GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001998-TA|BGIBMGA001998-PA|IPR009637|Lung seven
transmembrane receptor
         (380 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY193730-1|AAO62003.1|  441|Anopheles gambiae cytochrome P450 CY...    26   2.0  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   8.0  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   8.0  

>AY193730-1|AAO62003.1|  441|Anopheles gambiae cytochrome P450
           CYPm3r10 protein.
          Length = 441

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)

Query: 316 FLMTGYKFRPAAANPYFTPTHFDDVKPEVLSDIG 349
           +L+TG++F P+A      P  F D+K  +LS  G
Sbjct: 400 YLLTGFRFTPSAKT--IVPMEF-DIKSFILSPAG 430


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 23.8 bits (49), Expect = 8.0
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 103 FLFCAILWTYILKTSRQTVFRI 124
           FLF A L +++L T +  +FR+
Sbjct: 301 FLFVAYLLSFLLSTPQWMIFRV 322


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 23.8 bits (49), Expect = 8.0
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 103 FLFCAILWTYILKTSRQTVFRI 124
           FLF A L +++L T +  +FR+
Sbjct: 302 FLFVAYLLSFLLSTPQWMIFRV 323


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.328    0.143    0.442 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 396,359
Number of Sequences: 2123
Number of extensions: 16485
Number of successful extensions: 84
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 82
Number of HSP's gapped (non-prelim): 3
length of query: 380
length of database: 516,269
effective HSP length: 65
effective length of query: 315
effective length of database: 378,274
effective search space: 119156310
effective search space used: 119156310
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 49 (23.8 bits)