Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001999-TA|BGIBMGA001999-PA|IPR003578|Ras small GTPase,
Rho type, IPR003577|Ras small GTPase, Ras type, IPR003579|Ras small
GTPase, Rab type, IPR013753|Ras
(186 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g35860.1 68417.m05093 Ras-related GTP-binding protein, putati... 64 4e-11
At4g17170.1 68417.m02583 Rab2-like GTP-binding protein (RAB2) id... 61 4e-10
At4g17160.1 68417.m02582 Ras-related GTP-binding protein, putati... 56 2e-08
At5g59150.1 68418.m07413 Ras-related GTP-binding protein, putati... 52 2e-07
At5g59840.1 68418.m07503 Ras-related GTP-binding family protein ... 52 3e-07
At3g53610.2 68416.m05922 Ras-related GTP-binding protein, putati... 52 3e-07
At3g53610.1 68416.m05921 Ras-related GTP-binding protein, putati... 52 3e-07
At5g45130.1 68418.m05540 Ras-related protein (RHA1) / small GTP-... 51 4e-07
At3g11730.1 68416.m01439 Ras-related GTP-binding protein, putati... 51 4e-07
At3g46830.1 68416.m05083 Ras-related protein (RAB11A) / small GT... 51 5e-07
At3g46060.1 68416.m04984 Ras-related protein (ARA-3) / small GTP... 51 5e-07
At3g09900.1 68416.m01180 Ras-related GTP-binding protein, putati... 50 1e-06
At5g03520.1 68418.m00308 Ras-related GTP-binding protein, putati... 49 2e-06
At1g07410.1 68414.m00790 Ras-related GTP-binding protein, putati... 49 2e-06
At3g54840.1 68416.m06076 Rab GTPase (ARA6) identical to small GT... 48 5e-06
At3g07410.1 68416.m00883 Ras-related GTP-binding family protein ... 47 7e-06
At1g16920.1 68414.m02051 Ras-related GTP-binding protein, putati... 47 7e-06
At1g02130.1 68414.m00139 Ras-related protein (ARA-5) / small GTP... 47 9e-06
At2g43130.1 68415.m05356 Ras-related protein (ARA-4) / small GTP... 46 2e-05
At4g17530.1 68417.m02622 Ras-related GTP-binding protein, putati... 46 2e-05
At5g47520.1 68418.m05867 Ras-related GTP-binding protein, putati... 45 3e-05
At1g05810.1 68414.m00608 Ras-related protein (ARA-1) (ARA) / sma... 45 3e-05
At5g47200.1 68418.m05820 Ras-related GTP-binding protein, putati... 45 4e-05
At5g03530.1 68418.m00309 Ras-related GTP-binding family protein ... 45 4e-05
At3g09910.1 68416.m01181 Ras-related GTP-binding protein, putati... 45 4e-05
At2g31680.1 68415.m03867 Ras-related GTP-binding protein, putati... 45 4e-05
At4g19640.1 68417.m02884 Ras-related GTP-binding protein, putati... 44 5e-05
At5g47960.1 68418.m05925 Ras-related GTP-binding family protein ... 44 8e-05
At5g10260.1 68418.m01191 Ras-related GTP-binding protein, putati... 44 8e-05
At1g28550.1 68414.m03513 Ras-related GTP-binding protein, putati... 44 8e-05
At5g64990.1 68418.m08174 Ras-related GTP-binding protein, putati... 43 1e-04
At3g15060.1 68416.m01905 Ras-related GTP-binding family protein ... 43 1e-04
At1g18200.1 68414.m02264 Ras-related GTP-binding family protein ... 43 1e-04
At1g73640.1 68414.m08525 Ras-related GTP-binding family protein ... 42 2e-04
At5g65270.1 68418.m08210 Ras-related GTP-binding family protein ... 42 3e-04
At1g09630.1 68414.m01080 Ras-related GTP-binding protein, putati... 42 3e-04
At5g60860.1 68418.m07634 Ras-related GTP-binding protein, putati... 42 3e-04
At3g12160.1 68416.m01516 Ras-related GTP-binding family protein ... 42 3e-04
At4g18430.1 68417.m02735 Ras-related GTP-binding protein, putati... 41 6e-04
At2g44610.1 68415.m05553 Ras-related GTP-binding protein, putati... 41 6e-04
At1g06400.1 68414.m00677 Ras-related GTP-binding protein (ARA-2)... 41 6e-04
At2g33870.1 68415.m04158 Ras-related GTP-binding protein, putati... 40 8e-04
At2g22290.1 68415.m02645 Ras-related GTP-binding protein, putati... 40 8e-04
At5g45750.1 68418.m05624 Ras-related GTP-binding protein, putati... 40 0.001
At4g18800.1 68417.m02776 Ras-related GTP-binding family protein ... 40 0.001
At4g39990.1 68417.m05663 Ras-related GTP-binding protein, putati... 38 0.003
At5g46025.1 68418.m05660 Ras-related GTP-binding family protein ... 38 0.004
At4g39890.1 68417.m05651 Ras-related GTP-binding family protein ... 38 0.004
At1g43890.1 68414.m05059 Ras-related GTP-binding protein, putati... 38 0.005
At1g01200.1 68414.m00034 Ras-related GTP-binding protein, putati... 37 0.007
At2g21880.1 68415.m02600 Ras-related GTP-binding protein, putati... 34 0.067
At2g44690.1 68415.m05562 Rac-like GTP-binding protein (ARAC9) id... 33 0.12
At4g08190.1 68417.m01354 Ras-related GTP-binding protein, putati... 33 0.16
At3g18820.1 68416.m02390 Ras-related GTP-binding protein, putati... 30 1.1
At1g52280.1 68414.m05899 Ras-related GTP-binding protein, putati... 29 1.4
At4g35020.1 68417.m04967 Rac-like GTP-binding protein (ARAC3) / ... 28 4.4
At1g22740.1 68414.m02841 Ras-related protein (RAB7) / AtRab75 / ... 28 4.4
At1g05805.1 68414.m00607 basic helix-loop-helix (bHLH) family pr... 28 4.4
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 27 5.8
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 27 5.8
