GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001998-TA|BGIBMGA001998-PA|IPR009637|Lung seven
transmembrane receptor
         (380 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    25   0.90 
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   6.3  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   6.3  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   8.4  

>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 25.0 bits (52), Expect = 0.90
 Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 8/85 (9%)

Query: 165 ITHLLKGAVLFVTIVLVGTGWNFIKHILSDRDKKLFMIV-IPLQAEIILA-------ESE 216
           I H LK  +  +TIV++      I H  S++  + F +  + +Q  I ++       E++
Sbjct: 6   INHSLKKRLKIITIVILVVATGNIIHTTSNKQLQFFAVEHLLIQCYIAVSIFGSSSFEAD 65

Query: 217 EGAVEHNAWRDIFIVVELVCCVAIV 241
                  A+  IF V++   C AI+
Sbjct: 66  LRQFYKTAYSAIFTVIDFSLCKAIL 90


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)

Query: 273 HFYVMVACYIYFTRIVVF 290
           H Y MVA Y+ F+ +  F
Sbjct: 27  HSYFMVAFYVVFSSVSTF 44


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)

Query: 273 HFYVMVACYIYFTRIVVF 290
           H Y MVA Y+ F+ +  F
Sbjct: 27  HSYFMVAFYVVFSSVSTF 44


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 8/36 (22%), Positives = 18/36 (50%)

Query: 57  NNCPYKGEGNPTPVNAIIEIFESNEGNYLSAGEIPL 92
           N+  +     PTP + + E++ S    + ++  +PL
Sbjct: 303 NDDAFNSVATPTPTSVMTELYPSPVPGHSTSPNLPL 338


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.328    0.143    0.442 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,621
Number of Sequences: 317
Number of extensions: 4307
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 4
length of query: 380
length of database: 114,650
effective HSP length: 58
effective length of query: 322
effective length of database: 96,264
effective search space: 30997008
effective search space used: 30997008
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 44 (21.8 bits)