Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002004-TA|BGIBMGA002004-PA|IPR003439|ABC transporter
related, IPR003593|AAA ATPase
(622 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette... 40 2e-04
U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette... 40 2e-04
U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette... 40 2e-04
L07880-1|AAA29358.1| 218|Anopheles gambiae glutathione S-transf... 29 0.37
AY545988-1|AAS99341.1| 423|Anopheles gambiae carboxypeptidase B... 28 0.85
AJ627286-1|CAF28572.1| 423|Anopheles gambiae carboxypeptidase B... 28 0.85
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 27 2.0
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 26 2.6
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 25 4.5
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 25 6.0
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 25 7.9
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 25 7.9
>U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 39.9 bits (89), Expect = 2e-04
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 227 KDFSGGWRMRIALARALYVKPHLLLLDEPTNHLD 260
K SGG R R+A A PHLLL DEPT+ LD
Sbjct: 242 KGLSGGERKRLAFASETLTDPHLLLCDEPTSGLD 275
Score = 37.1 bits (82), Expect = 0.001
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 514 MRQLSDGQRCRVVFAWLAWQTPHLLLLDEPTNHLD 548
++ LS G+R R+ FA PHLLL DEPT+ LD
Sbjct: 241 IKGLSGGERKRLAFASETLTDPHLLLCDEPTSGLD 275
Score = 25.8 bits (54), Expect = 3.4
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 426 LALVGPNGAGKSTLLKLL 443
LA++G +GAGK+TLL L
Sbjct: 129 LAVMGSSGAGKTTLLNAL 146
>U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 39.9 bits (89), Expect = 2e-04
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 227 KDFSGGWRMRIALARALYVKPHLLLLDEPTNHLD 260
K SGG R R+A A PHLLL DEPT+ LD
Sbjct: 242 KGLSGGERKRLAFASETLTDPHLLLCDEPTSGLD 275
Score = 37.1 bits (82), Expect = 0.001
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 514 MRQLSDGQRCRVVFAWLAWQTPHLLLLDEPTNHLD 548
++ LS G+R R+ FA PHLLL DEPT+ LD
Sbjct: 241 IKGLSGGERKRLAFASETLTDPHLLLCDEPTSGLD 275
Score = 25.8 bits (54), Expect = 3.4
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 426 LALVGPNGAGKSTLLKLL 443
LA++G +GAGK+TLL L
Sbjct: 129 LAVMGSSGAGKTTLLNAL 146
>U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 673
Score = 39.9 bits (89), Expect = 2e-04
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 227 KDFSGGWRMRIALARALYVKPHLLLLDEPTNHLD 260
K SGG R R+A A PHLLL DEPT+ LD
Sbjct: 220 KGLSGGERKRLAFASETLTDPHLLLCDEPTSGLD 253
Score = 37.1 bits (82), Expect = 0.001
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 514 MRQLSDGQRCRVVFAWLAWQTPHLLLLDEPTNHLD 548
++ LS G+R R+ FA PHLLL DEPT+ LD
Sbjct: 219 IKGLSGGERKRLAFASETLTDPHLLLCDEPTSGLD 253
Score = 25.8 bits (54), Expect = 3.4
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 426 LALVGPNGAGKSTLLKLL 443
LA++G +GAGK+TLL L
Sbjct: 107 LAVMGSSGAGKTTLLNAL 124
>L07880-1|AAA29358.1| 218|Anopheles gambiae glutathione
S-transferase protein.
Length = 218
Score = 29.1 bits (62), Expect = 0.37
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 513 PMRQLS----DGQRCRVVFAWLAWQTPHLLLLDEPTNHLDMETIDALADAINDFDGGMVL 568
PMRQ+ DG+R A + + L + N L+ IDA+ D INDF + +
Sbjct: 62 PMRQMPVLEVDGKRVHQSLAMCRYVAKQINLAGD--NPLEALQIDAIVDTINDFRLKIAI 119
Query: 569 VSHD 572
V+++
Sbjct: 120 VAYE 123
>AY545988-1|AAS99341.1| 423|Anopheles gambiae carboxypeptidase B
precursor protein.