At5g62880.1 68418.m07890 Rac-like GTP-binding protein (ARAC10) i... 27 7.7
>At4g35860.1 68417.m05093 Ras-related GTP-binding protein, putative
similar to Rab2-like GTP-binding protein GI:1765896 from
[Arabidopsis thaliana]
Length = 211
Score = 64.5 bits (150), Expect = 4e-11
Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Query: 8 LTVRFLTKRYIGEYDHQQDSKYKHEAL-LDGEPILFEILDTCPKSLNEIPGNEIAQWADG 66
L ++F KR+ +D ++ + +DG PI +I DT + + A G
Sbjct: 22 LLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAG 81
Query: 67 LFLVYSITDRESFNYVRR----AKQSLQPEIPLTLVGNKADMVHLRQVSPEEGEILAKD 121
LVY IT RE+FN++ A+Q P + + L+GNK D+ H R VS EEG+ AK+
Sbjct: 82 ALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNKCDLAHKRAVSKEEGQQFAKE 140
>At4g17170.1 68417.m02583 Rab2-like GTP-binding protein (RAB2)
identical to Rab2-like protein (At-RAB2) GI:1765896 from
[Arabidopsis thaliana]
Length = 211
Score = 61.3 bits (142), Expect = 4e-10
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 5/119 (4%)
Query: 8 LTVRFLTKRYIGEYDHQQDSKYKHEAL-LDGEPILFEILDTCPKSLNEIPGNEIAQWADG 66
L ++F KR+ +D ++ + +D +PI +I DT + + A G
Sbjct: 22 LLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAG 81
Query: 67 LFLVYSITDRESFNYVRR----AKQSLQPEIPLTLVGNKADMVHLRQVSPEEGEILAKD 121
LVY IT RE+FN++ A+Q + + L+GNK D+ H R VS EEGE AK+
Sbjct: 82 ALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKE 140
>At4g17160.1 68417.m02582 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:1208537 from [Glycine
max]
Length = 205
Score = 55.6 bits (128), Expect = 2e-08
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 8 LTVRFLTKRYIGEYDHQQDSKYKHEAL-LDGEPILFEILDTCPKSLNEIPGNEIAQWADG 66
L ++F KR+ +D ++ + + +D +PI +I DT + + G
Sbjct: 22 LLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIWDTAGQESFRSVTRSYYRGRAG 81
Query: 67 LFLVYSITDRESFNYV----RRAKQSLQPEIPLTLVGNKADMVHLRQVSPEEGEILAKD 121
LVY IT RE+FN++ A+Q + L+GNK D+ R VS EEGE A++
Sbjct: 82 TLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNKCDLEDKRTVSTEEGEQFARE 140
>At5g59150.1 68418.m07413 Ras-related GTP-binding protein, putative
similar to Ras-related protein Rab11C SP:Q40193 from
[Lotus japonicus]
Length = 217
Score = 52.0 bits (119), Expect = 2e-07
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFN----YVRRAKQSLQ 90
++G+ + +I DT + + + A G LVY IT R++F+ ++R +
Sbjct: 56 VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHAD 115
Query: 91 PEIPLTLVGNKADMVHLRQVSPEEGEILAKDFECSF 126
I + + GNKAD+ HLR V+ E+G+ LA+ SF
Sbjct: 116 SNIVIMMAGNKADLNHLRSVAEEDGQTLAETEGLSF 151
>At5g59840.1 68418.m07503 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 216
Score = 51.6 bits (118), Expect = 3e-07
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESF----NYVRRAKQSLQ 90
LDG+ I +I DT + + A G+ LVY +TD SF N++R +Q
Sbjct: 59 LDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS 118
Query: 91 PEIPLTLVGNKADMVHLRQVSPE-EGEILAKDFECSF 126
+ LVGNKADM ++ P+ +G+ LA ++ F
Sbjct: 119 DNVNKILVGNKADMDESKRAVPKSKGQALADEYGIKF 155
>At3g53610.2 68416.m05922 Ras-related GTP-binding protein, putative
similar to Ras-related protein ARA-3 SP:P28186 from
[Arabidopsis thaliana]
Length = 216
Score = 51.6 bits (118), Expect = 3e-07
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESF----NYVRRAKQSLQ 90
LDG+ I +I DT + + A G+ LVY +TD SF N++R +Q
Sbjct: 59 LDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS 118
Query: 91 PEIPLTLVGNKADMVHLRQVSPE-EGEILAKDFECSF 126
+ LVGNKADM ++ P+ +G+ LA ++ F
Sbjct: 119 DSVNKILVGNKADMDESKRAVPKSKGQALADEYGMKF 155
>At3g53610.1 68416.m05921 Ras-related GTP-binding protein, putative
similar to Ras-related protein ARA-3 SP:P28186 from
[Arabidopsis thaliana]
Length = 216
Score = 51.6 bits (118), Expect = 3e-07
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESF----NYVRRAKQSLQ 90
LDG+ I +I DT + + A G+ LVY +TD SF N++R +Q
Sbjct: 59 LDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS 118
Query: 91 PEIPLTLVGNKADMVHLRQVSPE-EGEILAKDFECSF 126
+ LVGNKADM ++ P+ +G+ LA ++ F
Sbjct: 119 DSVNKILVGNKADMDESKRAVPKSKGQALADEYGMKF 155
>At5g45130.1 68418.m05540 Ras-related protein (RHA1) / small
GTP-binding protein identical to Ras-related protein
RHA1 SP:P31582 from [Arabidopsis thaliana]
Length = 200
Score = 51.2 bits (117), Expect = 4e-07
Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Query: 6 TTLTVRFLTKRYIGEYDHQQDSKYKHEAL-LDGEPILFEILDTCPKSLNEIPGNEIAQWA 64
++L +RF+ +++ + + + + L ++ + FEI DT + + A
Sbjct: 24 SSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGA 83
Query: 65 DGLFLVYSITDRESFNYVRRAKQSLQ----PEIPLTLVGNKADMVHLRQVSPEEGEILAK 120
+V+ IT++ SF ++ Q LQ P + + L GNKAD++ R+VS EE EI A+
Sbjct: 84 AAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVSAEEAEIYAQ 143
Query: 121 DFECSFXXXXXXXXXXXXXXXFHELCREV 149
+ F F+E+ + +
Sbjct: 144 E-NSLFFMETSAKTATNVKDIFYEIAKRL 171
>At3g11730.1 68416.m01439 Ras-related GTP-binding protein, putative
