KRAQHEKGMHDQQNNNPLPSPRRVA 120


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 20.2 bits (40), Expect = 3.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)

Query: 29  SPTPKRASRIQFSA 42
           SPTP  +S   FSA
Sbjct: 202 SPTPSHSSESSFSA 215


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 9/17 (52%), Positives = 9/17 (52%)

Query: 15  EQLKRWEESETNKQSPT 31
           EQLK  E   T K  PT
Sbjct: 242 EQLKELENPPTPKPRPT 258


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 9/36 (25%), Positives = 20/36 (55%)

Query: 10   LFKRAEQLKRWEESETNKQSPTPKRASRIQFSAGIV 45
            L+ ++ +L++ E    N ++P P +A     +AG +
Sbjct: 1642 LYGQSFRLEKPENHGLNAKAPGPGQAGEYTRAAGFL 1677


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query: 4   NRSSSALFKRAEQLKRWEE 22
           NR    + +  E LKRW +
Sbjct: 295 NREVDQIKQDVEDLKRWSD 313


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.313    0.124    0.345 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,558
Number of Sequences: 317
Number of extensions: 594
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 96
length of database: 114,650
effective HSP length: 48
effective length of query: 48
effective length of database: 99,434
effective search space:  4772832
effective search space used:  4772832
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.7 bits)
S2: 37 (19.0 bits)