Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002000-TA|BGIBMGA002000-PA|IPR001628|Nuclear hormone
receptor, DNA-binding, IPR001723|Steroid hormone receptor,
IPR000324|Vitamin D receptor, IPR008946|Nuclear receptor,
ligand-binding, IPR000536|Nuclear hormone receptor, ligand-binding
(384 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 106 4e-25
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 106 4e-25
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 90 3e-20
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 81 2e-17
AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor prot... 60 4e-11
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 46 5e-07
AB264334-1|BAF44089.1| 30|Apis mellifera ecdysone-induced prot... 38 1e-04
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 27 0.27
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 25 1.4
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 23 3.3
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 23 3.3
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 22 7.7
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 22 7.7
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 106 bits (254), Expect = 4e-25
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 14 CAVCRDHSSGKHYGVFACDGCAGFFKRSVRRDRRYTCKARNPGGCVVDKAHRNQCRACRL 73
C++C D +SGKHYGV++C+GC GFFKR+VR+D Y C R C++DK RN+C+ CR
Sbjct: 110 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYAC--REEKSCIIDKRQRNRCQYCRY 167
Query: 74 AKCLDAGMNKDAVQHER 90
KCL GM ++AVQ ER
Sbjct: 168 QKCLAMGMKREAVQEER 184
Score = 58.4 bits (135), Expect = 1e-10
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 27/210 (12%)
Query: 183 MCEAAARLLFMNVKWAKNVPAFAXXXXXXXXXXXXXXWKDLFIIG-SAQFLYPLDLKILS 241
+C A + LF V WAK++P F W +L I S + + D +L+
Sbjct: 234 ICNATNKQLFQLVAWAKHIPHFTSLPLEDQVLLLRAGWNELLIASFSHRSIDVKDGIVLA 293
Query: 242 EG-----NARIDSRDVEMFETSLAEIV----KVHPDSNEYACLRAIVLFKTSFVDVNILC 292
G N+ + +F+ L+E+V ++ D E CLR+I+LF
Sbjct: 294 TGITVHRNSAQQAGVGTIFDRVLSELVSKMREMKMDRTELGCLRSIILFNP--------- 344
Query: 293 RGQSQIGSEYKRLQDLPAVAALQDHSQLVLNEYTTRTYPLDPSRLSQILQLLPVIKRVSN 352
E + L+ + V L++ L Y +P D R +++L LP I+ +
Sbjct: 345 --------EVRGLKSIQEVTLLREKIYGALEGYCRVAWPDDAGRFAKLLLRLPAIRSIGL 396
Query: 353 LIIVELFFRATIGEIPIERIIGDMYRTTKD 382
+ LFF IG++PI+ + +M + D
Sbjct: 397 KCLEYLFFFKMIGDVPIDDFLVEMLESRSD 426
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 106 bits (254), Expect = 4e-25
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 14 CAVCRDHSSGKHYGVFACDGCAGFFKRSVRRDRRYTCKARNPGGCVVDKAHRNQCRACRL 73
C++C D +SGKHYGV++C+GC GFFKR+VR+D Y C R C++DK RN+C+ CR
Sbjct: 110 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYAC--REEKSCIIDKRQRNRCQYCRY 167
Query: 74 AKCLDAGMNKDAVQHER 90
KCL GM ++AVQ ER
Sbjct: 168 QKCLAMGMKREAVQEER 184
Score = 58.4 bits (135), Expect = 1e-10
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 27/210 (12%)
Query: 183 MCEAAARLLFMNVKWAKNVPAFAXXXXXXXXXXXXXXWKDLFIIG-SAQFLYPLDLKILS 241
+C A + LF V WAK++P F W +L I S + + D +L+
Sbjct: 234 ICNATNKQLFQLVAWAKHIPHFTSLPLEDQVLLLRAGWNELLIASFSHRSIDVKDGIVLA 293
Query: 242 EG-----NARIDSRDVEMFETSLAEIV----KVHPDSNEYACLRAIVLFKTSFVDVNILC 292
G N+ + +F+ L+E+V ++ D E CLR+I+LF
Sbjct: 294 TGITVHRNSAQQAGVGTIFDRVLSELVSKMREMKMDRTELGCLRSIILFNP--------- 344
Query: 293 RGQSQIGSEYKRLQDLPAVAALQDHSQLVLNEYTTRTYPLDPSRLSQILQLLPVIKRVSN 352
E + L+ + V L++ L Y +P D R +++L LP I+ +
Sbjct: 345 --------EVRGLKSIQEVTLLREKIYGALEGYCRVAWPDDAGRFAKLLLRLPAIRSIGL 396
Query: 353 LIIVELFFRATIGEIPIERIIGDMYRTTKD 382
+ LFF IG++PI+ + +M + D
Sbjct: 397 KCLEYLFFFKMIGDVPIDDFLVEMLESRSD 426
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 89.8 bits (213), Expect = 3e-20
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 6/102 (5%)
Query: 2 ESMTGRILYD-----VPCAVCRDHSSGKHYGVFACDGCAGFFKRSVRRDRRYTCKARNPG 56
E++ GR+L + V C VC D +SG HYGV +C+GC GFF+RS+++ +Y +N
Sbjct: 50 ENLLGRVLAEFDGTTVLCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQ- 108
Query: 57 GCVVDKAHRNQCRACRLAKCLDAGMNKDAVQHERGPRNSTIR 98
C + + +RN+C+ CRL KC+ GM++DAV+ R P+ R
Sbjct: 109 QCSILRINRNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 150
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 80.6 bits (190), Expect = 2e-17
Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 14 CAVCRDHSSGKHYGVFACDGCAGFFKRSVRRDRRYTCKARNPGGCVVDKAHRNQCRACRL 73
C VC D +SG HY C+GC GFF+RS+ ++ Y CK N C +D R +C+ CRL
Sbjct: 187 CLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYQCKYGN--NCEIDMYMRRKCQECRL 244
Query: 74 AKCLDAGMNKDAVQHE 89
KCL GM + V E
Sbjct: 245 KKCLTVGMRPECVVPE 260
>AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor
protein.