similar to Rab1-like small GTP-binding protein
GI:4096662 from [Petunia x hybrida]
Length = 205
Score = 51.2 bits (117), Expect = 4e-07
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 5/124 (4%)
Query: 8 LTVRFLTKRYIGEYDHQQDSKYKHEAL-LDGEPILFEILDTCPKSLNEIPGNEIAQWADG 66
L +RF YI Y +K + DG+ I +I DT + + + A G
Sbjct: 24 LLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHG 83
Query: 67 LFLVYSITDRESFNYVRRAKQSL----QPEIPLTLVGNKADMVHLRQVSPEEGEILAKDF 122
+ +VY T+ ESFN V++ + + L+GNK DMV + VS E G LA +
Sbjct: 84 IIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDMVESKVVSTETGRALADEL 143
Query: 123 ECSF 126
F
Sbjct: 144 GIPF 147
>At3g46830.1 68416.m05083 Ras-related protein (RAB11A) / small
GTP-binding protein, putative identical to SP|Q96283
Ras-related protein Rab11A {Arabidopsis thaliana};
identical to cDNA Rab11 protein GI:2598228
Length = 217
Score = 50.8 bits (116), Expect = 5e-07
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFN----YVRRAKQSLQ 90
++G+ I +I DT + + + A G LVY IT R++F+ ++R +
Sbjct: 56 VEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHAD 115
Query: 91 PEIPLTLVGNKADMVHLRQVSPEEGEILAKDFECSF 126
I + + GNK+D+ HLR V+ E+G+ LA+ SF
Sbjct: 116 SNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEGLSF 151
>At3g46060.1 68416.m04984 Ras-related protein (ARA-3) / small
GTP-binding protein, putative identical to SP|P28186
Ras-related protein ARA-3 {Arabidopsis thaliana};
contains Pfam profile: PF00071 Ras family
Length = 216
Score = 50.8 bits (116), Expect = 5e-07
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESF----NYVRRAKQSLQ 90
LDG+ I +I DT + + A G+ LVY +TD SF N++R +Q
Sbjct: 59 LDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS 118
Query: 91 PEIPLTLVGNKADMVHLRQVSP-EEGEILAKDFECSF 126
+ LVGNKADM ++ P +G+ LA ++ F
Sbjct: 119 DNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKF 155
>At3g09900.1 68416.m01180 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:871510 from [Pisum
sativum]; contains Pfam profile: PF00071 Ras family
Length = 218
Score = 49.6 bits (113), Expect = 1e-06
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVR----RAKQSLQ 90
LDG+ I +I DT + + A G+ LVY +TD SFN +R +Q
Sbjct: 59 LDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHAS 118
Query: 91 PEIPLTLVGNKADMVHLRQVSP-EEGEILAKDFECSF 126
+ LVGNKADM ++ P +G+ LA ++ F
Sbjct: 119 DSVNKILVGNKADMDESKRAVPTSKGQALADEYGIKF 155
>At5g03520.1 68418.m00308 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:871508 from [Pisum
sativum]
Length = 216
Score = 49.2 bits (112), Expect = 2e-06
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVR----RAKQSLQ 90
LDG+ I +I DT + + A G+ LVY +TD SFN +R +Q
Sbjct: 59 LDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHAS 118
Query: 91 PEIPLTLVGNKADMVHLRQVSP-EEGEILAKDFECSF 126
+ LVGNKADM ++ P +G+ LA ++ F
Sbjct: 119 DNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKF 155
>At1g07410.1 68414.m00790 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB11C GI:1370146 from
[Lotus japonicus]
Length = 214
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFN----YVRRAKQSLQ 90
++G+ + +I DT + + + A G LVY IT R++F ++R +
Sbjct: 56 VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHAD 115
Query: 91 PEIPLTLVGNKADMVHLRQVSPEEGEILAKDFECSF 126
I + + GNK+D+ HLR V+ E+G LA+ SF
Sbjct: 116 SNIVIMMAGNKSDLNHLRSVADEDGRSLAEKEGLSF 151
>At3g54840.1 68416.m06076 Rab GTPase (ARA6) identical to small
GTPase Ara6 [Arabidopsis thaliana] GI:13160603
Length = 202
Score = 47.6 bits (108), Expect = 5e-06
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 33 ALLDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFN----YVRRAKQS 88
AL D + FEI DT + + A +VY IT ESF +V+ ++
Sbjct: 76 ALQDSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKH 135
Query: 89 LQPEIPLTLVGNKADMVHLRQVSPEEGEILAK 120
P+I + LVGNKAD+ R+V E+G LA+
Sbjct: 136 GSPDIVMALVGNKADLHEKREVPTEDGMELAE 167
>At3g07410.1 68416.m00883 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 217
Score = 47.2 bits (107), Expect = 7e-06
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRRAKQSLQPE-- 92
++G+ + +I DT + + + A G +VY IT ++F V+R Q L
Sbjct: 56 IEGKEVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCD 115
Query: 93 --IPLTLVGNKADMVHLRQVSPEEGEILAKDFECSFXXXXXXXXXXXXXXXFHELCREV 149
+ LVGNK D+ +R VS EEG+ LA++ E F F + RE+
Sbjct: 116 TAVAQMLVGNKCDLEDIRAVSVEEGKALAEE-EGLFFMETSALDATNVDKAFEIVIREI 173
>At1g16920.1 68414.m02051 Ras-related GTP-binding protein, putative
similar to GTP binding protein GI:218228 from [Vicia
faba]; identical to cDNA small GTP-binding protein
(Rab11) GI:451859
Length = 216
Score = 47.2 bits (107), Expect = 7e-06
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRR----AKQSLQ 90
+DG+ + +I DT + + + A G LVY +T R +F V R K
Sbjct: 57 VDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTD 116
Query: 91 PEIPLTLVGNKADMVHLRQVSPEEGEILAKDFECSF 126
