GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002002-TA|BGIBMGA002002-PA|IPR001993|Mitochondrial
substrate carrier, IPR002067|Mitochondrial carrier protein,
IPR002167|Graves disease carrier protein
         (299 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    24   1.6  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    24   1.6  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   6.4  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query: 182 IDLAVYETLKKKYISKYQAHNEQPGILLLLACGSISCTLGQVCS 225
           ID  + E  +KKY+ K   H  +  +LL+     +  TLG + S
Sbjct: 108 IDKDLTELGQKKYLEKRNRHIFRTSVLLIFVMHLMFDTLGGLYS 151


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query: 182 IDLAVYETLKKKYISKYQAHNEQPGILLLLACGSISCTLGQVCS 225
           ID  + E  +KKY+ K   H  +  +LL+     +  TLG + S
Sbjct: 108 IDKDLTELGQKKYLEKRNRHIFRTSVLLIFVMHLMFDTLGGLYS 151


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 33  TCTAPLDRLKVFLQVNTTRENMRKCLAKMLNE 64
           TC A +     FL     R N  K  +++LNE
Sbjct: 216 TCEAVMILRSRFLDARRKRRNFSKQASEILNE 247


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.138    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,625
Number of Sequences: 317
Number of extensions: 2523
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 3
length of query: 299
length of database: 114,650
effective HSP length: 56
effective length of query: 243
effective length of database: 96,898
effective search space: 23546214
effective search space used: 23546214
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)