Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001999-TA|BGIBMGA001999-PA|IPR003578|Ras small GTPase,
Rho type, IPR003577|Ras small GTPase, Ras type, IPR003579|Ras small
GTPase, Rab type, IPR013753|Ras
(186 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08) 75 4e-14
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 5e-12
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 67 7e-12
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 62 4e-10
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 59 3e-09
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 59 3e-09
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 3e-09
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 58 4e-09
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 53 2e-07
SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32) 53 2e-07
SB_1750| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 48 6e-06
SB_16780| Best HMM Match : Ras (HMM E-Value=6.7e-05) 48 6e-06
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 46 2e-05
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 45 3e-05
SB_39298| Best HMM Match : Ras (HMM E-Value=0.11) 44 1e-04
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 43 1e-04
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 43 2e-04
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 43 2e-04
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 42 2e-04
SB_58962| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 42 3e-04
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 42 4e-04
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 42 4e-04
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 41 7e-04
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 39 0.003
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 38 0.005
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.009
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 37 0.009
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 37 0.012
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 37 0.012
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 36 0.015
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 36 0.020
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 36 0.020
SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09) 35 0.047
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 34 0.082
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 34 0.082
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 33 0.11
SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05) 33 0.11
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.25
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 32 0.33
SB_38635| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049) 31 0.44
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 31 0.58
SB_54577| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_5579| Best HMM Match : NODP (HMM E-Value=6.1) 31 0.77
SB_3552| Best HMM Match : PH (HMM E-Value=0.15) 30 1.3
SB_30759| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_40202| Best HMM Match : Peptidase_M56 (HMM E-Value=4.4) 29 3.1
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 29 3.1
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_22649| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_14462| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045) 27 9.4
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_87| Best HMM Match : HSP90 (HMM E-Value=9.4e-10) 27 9.4
>SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08)
Length = 155
Score = 74.9 bits (176), Expect = 4e-14
Identities = 40/119 (33%), Positives = 68/119 (57%), Gaps = 3/119 (2%)
Query: 8 LTVRFLTKRYIGEYDHQQDSKYKHEALLDGEPILFEILDTCPKSLNEIPGNEIAQWADGL 67
LTVRF+T+R+IGEYD ++ Y+H + G+ I +++DT K+ + + + + A+ +
Sbjct: 2 LTVRFITRRFIGEYDPCLEASYRHHLTVHGQYIAMDVVDTAGKNTPD-KVDALLEAANIV 60
Query: 68 FLVYSITDRESFNYVRRAKQSLQPEIPLTLVGNKADMVHLRQVSPEEGEILAKDFECSF 126
+L+YS+TDR SF + +Q +V D+ HL QV EG LA++ + F
Sbjct: 61 YLLYSVTDRASFEEAAWLARRIQQN--KAIVATNKDLKHLSQVLEYEGRFLAQELDGLF 117
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 67.7 bits (158), Expect = 5e-12
Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 28/148 (18%)
Query: 6 TTLTVRFLTKRYIGEYDHQQDSKYKHEALLDGEPILFEILDTCPKSLNEI---------- 55
+ TVR LT+R+IGEYD + YKH +DG+ + ++LDT K E
Sbjct: 195 SAFTVRALTRRFIGEYDPFLELNYKHSMEIDGQYLALDVLDTAGKVSREARMSPRQKTKT 254
Query: 56 -----PGN------EIAQWADGLFLVYSITDRESFNYVRRAKQ------SLQPEIPLTLV 98
GN ++ + FL+YS TD+ SF + ++ P LT+V
Sbjct: 255 GQLAPTGNSEEKLERASENTEIYFLLYSTTDKRSFTEAEEIAEYLFETKNIDPS-TLTIV 313
Query: 99 GNKADMVHLRQVSPEEGEILAKDFECSF 126
K D+VH+R+V EG LA+++ C+F
Sbjct: 314 ATKKDLVHMREVDEYEGRFLAQNYGCAF 341
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 67.3 bits (157), Expect = 7e-12
Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Query: 6 TTLTVRFLTKRYIGEYDHQQDSKYKHEALLDGEPILFEILDTCPKSLNEIPGNEIAQWAD 65
+ LT++F+ ++ +YD + Y+ + ++D +ILDT + + + +
Sbjct: 25 SALTIQFIQSHFVSDYDPTIEDSYRKQCVIDERVAHLDILDTAGQEEFSAMREQYMRSGE 84
Query: 66 GLFLVYSITDRESFNYVRRAKQSL-----QPEIPLTLVGNKADMVHLRQVSPEEGEILAK 120
G LV+S+TDR SF + + + + E P+ + GNK+D+ + R VS EG+ LA+
Sbjct: 85 GFLLVFSVTDRSSFEEINKFYNQILRVKDRTEFPMIICGNKSDLEYERTVSTAEGQELAR 144
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 61.7 bits (143), Expect = 4e-10
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 65 DGLFLVYSITDRESFNYVRRAKQSLQ-----PEIPLTLVGNKADMVHLRQVSPEEGEILA 119
+G ++YSITDR SFN + K ++ +IP+ LVGNK D+ R+V+ +EG+ LA
Sbjct: 10 EGFIIIYSITDRSSFNLAAQYKDQIERVRRTDDIPIVLVGNKDDLEGKREVTTQEGQELA 69
Query: 120 KDFECSFXXXXXXXXXXXXXXXFHELCREVLTLRRRAKHSL 160
F+C F FH L RE+ R++ K L
Sbjct: 70 HRFDCPF-FETSACQRHFVDDAFHGLVREI---RKKEKQRL 106
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 58.8 bits (136), Expect = 3e-09
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 6 TTLTVRFLTKRYIGEYDHQQDSKYKHEALLDGEPILFEILDTCPKSLNEIP-GNEIAQWA 64
T L VRFL R++GEYD + KY+ +D + EILDT + N ++ +
Sbjct: 19 TALLVRFLCHRFLGEYDPTIEDKYRKSINIDDVTVTLEILDTASRGQNSCKLRDQFVREG 78
Query: 65 DGLFLVYSITDRESFNYVRRAKQSLQPEIPLTLVGNK 101
DG +VYS DR +F + R + ++ L N+
Sbjct: 79 DGFIVVYSTADRSTFANLHRYRDMMKLSRDTNLPSNR 115
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 93 IPLTLVGNKADMVHLRQVSPEEGEILAKDFECSFXXXXXXXXXXXXXXXFHELCREVLTL 152
I + ++GNK+D++ R V+ +EG+ LA+ + F +L R+++
Sbjct: 140 ISVLVIGNKSDLIGERDVTRDEGQRLAETYGWLF-AEASALEYEAADACIADLVRDMMAK 198
Query: 153 RRRAKH 158
R H
Sbjct: 199 RSMRNH 204
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 58.8 bits (136), Expect = 3e-09
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 6 TTLTVRFLTKRYIGEYDHQQDSKYKHEALLDGEPILFEILDTCPKSLNEIPGNEIAQWAD 65
+ LTV+F+T +++ +YD + Y+ E +D P + EILDT + +
Sbjct: 17 SALTVQFVTGQFVEKYDPTIEDFYRKEIEVDNNPSILEILDTAGTEQFASMRDLYIKNGQ 76
Query: 66 GLFLVYSITDRESFNYVRRAKQSL-----QPEIPLTLVGNKADMVHLRQVS 111
G LVYS+ +R++F ++ + + +P+ LVGNK+D+ R+VS
Sbjct: 77 GFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYDEREVS 127
