GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002003-TA|BGIBMGA002003-PA|undefined
         (151 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000023D6C2 Cluster: hypothetical protein FG02611.1; ...    40   0.030
UniRef50_Q1GIK3 Cluster: Putative uncharacterized protein; n=1; ...    35   0.86 
UniRef50_O13801 Cluster: RNA-binding protein; n=1; Schizosacchar...    33   2.6  
UniRef50_A7HNY5 Cluster: Penicillin-binding protein transpeptida...    33   3.5  
UniRef50_Q7XQJ7 Cluster: OSJNBa0017B10.11 protein; n=11; Oryza s...    33   3.5  
UniRef50_UPI0000DD8034 Cluster: PREDICTED: hypothetical protein;...    32   6.1  
UniRef50_A2SI96 Cluster: Putative uncharacterized protein; n=1; ...    32   6.1  
UniRef50_Q8E8W1 Cluster: Putative uncharacterized protein; n=1; ...    31   8.0  
UniRef50_Q7PRP6 Cluster: ENSANGP00000001501; n=1; Anopheles gamb...    31   8.0  

>UniRef50_UPI000023D6C2 Cluster: hypothetical protein FG02611.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG02611.1 - Gibberella zeae PH-1
          Length = 903

 Score = 39.5 bits (88), Expect = 0.030
 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 1/74 (1%)

Query: 45  SWSYGMQLHCLITPLQFIAAHD-RIINAWGYTSPAWQLCITWTTHDTHSTFKLSLDSPQT 103
           S+ Y    H  + P   +++ D R IN   +T P   L I+WT+  T ST  LS  +  T
Sbjct: 73  SYMYRTNQHLTVQPPTSVSSCDARTINYITHTLPQSCLTISWTSSTTTSTPSLSNSTSDT 132

Query: 104 SSSTGDNHAAFSSV 117
           SS    ++A  SSV
Sbjct: 133 SSDPAQSNAPSSSV 146


>UniRef50_Q1GIK3 Cluster: Putative uncharacterized protein; n=1;
           Silicibacter sp. TM1040|Rep: Putative uncharacterized
           protein - Silicibacter sp. (strain TM1040)
          Length = 257

 Score = 34.7 bits (76), Expect = 0.86
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 8/80 (10%)

Query: 13  RILADKSTSLTVVPQQASIAASTGPSQPTHRASWSYGMQLHCLITPLQFIAAHDRIINAW 72
           R+ AD +  L V PQ   ++      + +H     YG  + C++  +     H    + W
Sbjct: 100 RLQADINEMLGVAPQSIKLSEIVNQMRQSHEEDGGYGEVVTCIVEEI-----HVDDSDFW 154

Query: 73  GYTSPAWQLCITWTTHDTHS 92
           G   P W++ +  TTH +HS
Sbjct: 155 G---PRWKVYLDDTTHYSHS 171


>UniRef50_O13801 Cluster: RNA-binding protein; n=1;
           Schizosaccharomyces pombe|Rep: RNA-binding protein -
           Schizosaccharomyces pombe (Fission yeast)
          Length = 604

 Score = 33.1 bits (72), Expect = 2.6
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 52  LHCLITPLQFIAAHDRIINAWGYTSPAWQLCI-TW-TTHDTHSTFKLSLDSPQTSSSTGD 109
           ++C      F A   +I++  G T+   QL + +W T H  H     +L +P+   STG 
Sbjct: 229 INCQADARSFYAERSKIVHVAGLTNDVTQLELESWFTNHGVHPVALWTLKTPEPYKSTGT 288

Query: 110 NHAAFSS 116
               F+S
Sbjct: 289 GFVLFAS 295


>UniRef50_A7HNY5 Cluster: Penicillin-binding protein transpeptidase;
           n=1; Fervidobacterium nodosum Rt17-B1|Rep:
           Penicillin-binding protein transpeptidase -
           Fervidobacterium nodosum Rt17-B1
          Length = 586

 Score = 32.7 bits (71), Expect = 3.5
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 31  IAASTGPSQPTHRASWSY-GMQLHCLITPLQFIAAHDRIINAWGYTSP 77
           I     P    +RA W++ G+     +TP+Q +AA + I+N   Y SP
Sbjct: 364 IPGKLNPPDKWYRADWAFIGIGQSIGVTPIQLLAAFNSIVNDGIYVSP 411


