GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002005-TA|BGIBMGA002005-PA|IPR001993|Mitochondrial
substrate carrier
         (309 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...   466   e-133
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...   466   e-133
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   4.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   4.5  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           22   5.9  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           22   5.9  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  466 bits (1149), Expect = e-133
 Identities = 224/291 (76%), Positives = 242/291 (83%), Gaps = 1/291 (0%)

Query: 20  FLKDFLAGGISAAISKTAVAPIERVKLILQVQHVSKQISEDKRYKGMVDAFVRIPKEQGF 79
           F KDFLAGG++AAISKT VAPIERVKL+LQVQH+SKQISE++RYKGM+D FVRIPKEQGF
Sbjct: 10  FAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGF 69

Query: 80  LSFWRGNLANVIRYFPTQALNFAFKDVYKGIFLEGVDKNKQFWRHFXXXXXXXXXXXXTS 139
           LS+WRGNLANVIRYFPTQALNFAFKD YK +FL GVDKN QF R+F            TS
Sbjct: 70  LSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATS 129

Query: 140 LCFVYPLDFARTRLAADVGK-GKDKEFTGLVNCLIKTLKSDGPMGLYRGFVVSVQGIIIY 198
           LCFVYPLDFARTRLAADVGK G ++EFTGL NCL K  K+DG  GLYRGF VSVQGIIIY
Sbjct: 130 LCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIY 189

Query: 199 RATYFGCFDTARDMLPDPKNTSLLITWMIAQTVTTVAGIASYPLDTVRRRMMMQSGRPLN 258
           RA YFG +DTAR MLPDPK T  LI+W IAQ VTTVAGI SYP DTVRRRMMMQSGR  +
Sbjct: 190 RAAYFGFYDTARGMLPDPKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKS 249

Query: 259 ERQYKSTAHCWATILKTEGAGAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 309
           E  YKST HCWATI KTEG  AFFKGAFSN+LRGTGGA VLVLYDEIK +L
Sbjct: 250 EILYKSTLHCWATIYKTEGGNAFFKGAFSNILRGTGGALVLVLYDEIKNLL 300


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  466 bits (1149), Expect = e-133
 Identities = 224/291 (76%), Positives = 242/291 (83%), Gaps = 1/291 (0%)

Query: 20  FLKDFLAGGISAAISKTAVAPIERVKLILQVQHVSKQISEDKRYKGMVDAFVRIPKEQGF 79
           F KDFLAGG++AAISKT VAPIERVKL+LQVQH+SKQISE++RYKGM+D FVRIPKEQGF
Sbjct: 10  FAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGF 69

Query: 80  LSFWRGNLANVIRYFPTQALNFAFKDVYKGIFLEGVDKNKQFWRHFXXXXXXXXXXXXTS 139
           LS+WRGNLANVIRYFPTQALNFAFKD YK +FL GVDKN QF R+F            TS
Sbjct: 70  LSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATS 129

Query: 140 LCFVYPLDFARTRLAADVGK-GKDKEFTGLVNCLIKTLKSDGPMGLYRGFVVSVQGIIIY 198
           LCFVYPLDFARTRLAADVGK G ++EFTGL NCL K  K+DG  GLYRGF VSVQGIIIY
Sbjct: 130 LCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIY 189

Query: 199 RATYFGCFDTARDMLPDPKNTSLLITWMIAQTVTTVAGIASYPLDTVRRRMMMQSGRPLN 258
           RA YFG +DTAR MLPDPK T  LI+W IAQ VTTVAGI SYP DTVRRRMMMQSGR  +
Sbjct: 190 RAAYFGFYDTARGMLPDPKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKS 249

Query: 259 ERQYKSTAHCWATILKTEGAGAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 309
           E  YKST HCWATI KTEG  AFFKGAFSN+LRGTGGA VLVLYDEIK +L
Sbjct: 250 EILYKSTLHCWATIYKTEGGNAFFKGAFSNILRGTGGALVLVLYDEIKNLL 300


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 8/19 (42%), Positives = 14/19 (73%)

Query: 161 KDKEFTGLVNCLIKTLKSD 179
           K +E TGL+  +I+ +K+D
Sbjct: 351 KQQEITGLIQNIIQEMKND 369


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 8/19 (42%), Positives = 14/19 (73%)

Query: 161 KDKEFTGLVNCLIKTLKSD 179
           K +E TGL+  +I+ +K+D
Sbjct: 389 KQQEITGLIQNIIQEMKND 407


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 10/22 (45%), Positives = 12/22 (54%)

Query: 257 LNERQYKSTAHCWATILKTEGA 278
           L ERQ K   + WA + K E A
Sbjct: 24  LTERQKKLVQNTWAVVRKDEVA 45


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 10/22 (45%), Positives = 12/22 (54%)

Query: 257 LNERQYKSTAHCWATILKTEGA 278
           L ERQ K   + WA + K E A
Sbjct: 24  LTERQKKLVQNTWAVVRKDEVA 45


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.325    0.140    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,091
Number of Sequences: 429
Number of extensions: 3048
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 6
length of query: 309
length of database: 140,377
effective HSP length: 58
effective length of query: 251
effective length of database: 115,495
effective search space: 28989245
effective search space used: 28989245
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 44 (21.8 bits)