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 58.4 bits (135), Expect = 3e-09
Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 13/151 (8%)
Query: 6 TTLTVRFLTKRYIGEYDHQQDSKYKHEALLDGEPILFEILDTCPKSLNEIPGNEIAQWAD 65
+ L VRF T R+I EYD + Y A +D +P I DT + ++Q +
Sbjct: 141 SALLVRFCTGRFIHEYDPTLEMTYDVSATIDEDPATLHITDTA----STYEPVYLSQ-NE 195
Query: 66 GLFLVYSITDRESF-------NYVRRAKQSLQPEIPLTLVGNKADMVHLRQVSPEEGEIL 118
G +VYSI + +F +R K+ + L GNK D+ H R VS +E
Sbjct: 196 GFIVVYSINELRTFETAKQLVKLIREIKKQKALTTLIVLAGNKCDLKHCRAVSRQEAREF 255
Query: 119 AKDFECSFXXXXXXXXXXXXXXXFHELCREV 149
A + EC F FH+ R++
Sbjct: 256 AAEHECVF-HETSAANNINTKVIFHDCVRQI 285
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 58.0 bits (134), Expect = 4e-09
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 6 TTLTVRFLTKRYIGEYDHQQDSKYKHEALLDGEPILFEILDTCPKSLNEIPGNEIAQWAD 65
+ LTVRFLTKR+IGEYD +S Y+ +A + GE + E+ DT ++ + + +
Sbjct: 875 SALTVRFLTKRFIGEYDDTLESTYRQDAEVAGEVVAIELTDTAGEN-SPAKLERCLEIGE 933
Query: 66 GLFLVYSITDRESFNYVRRAKQSLQPE 92
++YSIT R SF+ R ++ E
Sbjct: 934 VFVVLYSITSRHSFDEASRIGTYIKKE 960
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 52.8 bits (121), Expect = 2e-07
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 28 KYKHEALLDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESF----NYVR 83
K K A GEP +F+ + + EIP + I + G+ LVY IT+ +SF N++R
Sbjct: 54 KAKEAAKTKGEPTIFDKILS-----KEIPADIIYEDDKGIMLVYDITNDKSFEKHQNWIR 108
Query: 84 RAKQSLQPEIPLTLVGNKADMVHLRQVSPEEGE 116
++ ++ ++GNK DM RQVS E GE
Sbjct: 109 NIEEHASQDVEKMVLGNKCDMEDRRQVSKERGE 141
>SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32)
Length = 1168
Score = 52.8 bits (121), Expect = 2e-07
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 38 EPILFEILD-TCPKSLN-EIPGNEIAQWADGLFLVYSITDRESF----NYVRRAKQSLQP 91
+P +LD CP E + W D L+YSIT RESF NY S++
Sbjct: 1031 QPFPVSLLDFACPSGAGGERMLEDRVTWGDAFVLIYSITSRESFHAVWNYYYHVVTSIEA 1090
Query: 92 EIPLTLVGNKADMVHLRQVSPEEGEILAKDFECSF 126
+ + L+ NK D+ H R+V EG +A+ +C F
Sbjct: 1091 KPVIVLLANKHDLGHKRKVLTTEGRQMAQAIKCPF 1125
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Query: 8 LTVRFLTKRYIGEYDHQQ 25
+ VRF TKR+IGEYD Q
Sbjct: 857 VAVRFATKRFIGEYDSSQ 874
>SB_1750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 6/103 (5%)
Query: 63 WADGLFLVYSITDRESFNYVRRAKQSLQP------EIPLTLVGNKADMVHLRQVSPEEGE 116
W D LVYSIT +SF + Q L L +V NK D R+VS +G
Sbjct: 87 WGDAFLLVYSITSLQSFTDISCIIQQLTAMRTQGSHALLAIVANKTDAESQREVSTSDGV 146
Query: 117 ILAKDFECSFXXXXXXXXXXXXXXXFHELCREVLTLRRRAKHS 159
LA+ CSF F E+ +E + +R + S
Sbjct: 147 ALAQSLPCSFSEISTSTSYEDVERVFTEIIQEAVKFKRATQCS 189
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 47.6 bits (108), Expect = 6e-06
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 6 TTLTVRFLTKRYIGEYDHQQDSKYKHEALLDGEPILFEILDT 47
+ LTVRFLT+R+IGEYD +S ++H +D E + +I DT
Sbjct: 30 SALTVRFLTRRFIGEYDQTLESTHRHILQIDNEDVSLDISDT 71
Score = 44.4 bits (100), Expect = 6e-05
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 57 GNEIAQWA--DGLFLV-YSITDRESFNYVRRAKQSLQPE-----IPLTLVGNKADMVHLR 108
G+++ +W L+LV YSI DR SF+ R + ++ + + +V K D+ HLR
Sbjct: 117 GDKLRRWTRRGDLYLVLYSIVDRSSFDEARWIARYVKDHRNTDSMSMVIVATKKDLDHLR 176
Query: 109 QVSPEEGEILAKDFECSFXXXXXXXXXXXXXXXFHELCREV 149
+V EEG + + +C+F HEL + +
Sbjct: 177 RVDIEEGLGFSNELDCTFYEVSISEGYNEVQELLHELLKRI 217
>SB_16780| Best HMM Match : Ras (HMM E-Value=6.7e-05)
Length = 138
Score = 47.6 bits (108), Expect = 6e-06
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Query: 67 LFLV-YSITDRESFNYVRRAKQSLQ----PEIP-LTLVGNKADMVHLRQVSPEEGEILAK 120