P I + LVGNK+D+ HL V E+G+ A+ F
Sbjct: 117 PNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCF 152
>At1g02130.1 68414.m00139 Ras-related protein (ARA-5) / small
GTP-binding protein, putative identical to Ras-related
protein ARA-5 SP:P28188 from [Arabidopsis thaliana]
Length = 203
Score = 46.8 bits (106), Expect = 9e-06
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 5/124 (4%)
Query: 8 LTVRFLTKRYIGEYDHQQDSKYKHEAL-LDGEPILFEILDTCPKSLNEIPGNEIAQWADG 66
L +RF Y+ Y +K + DG+ I +I DT + + + A G
Sbjct: 24 LLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHG 83
Query: 67 LFLVYSITDRESFNYVRRAKQSL----QPEIPLTLVGNKADMVHLRQVSPEEGEILAKDF 122
+ +VY +TD ESFN V++ + + LVGNK+D+ R + E + A +
Sbjct: 84 IIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRAIPYETAKAFADEI 143
Query: 123 ECSF 126
F
Sbjct: 144 GIPF 147
>At2g43130.1 68415.m05356 Ras-related protein (ARA-4) / small
GTP-binding protein, putative identical to SP:P28187
Ras-related protein ARA-4 {Arabidopsis thaliana}
Length = 214
Score = 46.0 bits (104), Expect = 2e-05
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 5/120 (4%)
Query: 34 LLDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRRAKQSLQPEI 93
L+DG+ + +I DT + + + A G +VY IT +F V R L
Sbjct: 55 LIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHS 114
Query: 94 PLT----LVGNKADMVHLRQVSPEEGEILAKDFECSFXXXXXXXXXXXXXXXFHELCREV 149
T L+GNK D+ +R VS EEG+ LA+ E F F + RE+
Sbjct: 115 DTTVAKMLIGNKCDLESIRAVSVEEGKSLAES-EGLFFMETSALDSTNVKTAFEMVIREI 173
>At4g17530.1 68417.m02622 Ras-related GTP-binding protein, putative
very strong similarity to RAB1C [Lotus corniculatus var.
japonicus] GI:1370166; contains Pfam profile PF00071:
Ras family
Length = 202
Score = 45.6 bits (103), Expect = 2e-05
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 5/124 (4%)
Query: 8 LTVRFLTKRYIGEYDHQQDSKYKHEAL-LDGEPILFEILDTCPKSLNEIPGNEIAQWADG 66
L +RF Y+ Y +K + DG+ I +I DT + + + A G
Sbjct: 24 LLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHG 83
Query: 67 LFLVYSITDRESFNYVRRAKQSL----QPEIPLTLVGNKADMVHLRQVSPEEGEILAKDF 122
+ + Y +TD ESFN V++ + + LVGNK D+ + VS E + A +
Sbjct: 84 IIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTSQKVVSTETAKAFADEL 143
Query: 123 ECSF 126
F
Sbjct: 144 GIPF 147
>At5g47520.1 68418.m05867 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB11J GI:1370160 from
[Lotus japonicus]
Length = 221
Score = 45.2 bits (102), Expect = 3e-05
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRRAKQSLQPEIP 94
++G+ I +I DT + + + A G LVY I+ R++F+ + R L
Sbjct: 58 INGKEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSD 117
Query: 95 LT----LVGNKADMVHLRQVSPEEGEILAKDFECSFXXXXXXXXXXXXXXXFHELCREVL 150
+ LVGNK+D+ LR+VS EG+ LA + + F F + +E+
Sbjct: 118 MNVVTILVGNKSDLKDLREVSTAEGKALA-EAQGLFFMETSALDSSNVAAAFETVVKEIY 176
Query: 151 TLRRR 155
+ R
Sbjct: 177 NILSR 181
>At1g05810.1 68414.m00608 Ras-related protein (ARA-1) (ARA) / small
GTP-binding protein, putative nearly identical to
SP:P19892 Ras-related protein ARA-1 [Arabidopsis
thaliana] (Gene 76:313-319(1989))
Length = 261
Score = 45.2 bits (102), Expect = 3e-05
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRRAKQSLQPEIP 94
++G+ + +I DT + + + A G +VY IT R +F V R L+
Sbjct: 99 IEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSD 158
Query: 95 LT----LVGNKADMVHLRQVSPEEGEILAKD 121
T LVGNK D+ ++R VS EEG+ LA++
Sbjct: 159 TTVARMLVGNKCDLENIRAVSVEEGKALAEE 189
>At5g47200.1 68418.m05820 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303750 from [Pisum
sativum]
Length = 202
Score = 44.8 bits (101), Expect = 4e-05
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 5/124 (4%)
Query: 8 LTVRFLTKRYIGEYDHQQDSKYKHEAL-LDGEPILFEILDTCPKSLNEIPGNEIAQWADG 66
L +RF Y+ Y +K + DG+ I +I DT + + + A G
Sbjct: 24 LLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHG 83
Query: 67 LFLVYSITDRESFNYVRRAKQSL----QPEIPLTLVGNKADMVHLRQVSPEEGEILAKDF 122
+ + Y +TD ESFN V++ + + LVGNK D+ + VS E + A +
Sbjct: 84 IIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKNDLTSQKVVSTETAKAFADEL 143
Query: 123 ECSF 126
F
Sbjct: 144 GIPF 147
>At5g03530.1 68418.m00309 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 210
Score = 44.8 bits (101), Expect = 4e-05
Identities = 38/107 (35%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 26 DSKYKHEALLDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESF-NYVRR 84
D K K + + G+ + I DT + + + A G+ LVY +T RE+F N V
Sbjct: 48 DFKIK-QLTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDV 106
Query: 85 -AKQ----SLQPEIPLTLVGNKADMVHLRQVSPEEGEILAKDFECSF 126
K+ S E LVGNK D R VS EEG LAK+ C F
Sbjct: 107 WGKEIELYSTNQECVRMLVGNKVDRESERGVSREEGIALAKELNCMF 153
>At3g09910.1 68416.m01181 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:2723477 from
[Arabidopsis thaliana] ;contains Pfam profile: PF00071
Ras family
Length = 205
Score = 44.8 bits (101), Expect = 4e-05
