GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002006-TA|BGIBMGA002006-PA|undefined
         (110 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2FPK0 Cluster: Putative uncharacterized protein; n=1; ...    35   0.37 
UniRef50_Q464X3 Cluster: Putative uncharacterized protein; n=1; ...    32   2.0  
UniRef50_Q926V0 Cluster: Lin2940 protein; n=1; Listeria innocua|...    32   2.6  
UniRef50_Q6MUX9 Cluster: Related to GTPase-activating protein of...    32   2.6  
UniRef50_A0GS91 Cluster: Putative uncharacterized protein; n=1; ...    31   4.6  
UniRef50_O76643 Cluster: Putative uncharacterized protein; n=1; ...    31   4.6  
UniRef50_Q8TPR8 Cluster: Cell surface protein; n=6; cellular org...    31   4.6  
UniRef50_Q24FB1 Cluster: MYND finger family protein; n=4; Oligoh...    31   6.1  
UniRef50_A2F9Q9 Cluster: Putative uncharacterized protein; n=1; ...    30   8.0  
UniRef50_Q8TSB5 Cluster: Extracellular solute-binding protein, f...    30   8.0  

>UniRef50_A2FPK0 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 956

 Score = 34.7 bits (76), Expect = 0.37
 Identities = 14/35 (40%), Positives = 22/35 (62%)

Query: 33  FHSATEVKPYIIYEFKKDENTLYAHTGFLGEADVI 67
           F  A  VK + +Y   + EN+L+AHT F G +D++
Sbjct: 224 FIFADSVKKFSVYNMYESENSLFAHTTFNGRSDLV 258


>UniRef50_Q464X3 Cluster: Putative uncharacterized protein; n=1;
           Methanosarcina barkeri str. Fusaro|Rep: Putative
           uncharacterized protein - Methanosarcina barkeri (strain
           Fusaro / DSM 804)
          Length = 771

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 14  DDEEAATIEQPDLAAKKP-TFHSATEVKPYIIYEFKKDENTLYAHTGFLGEADVICIRRI 72
           DDE+   I   D+  K+  T   A+++    IY  K   +  Y+  GF+   D+I  + I
Sbjct: 174 DDEDGRNIAVYDVNTKETITVSHASQIFSPHIYGNKVIWSNFYSRDGFIEMYDLITKKTI 233

Query: 73  DATCDN 78
           D T DN
Sbjct: 234 DVTSDN 239


>UniRef50_Q926V0 Cluster: Lin2940 protein; n=1; Listeria
           innocua|Rep: Lin2940 protein - Listeria innocua
          Length = 320

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 29  KKPTFHSATEVKPYIIYEFKKDENTLYAHTGFLGEADVICIRRIDATCDNEYSLWFLEYT 88
           KKPT     E K Y     + + +++Y++    GE D+I ++ I    +++  +W+L   
Sbjct: 237 KKPT-DRIIEEKSYFFKNLEGEIDSIYSYGFSFGEVDLIYLKEIFKHLNSKNMIWYLHSY 295

Query: 89  IKKDIMQFQCK 99
            ++   +F+ K
Sbjct: 296 DRQQHNEFKLK 306


>UniRef50_Q6MUX9 Cluster: Related to GTPase-activating protein of
           the rho/rac family; n=6; Pezizomycotina|Rep: Related to
           GTPase-activating protein of the rho/rac family -
           Neurospora crassa
          Length = 1189

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 80  YSLWFLEYTIKKDIMQFQCKHLIACLVPK 108
           Y LW     I  +  + QC HLI CL+PK
Sbjct: 926 YRLWLAAAKISDEDKKRQCLHLICCLMPK 954


>UniRef50_A0GS91 Cluster: Putative uncharacterized protein; n=1;
           Burkholderia phytofirmans PsJN|Rep: Putative
           uncharacterized protein - Burkholderia phytofirmans PsJN
          Length = 601

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)