+FL+ YSI DR SF+ R + L+ PE L L+G K D+ HLR++ EG LA+
Sbjct: 1 MFLILYSIVDRTSFDEASRIARYLKWRKFPETGVLILIGTKRDLGHLREIDETEGSELAE 60
Query: 121 DFECSF 126
+ EC F
Sbjct: 61 ELECPF 66
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 37 GEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFN----YVRRAKQSLQPE 92
G+ I +I DT + + A G+ LVY +T+ +SF+ ++++ +
Sbjct: 2 GKKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISKWLKKIDDHANED 61
Query: 93 IPLTLVGNKADMVHLRQVSPEEGEILAKDFECSF 126
+ LVGNK DM R +S +GE LA + SF
Sbjct: 62 VKRMLVGNKCDMYDKRVISQTKGEQLASSYGISF 95
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 45.2 bits (102), Expect = 3e-05
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESF----NYVRRAKQSLQ 90
LD + FEI DT + + A +VY IT++++F +V+ ++
Sbjct: 65 LDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQAS 124
Query: 91 PEIPLTLVGNKADMVHLRQVSPEEGEILAKD 121
P I + L GNKAD+ R V E+ + A+D
Sbjct: 125 PNIVIALSGNKADLASKRMVEYEDAQSYAED 155
>SB_39298| Best HMM Match : Ras (HMM E-Value=0.11)
Length = 64
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 62 QWADGLFLVYSITDRESFNYVRRAKQSL-----QPEIPLTLVGNKADMVHLR 108
+WAD +VYSITD+ SFN + +++ E+ + LVGNK D+ H R
Sbjct: 11 RWADAFIVVYSITDKNSFNTAVQLVEAVYYGKGTDEVHVALVGNKTDLEHFR 62
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRRAKQSLQ---- 90
LDG+ I +I DT + + + A G+ +VY +TD+ESFN V++ Q +
Sbjct: 73 LDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYAC 132
Query: 91 PEIPLTLVGNKADM 104
+ LVGNK D+
Sbjct: 133 ENVNKLLVGNKCDL 146
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 43 EILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRRAKQSLQ-----PEIPLTL 97
+ILDT + ++ + +G V+++ + +SF + + ++ ++ E+P+ L
Sbjct: 280 DILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDINQYREQIKRVKDAEEVPMVL 339
Query: 98 VGNKADMVHLRQVSPEEGEILAKDFECSFXXXXXXXXXXXXXXXFHELCREV 149
VGNK D+ R VS + + LAK + F F+ L RE+
Sbjct: 340 VGNKCDLPQ-RTVSTSDAQELAKSYNIPF-QETSAKTRQGVDDAFYTLVREI 389
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 58 NEIAQW-ADGLFLVYSITDRESFN----YVRRAKQSLQPEIPLTLVGNKADMVHLRQVSP 112
N+I + A+G+ LVY IT ++F+ ++R ++ ++ ++GNK DM R VS
Sbjct: 118 NDICTFVAEGIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILGNKCDMDDRRIVSR 177
Query: 113 EEGEILAKDFECSF 126
E GE +A++ F
Sbjct: 178 ERGEQIAREHGIRF 191
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRR----AKQSLQ 90
++G+ I ++ DT + + + A G LVY +T +++F V R ++
Sbjct: 56 VEGKIIKAQVWDTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHAD 115
Query: 91 PEIPLTLVGNKADMVHLRQVSPEEGE 116
P I + LVGNK D+ HLR V+ ++ +
Sbjct: 116 PTIVVMLVGNKCDLKHLRAVASDDAK 141
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 66 GLFLVYSITDRESF----NYVRRAKQSLQP-EIPLTLVGNKADMVHLRQVSPEEGEILAK 120
G ++Y IT+R+SF ++ + AKQ ++ E+ LVG+K D R VS EEGE A+
Sbjct: 89 GCLIIYDITNRDSFVNVMDWYKEAKQCVEEAEVVFMLVGHKIDKESKRVVSTEEGECFAE 148
Query: 121 DFECSF 126
F
Sbjct: 149 AHNMMF 154
>SB_58962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 59
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 29 YKHEALLDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVR 83
Y+H ++DG+ I +I+DT K+ E + +A+ F+VYS+TDR SF+ R
Sbjct: 4 YRHHLIVDGQFISLDIMDTAGKNSVEKMSTCLT-FAELFFIVYSVTDRTSFDEAR 57
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 41.9 bits (94), Expect = 3e-04
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 37 GEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFN----YVRRAKQSLQPE 92
G+ + +I DT + + A G LVY I+ RE+FN ++ A+ P