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 37 GEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRR--AKQ----SLQ 90
G+ + I DT + + + + G+ LVY +T RE+F + AK+ S
Sbjct: 58 GKRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTN 117
Query: 91 PEIPLTLVGNKADMVHLRQVSPEEGEILAKDFECSF 126
+ LVGNK D R+VS EEG LAKD C F
Sbjct: 118 HDCIKMLVGNKVDRESERKVSREEGMALAKDLNCLF 153
>At2g31680.1 68415.m03867 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:289370 from [Brassica
napus]
Length = 219
Score = 44.8 bits (101), Expect = 4e-05
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRRAKQSLQPEIP 94
++G+ + +I DT + + + A G +VY I+ R +F V R L+
Sbjct: 56 IEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSD 115
Query: 95 LT----LVGNKADMVHLRQVSPEEGEILAKDFECSFXXXXXXXXXXXXXXXFHELCREVL 150
T LVGNK D+ +R VS EEG+ LA + E F F + R++
Sbjct: 116 TTVARMLVGNKCDLESIRAVSVEEGKALA-ETEGLFFMETSALDSTNVKTAFEMVIRDIY 174
Query: 151 T 151
T
Sbjct: 175 T 175
>At4g19640.1 68417.m02884 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB5A GI:1370178 from
[Lotus japonicus]
Length = 200
Score = 44.4 bits (100), Expect = 5e-05
Identities = 31/149 (20%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 6 TTLTVRFLTKRYIGEYDHQQDSKYKHEAL-LDGEPILFEILDTCPKSLNEIPGNEIAQWA 64
++L +RF+ +++ + + + + L ++ + FEI DT + + A
Sbjct: 24 SSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGA 83
Query: 65 DGLFLVYSITDRESFNYVRRAKQSLQ----PEIPLTLVGNKADMVHLRQVSPEEGEILAK 120
+V+ +T++ SF ++ Q LQ P + + L GNK+D++ R+V+ E+ + A+
Sbjct: 84 AAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTYAQ 143
Query: 121 DFECSFXXXXXXXXXXXXXXXFHELCREV 149
+ F F+E+ R +
Sbjct: 144 E-NGLFFMETSAKTATNVKEIFYEIARRL 171
>At5g47960.1 68418.m05925 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 223
Score = 43.6 bits (98), Expect = 8e-05
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRRAKQSLQ---- 90
+D + I +I DT + + + A G LVY IT R+SF++V R + L+
Sbjct: 59 IDRKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHAD 118
Query: 91 PEIPLTLVGNKADMVHLRQVSPEEGEILAK 120
I + L+GNK D+ LR V E+ + A+
Sbjct: 119 KNIVIMLIGNKTDLGTLRAVPTEDAKEFAQ 148
>At5g10260.1 68418.m01191 Ras-related GTP-binding protein, putative
similar to Ras-related protein Rab-6A SP:P20340 from
[Homo sapiens]
Length = 178
Score = 43.6 bits (98), Expect = 8e-05
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 69 LVYSITDRESF----NYVRRAKQSLQPEIPLTLVGNKADMVHLRQVSPEEGEILAKDFEC 124
+VY + +R+SF ++ + ++ + LVGNK D+V RQVS EEG+ A+D+
Sbjct: 58 IVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLVGNKTDLVDKRQVSIEEGDNKARDYGV 117
Query: 125 SF 126
F
Sbjct: 118 IF 119
>At1g28550.1 68414.m03513 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from (Pisum
sativum)
Length = 218
Score = 43.6 bits (98), Expect = 8e-05
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 36 DGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRRAKQSLQPE--- 92
D + + +I DT + + + A G LVY +T +F V R + L+
Sbjct: 58 DDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDA 117
Query: 93 -IPLTLVGNKADMVHLRQVSPEEGEILAK 120
I + LVGNKAD+ HLR +S EE + A+
Sbjct: 118 NIVIMLVGNKADLRHLRAISTEEAKAFAE 146
>At5g64990.1 68418.m08174 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:550072 from [Homo
sapiens]
Length = 206
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 69 LVYSITDRESF----NYVRRAKQSLQPEIPLTLVGNKADMVHLRQVSPEEGEILAKDFEC 124
+VY + ++SF ++ + + + LVGNK D+V+ RQVS EEGE A++F
Sbjct: 85 IVYDVASKQSFINTSKWIEEVRAERGSYVIIVLVGNKTDLVNKRQVSIEEGENKAREFGA 144
Query: 125 SF 126
F
Sbjct: 145 LF 146
>At3g15060.1 68416.m01905 Ras-related GTP-binding family protein
similar to GTP-binding protein GI:303742 from [Pisum
sativum]; contains Pfam profile: PF00071 ras family
Length = 217
Score = 43.2 bits (97), Expect = 1e-04
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRRAKQSL----Q 90
+D + + +I DT + + + A G LVY +T +F V R + L +
Sbjct: 57 VDEKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTE 116
Query: 91 PEIPLTLVGNKADMVHLRQVSPEEGEILAK 120
I + LVGNKAD+ HLR VS E+ + A+
Sbjct: 117 ANIVIMLVGNKADLRHLRAVSTEDAKAFAE 146
>At1g18200.1 68414.m02264 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 354
Score = 43.2 bits (97), Expect = 1e-04
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 26 DSKYKHEALLDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRRA 85
D Y++ + D + I +I DT + + + A G L+Y IT R +F + +
Sbjct: 49 DFAYRNVRVGD-KTIKAQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKW 107
Query: 86 KQSLQ----PEIPLTLVGNKADMVHLRQVSPEEGEILAK 120
L+ PE + LVGNK+D+ R+V EEG+ LA+
Sbjct: 108 LSELRGFSSPETVVVLVGNKSDLGQSREVEEEEGKTLAE 146
>At1g73640.1 68414.m08525 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 ras family Pfam profile:
PF00071 Ras family
Length = 233
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 66 GLFLVYSITDRESFNYVRR----AKQSLQPEIPLTLVGNKADMVHLRQVSPEEGEILAK 120
