GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001998-TA|BGIBMGA001998-PA|IPR009637|Lung seven
transmembrane receptor
         (380 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113517-1|AAM29522.1|  738|Drosophila melanogaster RE59932p pro...   419   e-117
AE014298-1309|AAF46469.1|  738|Drosophila melanogaster CG12121-P...   419   e-117
AE014297-4313|AAF56852.1|  852|Drosophila melanogaster CG1401-PA...    32   1.5  
BT024427-1|ABC86489.1|  361|Drosophila melanogaster IP02593p pro...    30   4.6  
AJ271415-1|CAB69054.1|  361|Drosophila melanogaster fatty acid d...    30   4.6  
AE014297-1525|AAF54817.2|  361|Drosophila melanogaster CG5925-PA...    30   4.6  
AB055101-1|BAB21540.1|  361|Drosophila melanogaster fatty acid d...    30   4.6  
AB055100-1|BAB21539.1|  361|Drosophila melanogaster fatty acid d...    30   4.6  
AB055099-1|BAB21538.1|  361|Drosophila melanogaster fatty acid d...    30   4.6  
AB055098-1|BAB21537.1|  361|Drosophila melanogaster fatty acid d...    30   4.6  

>AY113517-1|AAM29522.1|  738|Drosophila melanogaster RE59932p
           protein.
          Length = 738

 Score =  419 bits (1032), Expect = e-117
 Identities = 194/326 (59%), Positives = 246/326 (75%), Gaps = 9/326 (2%)

Query: 39  FALYITSKKEEGLYNLYFNNCPYKGEGNPTPVNAIIEIFESNEGNYLSAGEIPLPLLYAV 98
           F++ + +  +EGLYNLYF+ CP          N  IE  E+N GNYLSAGE+PLP LY +
Sbjct: 377 FSMMVATPSDEGLYNLYFHACPNYHTSKIMSFNVDIE--ENNNGNYLSAGEMPLPALYFM 434

Query: 99  TSSIFLFCAILWTYILKTSRQTVFRIHIIMCILVYLKAASLAFHGINYHFIQIRGEHVTA 158
            S +F    + W +ILK S+ TV++IH +M +LV+LK+ SL FH INYHFI+ RGEHV  
Sbjct: 435 MSLLFFLSGLFWVFILKKSKHTVYKIHYLMAVLVFLKSLSLMFHSINYHFIEKRGEHVET 494

Query: 159 WAILYYITHLLKGAVLFVTIVLVGTGWNFIKHILSDRDKKLFMIVIPLQ-----AEIILA 213
           WAILYYI HLLKGAVLF+TIVL+GTGW FIKHILSD+DKK+FMIVIPLQ     A+II  
Sbjct: 495 WAILYYIAHLLKGAVLFITIVLIGTGWTFIKHILSDKDKKIFMIVIPLQVLANVAQIITD 554

Query: 214 ESEEGAVEHNAWRDIFIVVELVCCVAIVFPVVWSIRHLQDASTTDGKAAINLRKLKLFQH 273
           ES++   E   W +IF  V+L+CC AI+FP+VWSIRHL +AS TDGKAAINLRKLKLF+ 
Sbjct: 555 ESDQSDAEFRTWHNIFFFVDLLCCGAILFPIVWSIRHLHEASATDGKAAINLRKLKLFRQ 614

Query: 274 FYVMVACYIYFTRIVVFILKKTVRFQYSWMDEMFRELATLVFFLMTGYKFRPAAANPYFT 333
           FY+M+ CYIYFTRI+V +L+ TV FQY+W+DEMFRE+AT VFF++TGYKFRP +++PYFT
Sbjct: 615 FYIMIVCYIYFTRIIVDLLQMTVVFQYAWLDEMFREMATYVFFVLTGYKFRPVSSHPYFT 674

Query: 334 --PTHFDDVKPEVLSDIGILEGVTRI 357
                 DD + EVL++ G+ E V R+
Sbjct: 675 VPDEDEDDDEVEVLTESGLTETVHRV 700



 Score = 29.5 bits (63), Expect = 8.0
 Identities = 11/24 (45%), Positives = 18/24 (75%)

Query: 3  DDQRKYVDITTFGFLERGILEVNL 26
          +D+R+Y+ ++TFGF   G L+V L
Sbjct: 38 NDRRQYIALSTFGFYTNGHLDVQL 61


>AE014298-1309|AAF46469.1|  738|Drosophila melanogaster CG12121-PA
           protein.
          Length = 738

 Score =  419 bits (1032), Expect = e-117
 Identities = 194/326 (59%), Positives = 246/326 (75%), Gaps = 9/326 (2%)

Query: 39  FALYITSKKEEGLYNLYFNNCPYKGEGNPTPVNAIIEIFESNEGNYLSAGEIPLPLLYAV 98
           F++ + +  +EGLYNLYF+ CP          N  IE  E+N GNYLSAGE+PLP LY +
Sbjct: 377 FSMMVATPSDEGLYNLYFHACPNYHTSKIMSFNVDIE--ENNNGNYLSAGEMPLPALYFM 434