Sbjct: 141 GKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSLTNWLTDARTLASPN 200
Query: 93 IPLTLVGNKADMVHLRQVSPEEGEILAKDFECSF 126
I + LVGNK D+ R+V+ E A++ E F
Sbjct: 201 IVIILVGNKKDLDADREVTFLEASRFAQENELMF 234
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 41.5 bits (93), Expect = 4e-04
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 5/126 (3%)
Query: 6 TTLTVRFLTKRYIGEYDHQQDSKYKHEAL-LDGEPILFEILDTCPKSLNEIPGNEIAQWA 64
++L +RF + Y +K L +DG+ I +I DT + + A
Sbjct: 22 SSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQERFRTLTTAYYRSA 81
Query: 65 DGLFLVYSITDRESF----NYVRRAKQSLQPEIPLTLVGNKADMVHLRQVSPEEGEILAK 120
G+ L+Y + + E+F ++ + + LVGNK D++ RQV + A+
Sbjct: 82 HGIVLIYDVNESETFLHLSQWLEEVSEYACEGVNTILVGNKCDLIDCRQVGYNTAKEFAE 141
Query: 121 DFECSF 126
+ SF
Sbjct: 142 KLDISF 147
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 66 GLFLVYSITDRESFNYVRRAKQSL-----QPEIPLTLVGNKADMVHLRQVSPEEGEILAK 120
G LVYS+ +R++F ++ + + +P+ LVGNK+D+ R+VS E + LA+
Sbjct: 61 GFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYDEREVSVGEAKDLAE 120
Query: 121 DFECSF 126
+ C F
Sbjct: 121 AWGCPF 126
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 40.7 bits (91), Expect = 7e-04
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 29 YKHEALLDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRRAKQS 88
Y+ E + + +ILDT N DG +VYSITD S+ R+ +
Sbjct: 4 YEKELRIGDSSMELDILDTAGNGEASYIHN-----GDGFVVVYSITDYYSYEMARQLVKL 58
Query: 89 LQP--------EIPLTLVGNKADMVHLRQVSPEEGEILAKDFECS 125
+ +IP+ LVGNK D+ R V+ +E A ++ CS
Sbjct: 59 VTQVRKTDDICQIPIVLVGNKRDLRRGRCVAKDEAREFASEYGCS 103
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESF----NYVRRAKQSLQ 90
+DGE + +I DT + ADG+ + Y IT+++SF ++ +
Sbjct: 51 VDGEKVKLQIWDTAGQERFRSITQSYYHNADGVIVTYDITNKKSFESLPQWLDDTNRYTS 110
Query: 91 PEIPLTLVGNKADMVHLRQVSPEEGEILAK 120
++ + +VGNK+D+ R+V ++L K
Sbjct: 111 KDVLIAIVGNKSDLSTNRKVDFHHAKLLLK 140
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 59 EIAQWADGLFLVYSITDRESFNYVRRAKQSLQPEIPLTLVGNKADMVHLRQVSPEE 114
++ + G+ ++ IT +F YVRR + P IP+ ++ N+ DM R V EE
Sbjct: 276 DVYKGTHGVLMLLDITKPWTFTYVRRELPKVPPHIPVLVLANRRDMEEHRLVDAEE 331
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 37.9 bits (84), Expect = 0.005
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 64 ADGLFLVYSITDRESF----NYVRRAKQSLQPEIPLTLVGNKADMVHLRQVSPEEGEILA 119
A G LVY I SF +V +Q ++ + L+GNK+D+ HLR + G+ A
Sbjct: 16 AMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLKHLRMIENRRGKQFA 75
Query: 120 KD 121
+
Sbjct: 76 AE 77
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 37.1 bits (82), Expect = 0.009
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 66 GLFLVYSITDRESFNYVRRAKQSLQ----PEIPLTLVGNKADMVHLRQVSPEEGEILAKD 121
G+ LVY IT +SF ++ + Q+++ P + L+GNK D R + + G + +D
Sbjct: 4 GILLVYDITTEDSFKHISQWLQNIEDNASPNVCKVLLGNKLDAEDERVIDAQRGRSVGED 63
Query: 122 FECSF 126
F
Sbjct: 64 NNLEF 68
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 37.1 bits (82), Expect = 0.009
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 7/111 (6%)
Query: 6 TTLTVRFLTKRYIGEYDHQQDSKYKHEALLDGEPILF-EILDTCPKSLNEIPGNEIAQWA 64
T+L RF++ + +Y Y+ L + F EI+DT Q A
Sbjct: 121 TSLVKRFISGTFSEQYTPTVGDLYEKSVTLSKDFNAFLEIMDTAGSYPFPAMKKLTIQNA 180
Query: 65 DGLFLVYSITDRESFNYVRRAKQSLQ----PEIPLTLVGNKADMV--HLRQ 109
D LVYS+ ++ S ++ + +P+ LVGNK D+V LRQ
Sbjct: 181 DAFVLVYSVDEKASLQEALELQREIVYIKGKTVPMVLVGNKTDLVSEELRQ 231
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 36.7 bits (81), Expect = 0.012