Length = 423
Score = 27.9 bits (59), Expect = 0.85
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 161 MEVDE-ERVKLEKLAEMLAHCEDDESQEQLMDVYDRLDDLSADTAEA-----RAANILHG 214
+EVD + K+ + A ++ ED + E+ ++ +D DL A+ + + N+ HG
Sbjct: 50 IEVDFWDAPKVGRSARLMVTREDHKRVEEFLEQHDIEYDLVAEDVQELLNREQRRNVEHG 109
Query: 215 LGFTKEMQQKATKDFSGGWRM 235
++ +AT +F W +
Sbjct: 110 RRLRRDSNSRATVNFEHFWTL 130
>AJ627286-1|CAF28572.1| 423|Anopheles gambiae carboxypeptidase B
protein.
Length = 423
Score = 27.9 bits (59), Expect = 0.85
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 161 MEVDE-ERVKLEKLAEMLAHCEDDESQEQLMDVYDRLDDLSADTAEA-----RAANILHG 214
+EVD + K+ + A ++ ED + E+ ++ +D DL A+ + + N+ HG
Sbjct: 50 IEVDFWDAPKVGRSARLMVTREDHKRVEEFLEQHDIEYDLVAEDVQELLNREQRRNVEHG 109
Query: 215 LGFTKEMQQKATKDFSGGWRM 235
++ +AT +F W +
Sbjct: 110 RRLRRDSNSRATVNFEHFWTL 130
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 26.6 bits (56), Expect = 2.0
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 344 RFGHGSAKLARQAQSKEKTLAKMVAQGLTEKVVDDK-ILNFYFPSCGK 390
RF H + + SKE LA + +G EK V+ + +++ +C K
Sbjct: 286 RFQHAGTRFKTKQFSKENFLATLHGEGFREKAVNHQGMISAMISACEK 333
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 26.2 bits (55), Expect = 2.6
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 114 LVGLNGCGKSSLLAAL 129
LVG NG GKS++LAA+
Sbjct: 112 LVGKNGSGKSAILAAM 127
Score = 25.0 bits (52), Expect = 6.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 428 LVGPNGAGKSTLLKLLYGDLVPSTGMIRKNSHLR 461
LVG NG+GKS +L + L + G + S L+
Sbjct: 112 LVGKNGSGKSAILAAMTIGLGCNAGQTNRCSSLK 145
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 25.4 bits (53), Expect = 4.5
Identities = 16/67 (23%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 310 YEAFVRTRME---LLENQMKQYNW----EQDQIAHMKNYIARFGHGSAKLARQAQSKEKT 362
Y+A R+E L++ ++KQY+ ++ + + +KN + +F A + + ++KT
Sbjct: 343 YDALKAERVEKEKLVKEEIKQYDELVSAKESKESTLKNSLDKFAKVQANMRATNERRKKT 402
Query: 363 LAKMVAQ 369
L ++ A+
Sbjct: 403 LEQIAAE 409
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 25.0 bits (52), Expect = 6.0
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 427 ALVGPNGAGKSTLLKLLYGDLVPSTGMIR 455
A++GPNG+GKS + + + T +R
Sbjct: 35 AVIGPNGSGKSNFMDAISFVMGEKTSSLR 63
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.6 bits (51), Expect = 7.9
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 154 KTALQCVMEVDEERVKLEKLAEMLAHCEDDESQEQLMDVY 193
KT+ + E E R ++E+L M + E+ + + D+Y
Sbjct: 667 KTSAKLAEEAAERRERMERLEAMTTAQIEQENTQMINDLY 706
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.6 bits (51), Expect = 7.9
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 154 KTALQCVMEVDEERVKLEKLAEMLAHCEDDESQEQLMDVY 193
KT+ + E E R ++E+L M + E+ + + D+Y
Sbjct: 667 KTSAKLAEEAAERRERMERLEAMTTAQIEQENTQMINDLY 706
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.320 0.136 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,340
Number of Sequences: 2123
Number of extensions: 23873
Number of successful extensions: 102
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 86
Number of HSP's gapped (non-prelim): 20
length of query: 622
length of database: 516,269
effective HSP length: 68
effective length of query: 554
effective length of database: 371,905
effective search space: 206035370
effective search space used: 206035370
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)
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