Query: 6   EVVAMLDSDDEEAATIEQPDLAAKKPTFHSATEVKPYII 44
           E++AMLDS +E  ATI  PD   +   F    EV+P+++
Sbjct: 555 EMMAMLDSFEEVFATI--PDEQERAAAFQDLEEVRPFLL 591


>UniRef50_O76643 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 534

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 4/78 (5%)

Query: 20  TIEQPDLAAKKPTFHSATEVKPYIIYEFKKDENTLYAHTGFLGEADVICIRRIDATCDNE 79
           +I   D+   K  F  +T  + +    +K D + +     FLG    +  RR+D    ++
Sbjct: 445 SITLEDVLYLKEKFLLSTNFRQFKAKLYKTDVDDIIFEENFLG----VPFRRVDGISSDQ 500

Query: 80  YSLWFLEYTIKKDIMQFQ 97
             +WF  YT   + +Q +
Sbjct: 501 PEIWFFPYTYSMEDLQIR 518


>UniRef50_Q8TPR8 Cluster: Cell surface protein; n=6; cellular
           organisms|Rep: Cell surface protein - Methanosarcina
           acetivorans
          Length = 919

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 3/67 (4%)

Query: 14  DDEEAATIEQPDLAAKKP--TFHSATEVKPYIIYEFKKDENTLYAHTGFLGEADVICIRR 71
           DD++   I   D+  K+     HS+    P++ Y  K   +  Y  +GF+   D++  + 
Sbjct: 174 DDDDGRNIAVYDVNTKETINVHHSSQVFNPHM-YGNKVIWSNFYTRSGFIQMYDLVAKKA 232

Query: 72  IDATCDN 78
           ID T DN
Sbjct: 233 IDVTSDN 239


>UniRef50_Q24FB1 Cluster: MYND finger family protein; n=4;
           Oligohymenophorea|Rep: MYND finger family protein -
           Tetrahymena thermophila SB210
          Length = 1283

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 10/25 (40%), Positives = 17/25 (68%)

Query: 34  HSATEVKPYIIYEFKKDENTLYAHT 58
           H+A     Y++ +FK+D+NT Y H+
Sbjct: 575 HAADRAAQYLLDQFKRDDNTFYDHS 599


>UniRef50_A2F9Q9 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1936

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 3/64 (4%)

Query: 41  PYIIYEF---KKDENTLYAHTGFLGEADVICIRRIDATCDNEYSLWFLEYTIKKDIMQFQ 97
           PY+  EF    KD +    + G   E  ++ ++ +     N+YS  F E+    D   FQ
Sbjct: 791 PYVKEEFFNLMKDVSKHLVYEGETKECSLLFVKSVTLKVLNKYSRKFFEFKKSNDFFLFQ 850

Query: 98  CKHL 101
            K+L
Sbjct: 851 IKNL 854


>UniRef50_Q8TSB5 Cluster: Extracellular solute-binding protein,
           family 5; n=1; Methanosarcina acetivorans|Rep:
           Extracellular solute-binding protein, family 5 -
           Methanosarcina acetivorans
          Length = 524

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 18/54 (33%), Positives = 26/54 (48%)

Query: 14  DDEEAATIEQPDLAAKKPTFHSATEVKPYIIYEFKKDENTLYAHTGFLGEADVI 67
           D+  AA +  P+    K  F  A     YI+ E+ K+E TL A+  + G A  I
Sbjct: 161 DEVAAAWVVCPNCYDSKGEFKEAIGTGAYILEEYSKEEITLRANPDYWGGAPKI 214


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.321    0.136    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,502,344
Number of Sequences: 1657284
Number of extensions: 4472354
Number of successful extensions: 9048
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 9044
Number of HSP's gapped (non-prelim): 10
length of query: 110
length of database: 575,637,011
effective HSP length: 86
effective length of query: 24
effective length of database: 433,110,587
effective search space: 10394654088
effective search space used: 10394654088
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)