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 34 LLDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESF----NYVRRAKQSL 89
++DG+ ++ DT + + ADG+ L+Y +T SF ++V ++S
Sbjct: 485 VVDGKTYALQLWDTAGQERFRSIAKSYFRKADGVLLLYDVTCETSFLDVRDWVEAIEESC 544
Query: 90 QPEIPLTLVGNKADM 104
+P+ L GNK D+
Sbjct: 545 SKPVPIMLCGNKIDI 559
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 36.7 bits (81), Expect = 0.012
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 64 ADGLFLVYSITDRESF----NYVRRAKQSLQPEIPLTLVGNKADMVHLRQVSPEEG 115
A G LVY I SF +V +Q ++ + L+GNK+D+ HLR + G
Sbjct: 16 AMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLKHLRMIENRRG 71
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 36.3 bits (80), Expect = 0.015
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 31 HEALLDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRR------ 84
H+ LDG+ + ++ DT + + ADG LV+ ++ +ESF+ +R
Sbjct: 50 HDFDLDGKKVKLQLWDTAGEEKYRALSRSFFRGADGALLVFDVSVKESFDSIRDYWLHEF 109
Query: 85 AKQSLQPEIPLTLVGNKADMVHLRQVSPEEGEILAKDFECSF 126
K S I + LVGNK D ++VS E+ + L+ + S+
Sbjct: 110 HKVSGSDTITI-LVGNKCDKKD-KKVSEEDIQNLSSCYNLSW 149
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 35.9 bits (79), Expect = 0.020
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 64 ADGLFLVYSITDRESFNYVRRAKQSLQPE----IPLTLVGNKADMVHLRQVSPEEGEILA 119
A G LVY I ++ V R + L+ I + LVGNK+D+ HLR V +E + A
Sbjct: 6 AVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAKAFA 65
Query: 120 K 120
+
Sbjct: 66 E 66
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 35.9 bits (79), Expect = 0.020
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 64 ADGLFLVYSITDRESFN----YVRRAKQSLQPEIPLTLVGNKADMVHLRQVSPEEGE 116
A G+ +VY IT RES+N ++ + + + LVGNK D+ R+V P+ +
Sbjct: 392 AHGVMIVYDITKRESYNNLHKWLMEVETYASEGVHMILVGNKIDLDTDREVQPDAAQ 448
>SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09)
Length = 123
Score = 34.7 bits (76), Expect = 0.047
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 92 EIPLTLVGNKADMVHLRQVSPEEGEILAKDFECSF 126
++ + LVGNK D+ RQV+ EEGE AK+ F
Sbjct: 31 DVIIMLVGNKTDLSDKRQVTAEEGERKAKELNVMF 65
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 33.9 bits (74), Expect = 0.082
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Query: 65 DGLFLVYSITDRESFNYVRRAKQSLQPEIPLT----LVGNKADMVHLRQVSPEEGEILAK 120
+G+ + Y IT ++F V R + +Q P LVGNK D+ R+VS E+ A
Sbjct: 120 NGVIIAYDITKCDTFKNVIRWGEDVQKYAPENAIKLLVGNKKDLEREREVSLEDAVNCAS 179
Query: 121 DFECSFXXXXXXXXXXXXXXXFHELCREV 149
+ F+ L RE+
Sbjct: 180 HYGMLDVLETSAKDATNIEAAFYRLAREL 208
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 33.9 bits (74), Expect = 0.082
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Query: 66 GLFLVYSITDRESFN----YVRRAKQSLQPEIPLTLVGNKAD 103
G +V+ +TDR+SF ++ + ++ EIP+ LVGNK D
Sbjct: 48 GAVIVFDVTDRKSFERVPTWLDKVQEHCGHEIPVVLVGNKTD 89
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/69 (21%), Positives = 33/69 (47%)
Query: 6 TTLTVRFLTKRYIGEYDHQQDSKYKHEALLDGEPILFEILDTCPKSLNEIPGNEIAQWAD 65
++LT++F+ +++ YD ++ + G+ E++DT + I +
Sbjct: 20 SSLTIQFVEGQFVDSYDPTIENTFTKNIKYKGQEFFLELVDTAGQDEYSIFPQSYSMGIH 79
Query: 66 GLFLVYSIT 74
G LVY++T
Sbjct: 80 GYILVYAVT 88
>SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05)
Length = 152
Score = 33.5 bits (73), Expect = 0.11
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 66 GLFLVYSITDRESFNYVR-----RAKQSLQPEIPLTLVGNKADMVHLRQVSPEEGE 116
G+ LVY IT R+SF+ ++ K LQ E + LVGNK D+ R+V +GE
Sbjct: 58 GILLVYDITCRKSFDNLQFWLESIRKNKLQYE-EILLVGNKCDVGDDREVPKRKGE 112
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 32.3 bits (70), Expect = 0.25