>UniRef50_Q7XQJ7 Cluster: OSJNBa0017B10.11 protein; n=11; Oryza sativa
            (japonica cultivar-group)|Rep: OSJNBa0017B10.11 protein -
            Oryza sativa subsp. japonica (Rice)
          Length = 1814

 Score = 32.7 bits (71), Expect = 3.5
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 15   LADKSTSLTVVPQQASIA-ASTGPSQPTHRASW 46
            LAD     T  P+  S+  AS+GPSQP H A W
Sbjct: 1269 LADFVAEWTPAPEPVSVPEASSGPSQPPHTAHW 1301


>UniRef50_UPI0000DD8034 Cluster: PREDICTED: hypothetical protein;
           n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 297

 Score = 31.9 bits (69), Expect = 6.1
 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 5/80 (6%)

Query: 25  VPQQASIAASTGPSQPTHRA--SWSYGMQLHCLITPLQFIAAHDRIINAWGYTSPAWQLC 82
           +PQQA +  + GPS P   A    ++  +L CL  P+  +     +  A G ++P    C
Sbjct: 146 LPQQAHLPVANGPSTPDSPACSQQTFHTRLTCL-QPMD-LPHQTHLPAANGPSTPDLPAC 203

Query: 83  ITWTTHDTHSTFKLSLDSPQ 102
             WT H T  T    +D PQ
Sbjct: 204 SQWTFH-TSLTCLHPMDLPQ 222


>UniRef50_A2SI96 Cluster: Putative uncharacterized protein; n=1;
           Methylibium petroleiphilum PM1|Rep: Putative
           uncharacterized protein - Methylibium petroleiphilum
           (strain PM1)
          Length = 201

 Score = 31.9 bits (69), Expect = 6.1
 Identities = 15/47 (31%), Positives = 20/47 (42%)

Query: 78  AWQLCITWTTHDTHSTFKLSLDSPQTSSSTGDNHAAFSSVSTHCKLR 124
           AW   + W      S F + L +P +S+  GD      S ST C  R
Sbjct: 153 AWPPALAWQQQTWPSAFSVRLCAPASSARVGDGLPTGMSASTRCNRR 199


>UniRef50_Q8E8W1 Cluster: Putative uncharacterized protein; n=1;
           Shewanella oneidensis|Rep: Putative uncharacterized
           protein - Shewanella oneidensis
          Length = 308

 Score = 31.5 bits (68), Expect = 8.0
 Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 1/65 (1%)

Query: 37  PSQPTHRASWSYGMQLHCLITPLQFIAAHDRIINAWGYTSPAWQLCITWTTHDTHSTFKL 96
           P   TH+  + +G        P Q  A  D+II A GYTS  WQ  I      +   +  
Sbjct: 237 PDPSTHKLYFDHGTATLDAWYP-QLQAKADKIIEAKGYTSQNWQSLIFEGAEHSEHAWAA 295

Query: 97  SLDSP 101
            LD P
Sbjct: 296 RLDIP 300


>UniRef50_Q7PRP6 Cluster: ENSANGP00000001501; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000001501 - Anopheles gambiae
           str. PEST
          Length = 1663

 Score = 31.5 bits (68), Expect = 8.0
 Identities = 14/36 (38%), Positives = 22/36 (61%)

Query: 83  ITWTTHDTHSTFKLSLDSPQTSSSTGDNHAAFSSVS 118
           +T    D+++T  L+L +PQ S+S G NH   SS +
Sbjct: 438 VTNRADDSNATTGLALQAPQASASHGSNHGGASSTA 473


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.319    0.125    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,896,540
Number of Sequences: 1657284
Number of extensions: 5459976
Number of successful extensions: 13194
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 13186
Number of HSP's gapped (non-prelim): 12
length of query: 151
length of database: 575,637,011
effective HSP length: 94
effective length of query: 57
effective length of database: 419,852,315
effective search space: 23931581955
effective search space used: 23931581955
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 68 (31.5 bits)