G L+Y IT R +F+ +++ + PE + LVGNK+D+ R+V +EG+ LA+
Sbjct: 88 GALLIYDITRRTTFDNIKKWLFELRDFANPETVVVLVGNKSDLRQSREVEEDEGKTLAE 146
>At5g65270.1 68418.m08210 Ras-related GTP-binding family protein
similar to GTP-binding protein RAB11A GI:1370142 from
[Lotus japonicus]; contains Pfam profile: PF00071 Ras
family
Length = 226
Score = 41.9 bits (94), Expect = 3e-04
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 34 LLDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRRAKQSLQ--- 90
++D + + +I DT + + + A G LVY IT R++F+++ R + L+
Sbjct: 60 VIDHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHA 119
Query: 91 -PEIPLTLVGNKADMVHLRQVSPEEGEILAK 120
I + L+GNK+D+V R + E+ + A+
Sbjct: 120 DKNIVIILIGNKSDLVDQRAIPTEDAKEFAE 150
>At1g09630.1 68414.m01080 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:1370146 from [Lotus
japonicus]
Length = 217
Score = 41.9 bits (94), Expect = 3e-04
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRRAKQSLQPE-- 92
++G + +I DT + + + A G LVY +T +F V R + L+
Sbjct: 56 VEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHAD 115
Query: 93 --IPLTLVGNKADMVHLRQVSPEEGEILAKDFECSF 126
I + L+GNK D+ HLR V+ E+ + A+ SF
Sbjct: 116 SNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSF 151
>At5g60860.1 68418.m07634 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 217
Score = 41.5 bits (93), Expect = 3e-04
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRRAKQSLQPE-- 92
+D + + +I DT + + + A G LVY +T +F V R + L+
Sbjct: 57 VDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD 116
Query: 93 --IPLTLVGNKADMVHLRQVSPEEGEILAK 120
I + VGNKAD+ HLR VS E+ + A+
Sbjct: 117 ANIVIMFVGNKADLRHLRAVSTEDAKAFAE 146
>At3g12160.1 68416.m01516 Ras-related GTP-binding family protein
similar to ras-related GTP-binding protein RGP1
SP:P25766 from [Oryza sativa];contains Pfam profile:
PF00071 Ras family
Length = 222
Score = 41.5 bits (93), Expect = 3e-04
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 34 LLDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRRAKQSLQ--- 90
++D + + +I DT + + + A G LVY +T R+SF+++ + + L+
Sbjct: 58 VIDNKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHA 117
Query: 91 -PEIPLTLVGNKADMVHLRQVSPEEGEILAK 120
I + L+GNK D+ LR V E+ + A+
Sbjct: 118 DKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQ 148
>At4g18430.1 68417.m02735 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 217
Score = 40.7 bits (91), Expect = 6e-04
Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 4/134 (2%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRRAKQSLQPE-- 92
+D + I ++ DT + + + A G LVY IT +F V R + L+
Sbjct: 57 VDEKIIKAQLWDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTD 116
Query: 93 --IPLTLVGNKADMVHLRQVSPEEGEILAKDFECSFXXXXXXXXXXXXXXXFHELCREVL 150
+ + LVGNKAD+ HLR V EE ++ F H L +
Sbjct: 117 ANVVIMLVGNKADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYR 176
Query: 151 TLRRRAKHSLLDRM 164
+ R+A D M
Sbjct: 177 VMSRKALDGTGDPM 190
>At2g44610.1 68415.m05553 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:623586 from [Nicotiana
tabacum] ; contains an ADP-ribosylation factors family
signature for proteins involved in protein trafficking
Length = 208
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 69 LVYSITDRESF----NYVRRAKQSLQPEIPLTLVGNKADMVHLRQVSPEEGEILAKDFEC 124
+VY + R+SF ++ + ++ + LVGNK D+V RQVS EE E A++
Sbjct: 87 IVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLVGNKTDLVDKRQVSIEEAEAKARELNV 146
Query: 125 SF 126
F
Sbjct: 147 MF 148
>At1g06400.1 68414.m00677 Ras-related GTP-binding protein (ARA-2)
identical to Ras-related protein ARA-2 SP:P28185 from
[Arabidopsis thaliana]
Length = 216
Score = 40.7 bits (91), Expect = 6e-04
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFN----YVRRAKQSLQ 90
++G+ + +I DT + + + A G L+Y +T +F ++R +
Sbjct: 57 VEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTD 116
Query: 91 PEIPLTLVGNKADMVHLRQVSPEEGEILAK 120
P I + L+GNK D+ HL V EE + A+
Sbjct: 117 PNIVVMLIGNKCDLRHLVAVKTEEAKAFAE 146
>At2g33870.1 68415.m04158 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 219
Score = 40.3 bits (90), Expect = 8e-04
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRRAKQSLQPEIP 94
+D + + +I DT + + + A G LVY +T +F V R + L+
Sbjct: 58 VDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD 117
Query: 95 ----LTLVGNKADMVHLRQVSPEE 114
+ LVGNKAD+ HLR +S EE
Sbjct: 118 ANTVIMLVGNKADLNHLRAISTEE 141
>At2g22290.1 68415.m02645 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:550072 from [Homo
sapiens]
Length = 207
Score = 40.3 bits (90), Expect = 8e-04
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 69 LVYSITDRESF----NYVRRAKQSLQPEIPLTLVGNKADMVHLRQVSPEEGEILAKDFEC 124
+VY + +R SF ++ + ++ + LVGNK D+V RQVS EEG+ +++
Sbjct: 87 VVYDVANRLSFLNTSKWIEEVRNERAGDVIIVLVGNKTDLVEKRQVSIEEGDSKGREYGV 146
Query: 125 SF 126
F
Sbjct: 147 MF 148
>At5g45750.1 68418.m05624 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303744 from [Pisum