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 29 YKHEALLDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRRA--- 85
Y +DG+ + DT IP Q+A L + I +RESF +
Sbjct: 46 YSKTMEIDGKRYTVLLCDTPGTMHPRIPPQHWFQYASVFLLCFDIANRESFANIESTWLP 105
Query: 86 KQSLQ-PEIPLTLVGNKADMVHLRQVSPEEGE 116
+L+ ++P LVGNK ++ +Q S + G+
Sbjct: 106 HVNLETSDVPKVLVGNKMELRCSQQESTDLGQ 137
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 31.9 bits (69), Expect = 0.33
Identities = 13/17 (76%), Positives = 15/17 (88%)
Query: 6 TTLTVRFLTKRYIGEYD 22
+ LTVR LTKR+IGEYD
Sbjct: 30 SALTVRLLTKRFIGEYD 46
>SB_38635| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 20
Score = 31.9 bits (69), Expect = 0.33
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 8 LTVRFLTKRYIGEYD 22
LTVR LT+RYIGEYD
Sbjct: 2 LTVRLLTRRYIGEYD 16
>SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049)
Length = 51
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 95 LTLVGNKADMVHLRQVSPEEGEILAKDF-ECSF 126
+ LVGNK D+ R V ++G+ LAK F C+F
Sbjct: 1 MVLVGNKCDLEDERVVGKDQGQNLAKQFANCTF 33
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRRAKQSLQ---P 91
+DGE + +I DT + + + G+ +VY +T ++F V+R +
Sbjct: 21 IDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADTFVNVKRWLHEIDQNCD 80
Query: 92 EIPLTLVGNKAD 103
++ LVGNK D
Sbjct: 81 DVIRILVGNKDD 92
>SB_54577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 30.7 bits (66), Expect = 0.77
Identities = 14/21 (66%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Query: 10 VRFLTKRYIGEYDHQ-QDSKY 29
VRFLT+R+IGEYD +SKY
Sbjct: 42 VRFLTRRFIGEYDKDLGESKY 62
>SB_5579| Best HMM Match : NODP (HMM E-Value=6.1)
Length = 69
Score = 30.7 bits (66), Expect = 0.77
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 70 VYSITDRESFNYVRRAKQSLQPEIPLTLVGNKADMVHLRQVSP 112
+Y+ D SF+ + + ++ L +P V K+D+ ++QV P
Sbjct: 24 LYNSNDAASFSQIVQLREKLPKTLPCLFVATKSDLTTVKQVFP 66
>SB_3552| Best HMM Match : PH (HMM E-Value=0.15)
Length = 486
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 62 QWADGLFLVYSITDRESFN-----YVRRAKQSLQPEIPLTLVGNKA 102
QW D + V+S+ D S+N Y + A+ ++P+ LV KA
Sbjct: 3 QWVDAVIFVFSLDDELSYNVISGYYAKMAQYRNISDVPILLVAMKA 48
>SB_30759| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 75 DRESFNYVRRAKQSLQPEIPLTLVGNKADMVHLRQVSPEEGEILAK 120
D S ++RR LQ G + D+ HLRQ EGE++ K
Sbjct: 95 DEVSARHLRRRVSHLQKVGGRLSAGGERDIHHLRQKEKNEGEVVLK 140
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 64 ADGLFLVYSITDRESFNYVRRAK----QSLQPEIPLTLVGNKADMVHLRQVSPEEGE 116
AD L + +T+R SF V + + ++PL LVG K + V R+VS + E
Sbjct: 97 ADLFILCFDVTNRASFENVASKWFPEIRLYEKKVPLMLVGLKPNPVEKRKVSKADAE 153
>SB_40202| Best HMM Match : Peptidase_M56 (HMM E-Value=4.4)
Length = 180
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 59 EIAQWADGLFLVYSITDRESFNYVRRAKQSLQPEIPLTLVGNKADMV 105
++ + G+ ++ IT +F YVRR + P IP+ ++ +K +V
Sbjct: 15 DVYKGTHGVLMLLDITKPWTFTYVRRELPKVPPHIPVLVLVSKPCIV 61
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 64 ADGLFLVYSITDRESFNYVRRAKQSLQ----PEIPLTLVGNKADMVHLRQVSPEEGEILA 119
A LVY IT +F+ +R + LQ +I + + GNK D R V ++ + A
Sbjct: 33 AAAAILVYDITIESTFHSLRPWIRELQRYGPQDIVIAVAGNKCDKADQRDVQVQDAQDFA 92
Query: 120 KDFECSF 126
+ F
Sbjct: 93 GSVDAIF 99
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 28.3 bits (60), Expect = 4.1
Identities = 25/100 (25%), Positives = 36/100 (36%), Gaps = 4/100 (4%)
Query: 14 TKRYIGEYDHQQDSKYKHEALLDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSI 73
T + GEY Y +LDG+ + DT + + D + + I
