Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002001-TA|BGIBMGA002001-PA|IPR002048|Calcium-binding
EF-hand
(132 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 33 0.011
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 31 0.045
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 28 0.55
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 27 0.96
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 27 0.96
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 26 2.2
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 2.2
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 26 2.2
SPBC106.20 |exo70|SPBC582.02|exocyst complex subunit Exo70 |Schi... 26 2.2
SPAC19G12.15c |tpp1||trehalose-6-phosphate phosphatase Tpp1|Schi... 25 5.1
SPAC15A10.08 |ain1||alpha-actinin|Schizosaccharomyces pombe|chr ... 24 9.0
SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces ... 24 9.0
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 24 9.0
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 33.5 bits (73), Expect = 0.011
Identities = 24/113 (21%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
Query: 25 FSKLDHDGNGKIDIHDLSVALKELAPHINRSYAEKFLAKSGWKVAGDVTLSEFIHYV--- 81
F D D + ID H+L A++ L + +S K L G + + +F+ +
Sbjct: 43 FKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQMEDFVRVMTEK 102
Query: 82 ---REHEKNLRLQFKHLDRNQDGKVDLEELISAFADLGIAIGRNEAMNLLKRY 131
R+ + ++ F+ D ++ GK+ L L +L I E +++ +
Sbjct: 103 IVERDPLEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEF 155
Score = 28.7 bits (61), Expect = 0.32
Identities = 16/54 (29%), Positives = 24/54 (44%)
Query: 25 FSKLDHDGNGKIDIHDLSVALKELAPHINRSYAEKFLAKSGWKVAGDVTLSEFI 78
F D D GKI + +L KEL +I+ E + + G++ EFI
Sbjct: 116 FELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEFDLDQDGEINEQEFI 169
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 31.5 bits (68), Expect = 0.045
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 25 FSKLDHDGNGKIDIHDLSVALKELAPHINRSYAEKFLAKSGWKVAGDVTLSEFIHYV--- 81
F+ LD DG+G I D+ L L N+ +E + + + L+ F+ +
Sbjct: 54 FALLDKDGDGNIGREDVKTMLTSL----NQDASEDSINHMFESINPPINLAAFLTAMGSM 109
Query: 82 --REHEKNLRLQ-FKHLDRNQDGKVDLEELISAFADLGIAIGRNEAMNLLKRY 131
R +N L+ F D Q GK+ + + A + +G + E ++L+ Y
Sbjct: 110 LCRISPRNDLLEAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEVESILRSY 162
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 27.9 bits (59), Expect = 0.55
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 25 FSKLDHDGNGKIDIHDLSVALKELAPHINRSYAEKFLAK 63
FS +D DG G +D + +L + H N+ KF K
Sbjct: 62 FSVVDEDGGGDVDFQEFINSLSVFSVHGNKEEKLKFAFK 100
Score = 25.8 bits (54), Expect = 2.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 80 YVREHEKNLRLQFKHLDRNQDGKVDLEELIS 110
+ E + +R +F +D NQ G +D E +S
Sbjct: 18 FSNEEIERIRKRFIKIDANQSGSIDRNEFLS 48
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 27.1 bits (57), Expect = 0.96
Identities = 13/53 (24%), Positives = 23/53 (43%)
Query: 25 FSKLDHDGNGKIDIHDLSVALKELAPHINRSYAEKFLAKSGWKVAGDVTLSEF 77
F D DGNG I + +L+ L L +++ + ++ G + EF
Sbjct: 91 FKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEF 143
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 27.1 bits (57), Expect = 0.96
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 82 REHEKNLRLQFKHLDRNQDGKVDLEELISAFADLGIAIGRNEAMNLLKRY 131
+E+EKNLR K R D + D + I+ A + R E N++K Y
Sbjct: 469 KENEKNLRFAVKAYRRKADDETD-GQYIAKLASEWLVQCRMEHPNVVKSY 517
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 25.8 bits (54), Expect = 2.2
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 85 EKNLRLQFKHLDRNQDGKVDLEE 107
EK + F +D+N+DG++ LEE
Sbjct: 146 EKRVNKIFNMMDKNKDGQLTLEE 168
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 2.2
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 67 KVAGDVTLSEFIHYVREHEKNLRLQF 92
++A LSEF+ VR+ + ++RLQ+
Sbjct: 184 RIASADALSEFLKIVRQRDSSIRLQW 209
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 25.8 bits (54), Expect = 2.2
Identities = 12/57 (21%), Positives = 30/57 (52%)
Query: 25 FSKLDHDGNGKIDIHDLSVALKELAPHINRSYAEKFLAKSGWKVAGDVTLSEFIHYV 81
+ KL+ + + ++D+ D+ + L + + + E+ K+ +G ++ EF H+V
Sbjct: 303 WEKLEKEQSAQLDLGDVHRMCQMLHLNASMEFLEETFQKADADHSGKLSFEEFQHFV 359
>SPBC106.20 |exo70|SPBC582.02|exocyst complex subunit Exo70
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 615
Score = 25.8 bits (54), Expect = 2.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 39 HDLSVALKELAPHINRSYAEKFLAKSGWK 67
H + L ELA H N SY + + GW+
Sbjct: 382 HGIMSFLNELAEHENASYLLESIGNWGWR 410
>SPAC19G12.15c |tpp1||trehalose-6-phosphate phosphatase
Tpp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 24.6 bits (51), Expect = 5.1
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 77 FIHYVREHEKNLRLQFKHLDRNQDGKVDLEELISAFADL 115
FI+ +RE NL L++ R++ G V L E + A L
Sbjct: 440 FINSIREGVSNLALEYVVCQRDRYGMVLLSEFTATSAML 478
>SPAC15A10.08 |ain1||alpha-actinin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 621
Score = 23.8 bits (49), Expect = 9.0
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 92 FKHLDRNQDGKVDLEELISAFADLGIAIGRNEAMNLLKR 130
F+H ++ + ++ E +A A LG+ E L R
Sbjct: 493 FRHFEKKKSNMLNEVEFYAALASLGLVYDTEEGTALFHR 531
>SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1150
Score = 23.8 bits (49), Expect = 9.0
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 73 TLSEFIHYVREHEKNLRLQFKHLDRNQDGKVDLEELISAFADLG 116
TLS+ I + ++N+ K+L D + DL++ S+F LG
Sbjct: 251 TLSKIISAIDGKKENIS---KYLGEGSDAQPDLKDFNSSFLILG 291
>SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1150
Score = 23.8 bits (49), Expect = 9.0
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 25 FSKLDHDGNGKIDIHDLSVALKE--LAPHINRSYAEKFLA 62
FS +D + K+DIH+L+ + L N E FLA
Sbjct: 984 FSHIDDEVGSKMDIHNLATVITPNILYSKSNDPVDESFLA 1023
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.321 0.138 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 506,510
Number of Sequences: 5004
Number of extensions: 19056
Number of successful extensions: 64
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 52
Number of HSP's gapped (non-prelim): 16
length of query: 132
length of database: 2,362,478
effective HSP length: 66
effective length of query: 66
effective length of database: 2,032,214
effective search space: 134126124
effective search space used: 134126124
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)
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