Length = 72
Score = 59.7 bits (138), Expect = 4e-11
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 31 CDGCAGFFKRSVRRDRRYTCKARNPGGCVVDKAHRNQCRACRLAKCLDAGMNKDAVQHE 89
C+GC GFF+RS+ ++ Y CK N C +D R +C+ CRL KCL GM + + E
Sbjct: 1 CEGCKGFFRRSITKNAVYQCKYGN--NCEIDMYMRRKCQECRLKKCLTVGMRPECMVPE 57
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced
protein 75 protein.
Length = 87
Score = 46.0 bits (104), Expect = 5e-07
Identities = 19/49 (38%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 36 GFFKRSVRRDRRYTCKARNPGGCVVDKAHRNQCRACRLAKCLDAGMNKD 84
GFF+RS+++ +Y +N C + + +RN+C+ CRL KC+ GM++D
Sbjct: 40 GFFRRSIQQKIQYRPCTKNQQ-CSILRINRNRCQYCRLKKCIAVGMSRD 87
>AB264334-1|BAF44089.1| 30|Apis mellifera ecdysone-induced
protein 75 protein.
Length = 30
Score = 37.9 bits (84), Expect = 1e-04
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 12 VPCAVCRDHSSGKHYGVFACDGC 34
V C VC D +SG HYGV +C+GC
Sbjct: 7 VLCRVCGDKASGFHYGVHSCEGC 29
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 27.1 bits (57), Expect = 0.27
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 84 DAVQHERGPRNSTIRRQMALFLKDPALPTPEMGLTVPPPLDLAVP-KHNFMSPPQ 137
+AV+ ER R IR + L P+ P + P PLDLA+P + + PP+
Sbjct: 415 EAVEEER-QREYGIRVERDPILTPPS-SNPVSPVPSPDPLDLAIPVRETLILPPR 467
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 24.6 bits (51), Expect = 1.4
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 14 CAVCRDHSSGKHYGVFACDGCAGFFKRSVRRDRRYTC 50
C C HS YG C G+F R+ + ++ C
Sbjct: 279 CEACPAHSKSSDYGFTECRCDPGYF-RAEKDPKKMPC 314
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.4 bits (48), Expect = 3.3
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 268 DSNEYACLRAIVLFKTSF 285
++ EY+CL+ +LFK F
Sbjct: 224 NTGEYSCLKVDLLFKREF 241
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.4 bits (48), Expect = 3.3
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 268 DSNEYACLRAIVLFKTSF 285
++ EY+CL+ +LFK F
Sbjct: 224 NTGEYSCLKVDLLFKREF 241
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 22.2 bits (45), Expect = 7.7
Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 1/21 (4%)
Query: 17 CRDHSSGKHYG-VFACDGCAG 36
C + YG VFACDG G
Sbjct: 596 CAEEIGRGQYGIVFACDGWGG 616
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 22.2 bits (45), Expect = 7.7
Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 1/21 (4%)
Query: 17 CRDHSSGKHYG-VFACDGCAG 36
C + YG VFACDG G
Sbjct: 634 CAEEIGRGQYGIVFACDGWGG 654
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.324 0.138 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,010
Number of Sequences: 429
Number of extensions: 5248
Number of successful extensions: 34
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 18
length of query: 384
length of database: 140,377
effective HSP length: 59
effective length of query: 325
effective length of database: 115,066
effective search space: 37396450
effective search space used: 37396450
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 45 (22.2 bits)
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