Sbjct: 27 TNAFPGEYIPTVFDNYSSNIMLDGKAYNVGLWDTAGQEDYDRLRPLSYPMTDVFLVCFDI 86
Query: 74 TDRESFNYVRRA----KQSLQPEIPLTLVGNKADMVHLRQ 109
R SF + PE P LVGNK D+ +Q
Sbjct: 87 GSRTSFENIESKWLPELNHHMPETPKILVGNKRDLRSAQQ 126
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 28.3 bits (60), Expect = 4.1
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 6/104 (5%)
Query: 6 TTLTVRFLTKRYIGEYDHQQDSKYKHEALLDGEPILFEILDTC-PKSLNEIPGNEIAQWA 64
T L + + T ++ EY Y ++ GEP + DT + + + Q
Sbjct: 17 TCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQ-T 75
Query: 65 DGLFLVYSITDRESFNYVRR--AKQSLQ--PEIPLTLVGNKADM 104
D + +S+ SF V+ + P+ P LVG + D+
Sbjct: 76 DVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQVDL 119
>SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6500
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Query: 37 GEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRRAKQSLQPEIPLT 96
G P + ++L + K +E + + L+ + + ++ A Q ++ +
Sbjct: 1770 GRPAIDKVLTSAAKLFKSQTPSEPSTKKALVILIDKKSGTTPADIIKAATPLEQDKVKVV 1829
Query: 97 LV--GNKADMVHLRQVSPEEGEILAKD 121
V GN+AD+ L VSPE+G + D
Sbjct: 1830 AVAIGNEADVSELGNVSPEKGSTIKGD 1856
>SB_22649| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 27.5 bits (58), Expect = 7.1
Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 86 KQSLQPEIPLTLVGNKADMVHLRQVSPEEGEILAKDFECS-FXXXXXXXXXXXXXXXFHE 144
K+ + IP+ LVGNKAD L+ ++ +E + D F
Sbjct: 6 KKDVAKSIPILLVGNKAD--KLKLLTGDEDSVSGYDGPTEIMKILEQAAIQHGFFDVFFA 63
Query: 145 LCREVLTLRRRAKHSLLDRMLGSKSACRV 173
C + + +L++ M K AC V
Sbjct: 64 DCNQPIETIENTSTALIESMANFKRACSV 92
>SB_14462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/56 (30%), Positives = 24/56 (42%)
Query: 6 TTLTVRFLTKRYIGEYDHQQDSKYKHEALLDGEPILFEILDTCPKSLNEIPGNEIA 61
TT+ ++ L Y GE+D D E LDG P I+ P N++A
Sbjct: 280 TTIILKQLIGHYAGEFDVGDDQFMIEEIPLDGGPARRRIVRISPSGQQFEEPNKLA 335
>SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045)
Length = 100
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 86 KQSLQPEIPLTLVGNKADMVHLRQVSPEEGEILAKDFECSF 126
+ + + E LVGNK + R+VS EG LAK+ F
Sbjct: 2 QHNCEQEAKAVLVGNKCHLDCEREVSVAEGRGLAKELGLPF 42
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 64 ADGLFLVYSITDRESF----NYVRRAKQSLQPEIPLTLVGNKADM 104
AD + LV+ IT+R +F ++ ++ I LVGNK D+
Sbjct: 84 ADAVILVFDITNRGTFASIPQWLMNVQKYTNKNILKVLVGNKTDL 128
>SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 13 LTKRYIGEYDHQQDSKYKHEALLDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFL 69
L K+ ++QD K+ L E LD CP SL E P ++ + + G+F+
Sbjct: 113 LQKKQSKGKSNKQDKNKKNTEDLPSETAPIVALDNCPISLKESP-VKVTKTSGGVFI 168
>SB_87| Best HMM Match : HSP90 (HMM E-Value=9.4e-10)
Length = 739
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 7 TLTVRFLTKRYIGEYDHQQD------SKYKHEALLDGEPILFEILDTCPKSLNEI 55
TLT L + Y+ Q D KY+++A++ E L E DT PK+ E+
Sbjct: 499 TLTNLLLMSLVLFSYNEQDDVVLHYLRKYENKAVISAENFLSEAEDTKPKNEPEV 553
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.321 0.137 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,849,328
Number of Sequences: 59808
Number of extensions: 209687
Number of successful extensions: 425
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 347
Number of HSP's gapped (non-prelim): 70
length of query: 186
length of database: 16,821,457
effective HSP length: 78
effective length of query: 108
effective length of database: 12,156,433
effective search space: 1312894764
effective search space used: 1312894764
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)
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