sativum]
Length = 216
Score = 39.5 bits (88), Expect = 0.001
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFN----YVRRAKQSLQ 90
+D + I +I DT + + + A G LVY +T +F +++ +
Sbjct: 57 VDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTD 116
Query: 91 PEIPLTLVGNKADMVHLRQVSPEEGEILAK 120
P I + LVGNK+D+ HL V E+ + A+
Sbjct: 117 PNIVVMLVGNKSDLRHLVAVQTEDAKSFAE 146
>At4g18800.1 68417.m02776 Ras-related GTP-binding family protein
similar to ras-related GTP binding protein RIC2
SP:P40393 from [Oryza sativa]; contains Pfam profile:
PF00071 Ras family
Length = 214
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 64 ADGLFLVYSITDRESFNYVRRAKQSLQ----PEIPLTLVGNKADMVHLRQVSPEEGEILA 119
A G LVY +T +F V R + L+ P I + LVGNK+D+ HL V E+ + A
Sbjct: 86 AVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFA 145
Query: 120 KD 121
++
Sbjct: 146 EN 147
>At4g39990.1 68417.m05663 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303738 from [Pisum
sativum]
Length = 224
Score = 38.3 bits (85), Expect = 0.003
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRRAKQSLQ---- 90
++ + I +I DT + + + A G LVY +T RE+F ++ R + L+
Sbjct: 61 IEQKSIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHAD 120
Query: 91 PEIPLTLVGNKADMVHLRQVSPEEGEILAK 120
I + L+GNK+D+ R V E+ + A+
Sbjct: 121 KNIVIILIGNKSDLEDQRAVPTEDAKEFAE 150
>At5g46025.1 68418.m05660 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 113
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 64 ADGLFLVYSITDRESFNYVRRAKQSLQ-----PEIPLTLVGNKADMVHLRQVSPEEGEIL 118
A G +VY IT +F V + + L+ ++ + LVGNK+D+ H R+VS EE +
Sbjct: 17 AMGALIVYDITSHTTFKNVEQWLKELRGFFDTDKLMIMLVGNKSDLDHRREVSMEEAKSF 76
Query: 119 AK 120
A+
Sbjct: 77 AE 78
>At4g39890.1 68417.m05651 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 214
Score = 37.9 bits (84), Expect = 0.004
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 69 LVYSITDRESFNYVRRAKQSL-----QPEIPLTLVGNKADMVHLRQVSPEEGEILAKDFE 123
+VY +++R++F + + + Q + + LVGNK D+V RQVS EGE K++
Sbjct: 87 VVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVEKRQVSISEGEDKGKEYG 146
Query: 124 CSF 126
F
Sbjct: 147 VMF 149
>At1g43890.1 68414.m05059 Ras-related GTP-binding protein, putative
similar to GTP-binding protein(RAB1Y) GI:1370173 from
(Lotus japonicus)
Length = 212
Score = 37.5 bits (83), Expect = 0.005
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 29 YKHEALLDGEPIL-FEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRR--A 85
+K + L GE L I DT + + + A G+ +VY +T R++F + A
Sbjct: 49 FKVKYLTIGEKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWA 108
Query: 86 KQ----SLQPEIPLTLVGNKADMVHLRQVSPEEGEILAKDFECSF 126
K+ S + LVGNK D R VS +EG A+++ C F
Sbjct: 109 KEIDLYSTNQDCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLF 153
>At1g01200.1 68414.m00034 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GB:D12541 GI:303736 from
[Pisum sativum]
Length = 237
Score = 37.1 bits (82), Expect = 0.007
Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Query: 35 LDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRRAKQSLQPEIP 94
L G+ + +I DT + + + A G +VY IT R SF++V R + L+
Sbjct: 72 LRGKLVKAQIWDTAGQERYRAVTSAYYRGALGAMVVYDITKRLSFDHVARWVEELRAHAD 131
Query: 95 ----LTLVGNKADMVHLRQVSPEEGEILAKDFECSFXXXXXXXXXXXXXXXFHELCREVL 150
+ LVGNKAD+ ++ P E + + + F F L E+
Sbjct: 132 DSAVIMLVGNKADLSVGKRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIF 191
Query: 151 T 151
+
Sbjct: 192 S 192
>At2g21880.1 68415.m02600 Ras-related GTP-binding protein, putative
similar to Ras family GTP-binding protein SP:Q43463 from
[Glycine max]
Length = 212
Score = 33.9 bits (74), Expect = 0.067
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 6 TTLTVRFLTKRYIGEYDHQQDSKYKHEAL-LDGEPILFEILDTCPKSLNEIPGNEIAQWA 64
T+L +++ K++ +Y + + + L +D + + +I DT + + G + A
Sbjct: 23 TSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQIWDTAGQERFQSLGAAFYRGA 82
Query: 65 DGLFLVYSITDRESFN-----YVRRAKQS--LQPE-IPLTLVGNKADM 104
D LVY + + +SF + KQ+ ++PE P L+GNK D+
Sbjct: 83 DCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEPETFPFVLIGNKTDV 130
>At2g44690.1 68415.m05562 Rac-like GTP-binding protein (ARAC9)
identical to rac-like protein ARAC9 GI:5381419 from
[Arabidopsis thaliana]
Length = 209
Score = 33.1 bits (72), Expect = 0.12
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Query: 6 TTLTVRFLTKRYIGEYDHQQDSKYKHEALLDGEPILFEILDTC-PKSLNEIPGNEIAQWA 64
T L + + + + +Y + L+DG+ + + DT + N + + A
Sbjct: 32 TCLLISYTSNTFPTDYVPTVFDNFNANVLVDGKTVNLGLWDTAGQEDYNRVRPLSY-RGA 90
Query: 65 DGLFLVYSITDRESF-NYVRRAKQSLQ---PEIPLTLVGNKADM 104
D L +S+ R SF N ++ L+ P +P+ LVG K+D+
Sbjct: 91 DVFILAFSLISRPSFENIAKKWVPELRHYAPTVPIVLVGTKSDL 134
>At4g08190.1 68417.m01354 Ras-related GTP-binding protein, putative
similar to Ras-related protein Rab11A
(Swiss-Prot:Q96283) [Arabidopsis thaliana]
Length = 127
