GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002006-TA|BGIBMGA002006-PA|undefined
         (110 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC131787-1|AAI31788.1| 1256|Homo sapiens N-acetylglucosamine-1-p...    28   5.4  
BC071687-1|AAH71687.1|  490|Homo sapiens GNPTAB protein protein.       28   5.4  
AY687932-1|AAV98624.1| 1256|Homo sapiens GlcNAc-phosphotransfera...    28   5.4  
AM085438-1|CAJ30014.1| 1256|Homo sapiens alpha-beta GlcNAc-1-pho...    28   5.4  
AK056137-1|BAB71102.1|  847|Homo sapiens protein ( Homo sapiens ...    28   5.4  
AJ225699-1|CAA12576.1|   75|Homo sapiens Ig heavy chain variable...    28   7.1  

>BC131787-1|AAI31788.1| 1256|Homo sapiens
           N-acetylglucosamine-1-phosphate transferase, alpha and
           beta subunits protein.
          Length = 1256

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 1   MLTYSEVVAMLDSDDEEAATIEQPDLAAKKPTFHSATEV 39
           +LT+   V ML  D    A I   DL +  P+FHSA+++
Sbjct: 129 LLTHCIKVPMLVLDPALPANITLKDLPSLYPSFHSASDI 167


>BC071687-1|AAH71687.1|  490|Homo sapiens GNPTAB protein protein.
          Length = 490

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 1   MLTYSEVVAMLDSDDEEAATIEQPDLAAKKPTFHSATEV 39
           +LT+   V ML  D    A I   DL +  P+FHSA+++
Sbjct: 129 LLTHCIKVPMLVLDPALPANITLKDLPSLYPSFHSASDI 167


>AY687932-1|AAV98624.1| 1256|Homo sapiens GlcNAc-phosphotransferase
           precursor protein.
          Length = 1256

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 1   MLTYSEVVAMLDSDDEEAATIEQPDLAAKKPTFHSATEV 39
           +LT+   V ML  D    A I   DL +  P+FHSA+++
Sbjct: 129 LLTHCIKVPMLVLDPALPANITLKDLPSLYPSFHSASDI 167


>AM085438-1|CAJ30014.1| 1256|Homo sapiens alpha-beta
           GlcNAc-1-phosphotransferase protein.
          Length = 1256

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 1   MLTYSEVVAMLDSDDEEAATIEQPDLAAKKPTFHSATEV 39
           +LT+   V ML  D    A I   DL +  P+FHSA+++
Sbjct: 129 LLTHCIKVPMLVLDPALPANITLKDLPSLYPSFHSASDI 167


>AK056137-1|BAB71102.1|  847|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31575 fis, clone NT2RI2001846, moderately
           similar to Basic domain/leucine zipper transcription
           factor. ).
          Length = 847

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 1   MLTYSEVVAMLDSDDEEAATIEQPDLAAKKPTFHSATEV 39
           +LT+   V ML  D    A I   DL +  P+FHSA+++
Sbjct: 129 LLTHCIKVPMLVLDPALPANITLKDLPSLYPSFHSASDI 167


>AJ225699-1|CAA12576.1|   75|Homo sapiens Ig heavy chain variable
          region protein.
          Length = 75

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 4/57 (7%)

Query: 34 HSATEVKPYIIYEFKKDENTLYAHTGFLGEADV---ICIRRIDATCDNEYSLWFLEY 87
          H    VK   I      +NTLY H   L   D     C++  DA C N     FL+Y
Sbjct: 19 HYVDSVKDRFIMSRDNSKNTLYLHMSSLRTEDTAVYYCVKD-DAACINGECYDFLDY 74


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.321    0.136    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,269,194
Number of Sequences: 224733
Number of extensions: 604896
Number of successful extensions: 988
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 983
Number of HSP's gapped (non-prelim): 6
length of query: 110
length of database: 73,234,838
effective HSP length: 79
effective length of query: 31
effective length of database: 55,480,931
effective search space: 1719908861
effective search space used: 1719908861
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 58 (27.5 bits)