Score = 32.7 bits (71), Expect = 0.16
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 81 YVRRAKQSLQPEIPLTLVGNKADMVHLRQVSPEEG 115
++R + I + + GNKAD+ HLR V+ E+G
Sbjct: 70 WLRELRDHADSNIVIMMAGNKADLNHLRSVAEEDG 104
>At3g18820.1 68416.m02390 Ras-related GTP-binding protein, putative
similar to Ras-related protein RAB7 GI:1370186 from
[Pisum sativum], Plant Mol. Biol. 21 (6), 1195-1199
(1993); contains Pfam profile: PF00071 Ras family
Length = 206
Score = 29.9 bits (64), Expect = 1.1
Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 9/108 (8%)
Query: 6 TTLTVRFLTKRYIGEYDHQQDSKY-KHEALLDGEPILFEILDTCPKSLNEIPGNEIAQWA 64
T+L +++ K++ +Y + + E + +I DT + + G + A
Sbjct: 22 TSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGA 81
Query: 65 DGLFLVYSITDRESFNYVRRAKQSL-------QPE-IPLTLVGNKADM 104
D LVY + +SF + ++ PE P L+GNK D+
Sbjct: 82 DCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPFVLIGNKVDV 129
>At1g52280.1 68414.m05899 Ras-related GTP-binding protein, putative
similar to RAB7D GI:1370187 from [Lotus japonicus]
(Plant J. 11 (2), 237-250 (1997)); contains Pfam
PF00071: Ras family
Length = 206
Score = 29.5 bits (63), Expect = 1.4
Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 9/108 (8%)
Query: 6 TTLTVRFLTKRYIGEYDHQQDSKY-KHEALLDGEPILFEILDTCPKSLNEIPGNEIAQWA 64
T+L +F+ +++ +Y + + E +D +I DT + + G + A
Sbjct: 22 TSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQIWDTAGQERFQSLGVAFYRGA 81
Query: 65 DGLFLVYSITDRESFN--------YVRRAKQSLQPEIPLTLVGNKADM 104
D LVY + +SF+ ++ +A S P ++GNK D+
Sbjct: 82 DCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDV 129
>At4g35020.1 68417.m04967 Rac-like GTP-binding protein (ARAC3) /
Rho-like GTP-binding protein (ROP6) identical to
SP|Q38912 RAC-like GTP binding protein ARAC3
(GTP-binding protein ROP6) {Arabidopsis thaliana};
identical to cDNA Rho-like GTP binding protein (Rop6)
GI:2645642
Length = 198
Score = 27.9 bits (59), Expect = 4.4
Identities = 22/104 (21%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
Query: 6 TTLTVRFLTKRYIGEYDHQQDSKYKHEALLDGEPILFEILDTC-PKSLNEIPGNEIAQWA 64
T L + + + + +Y + ++DG I + DT + N + + A
Sbjct: 20 TCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWDTAGQEDYNRLRPLSY-RGA 78
Query: 65 DGLFLVYSITDRESFNYVRRA----KQSLQPEIPLTLVGNKADM 104
D L +S+ + S+ V + + P +P+ LVG K D+
Sbjct: 79 DVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKLDL 122
>At1g22740.1 68414.m02841 Ras-related protein (RAB7) / AtRab75 /
small GTP-binding protein, putative identical to
SP:O04157 Ras-related protein Rab7 (AtRab75)
[Arabidopsis thaliana]
Length = 203
Score = 27.9 bits (59), Expect = 4.4
Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 6 TTLTVRFLTKRYIGEYDHQQDSKYKHEAL-LDGEPILFEILDTCPKSLNEIPGNEIAQWA 64
T+L +++ ++ +Y + + + L +D + +I DT + + G + A
Sbjct: 22 TSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGA 81
Query: 65 DGLFLVYSITDRESF--------NYVRRAKQSLQPEIPLTLVGNKADM 104
D LVY + +SF ++ RA P L+GNK D+
Sbjct: 82 DCCVLVYDVNHLKSFESLDNWHNEFLTRASPRDPMAFPFILLGNKVDI 129
>At1g05805.1 68414.m00607 basic helix-loop-helix (bHLH) family
protein
Length = 362
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/59 (23%), Positives = 22/59 (37%)
Query: 56 PGNEIAQWADGLFLVYSITDRESFNYVRRAKQSLQPEIPLTLVGNKADMVHLRQVSPEE 114
P GLF YS+ S NY+ Q + +P + + H R ++ E
Sbjct: 242 PSKRSKDMDSGLFSQYSLPSDTSMNYMDNFMQLPEDSVPCKIRAKRGCATHPRSIAERE 300
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 64 ADGLFLVYSITDRESFNYVRRAKQSLQPEIPLTLVGNKAD 103
ADG L+ + N R + ++Q +P+ +V NK D
Sbjct: 233 ADGAVLIVDAAEGVMVNTERAIRHAIQDHLPIVVVINKVD 272
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 64 ADGLFLVYSITDRESFNYVRRAKQSLQPEIPLTLVGNKAD 103
ADG L+ + N R + ++Q +P+ +V NK D
Sbjct: 233 ADGAVLIVDAAEGVMVNTERAIRHAIQDHLPIVVVINKVD 272
>At5g62880.1 68418.m07890 Rac-like GTP-binding protein (ARAC10)
identical to rac GTP binding protein Arac10 [Arabidopsis
thaliana] GI:3702964, rac-like GTP binding protein
Arac10 [Arabidopsis thaliana] GI:7211193; contains Pfam
profile: PF00071 Ras family
Length = 215
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 64 ADGLFLVYSITDRESFNYVRRA----KQSLQPEIPLTLVGNKADM 104
AD L +S+ R S+ V + Q P +PL LVG K D+
Sbjct: 80 ADVFVLSFSLVSRASYENVFKKWIPELQHFAPGVPLVLVGTKLDL 124
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.321 0.137 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,091,201
Number of Sequences: 28952
Number of extensions: 151908
Number of successful extensions: 402
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 312
Number of HSP's gapped (non-prelim): 61
length of query: 186
length of database: 12,070,560
effective HSP length: 77
effective length of query: 109
effective length of database: 9,841,256
effective search space: 1072696904
effective search space used: 1072696904
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)
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