Query: 99  TSSIFLFCAILWTYILKTSRQTVFRIHIIMCILVYLKAASLAFHGINYHFIQIRGEHVTA 158
            S +F    + W +ILK S+ TV++IH +M +LV+LK+ SL FH INYHFI+ RGEHV  
Sbjct: 435 MSLLFFLSGLFWVFILKKSKHTVYKIHYLMAVLVFLKSLSLMFHSINYHFIEKRGEHVET 494

Query: 159 WAILYYITHLLKGAVLFVTIVLVGTGWNFIKHILSDRDKKLFMIVIPLQ-----AEIILA 213
           WAILYYI HLLKGAVLF+TIVL+GTGW FIKHILSD+DKK+FMIVIPLQ     A+II  
Sbjct: 495 WAILYYIAHLLKGAVLFITIVLIGTGWTFIKHILSDKDKKIFMIVIPLQVLANVAQIITD 554

Query: 214 ESEEGAVEHNAWRDIFIVVELVCCVAIVFPVVWSIRHLQDASTTDGKAAINLRKLKLFQH 273
           ES++   E   W +IF  V+L+CC AI+FP+VWSIRHL +AS TDGKAAINLRKLKLF+ 
Sbjct: 555 ESDQSDAEFRTWHNIFFFVDLLCCGAILFPIVWSIRHLHEASATDGKAAINLRKLKLFRQ 614

Query: 274 FYVMVACYIYFTRIVVFILKKTVRFQYSWMDEMFRELATLVFFLMTGYKFRPAAANPYFT 333
           FY+M+ CYIYFTRI+V +L+ TV FQY+W+DEMFRE+AT VFF++TGYKFRP +++PYFT
Sbjct: 615 FYIMIVCYIYFTRIIVDLLQMTVVFQYAWLDEMFREMATYVFFVLTGYKFRPVSSHPYFT 674

Query: 334 --PTHFDDVKPEVLSDIGILEGVTRI 357
                 DD + EVL++ G+ E V R+
Sbjct: 675 VPDEDEDDDEVEVLTESGLTETVHRV 700



 Score = 29.5 bits (63), Expect = 8.0
 Identities = 11/24 (45%), Positives = 18/24 (75%)

Query: 3  DDQRKYVDITTFGFLERGILEVNL 26
          +D+R+Y+ ++TFGF   G L+V L
Sbjct: 38 NDRRQYIALSTFGFYTNGHLDVQL 61


>AE014297-4313|AAF56852.1|  852|Drosophila melanogaster CG1401-PA
           protein.
          Length = 852

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 192 LSDRDKKLFMIVIPLQAEIILAESEEGAVEHNAWRDIFIVVELVC 236
           +  RD+ +F  V P +  I+L    +  V    W+D+F  V  VC
Sbjct: 5   IGKRDRDIFEEVWPDKRRIVLKLLRQDTVSQREWQDLFFGVHFVC 49


>BT024427-1|ABC86489.1|  361|Drosophila melanogaster IP02593p
           protein.
          Length = 361

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 28/81 (34%), Positives = 33/81 (40%), Gaps = 10/81 (12%)

Query: 56  FNNCPYKGEGNPTPVNAIIEIFESNEG--NYLSA-------GEIPLPLLYAVTSSIFLFC 106
           F N PY    NPT  NA +  F   EG  NY  A        E     L   T+ I LF 
Sbjct: 250 FGNRPYDKTMNPTQ-NAFVSAFTFGEGWHNYHHAFPWDYKTAEWGCYSLNITTAFIDLFA 308

Query: 107 AILWTYILKTSRQTVFRIHII 127
            I W Y LKT    V +  ++
Sbjct: 309 KIGWAYDLKTVAPDVIQRRVL 329


>AJ271415-1|CAB69054.1|  361|Drosophila melanogaster fatty acid
           desaturase protein.
          Length = 361

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 28/81 (34%), Positives = 33/81 (40%), Gaps = 10/81 (12%)

Query: 56  FNNCPYKGEGNPTPVNAIIEIFESNEG--NYLSA-------GEIPLPLLYAVTSSIFLFC 106
           F N PY    NPT  NA +  F   EG  NY  A        E     L   T+ I LF 
Sbjct: 250 FGNRPYDKTMNPTQ-NAFVSAFTFGEGWHNYHHAFPWDYKTAEWGCYSLNITTAFIDLFA 308

Query: 107 AILWTYILKTSRQTVFRIHII 127
            I W Y LKT    V +  ++
Sbjct: 309 KIGWAYDLKTVAPDVIQRRVL 329


>AE014297-1525|AAF54817.2|  361|Drosophila melanogaster CG5925-PA
           protein.
          Length = 361

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 28/81 (34%), Positives = 33/81 (40%), Gaps = 10/81 (12%)

Query: 56  FNNCPYKGEGNPTPVNAIIEIFESNEG--NYLSA-------GEIPLPLLYAVTSSIFLFC 106
           F N PY    NPT  NA +  F   EG  NY  A        E     L   T+ I LF 
Sbjct: 250 FGNRPYDKTMNPTQ-NAFVSAFTFGEGWHNYHHAFPWDYKTAEWGCYSLNITTAFIDLFA 308

Query: 107 AILWTYILKTSRQTVFRIHII 127
            I W Y LKT    V +  ++
Sbjct: 309 KIGWAYDLKTVAPDVIQRRVL 329


>AB055101-1|BAB21540.1|  361|Drosophila melanogaster fatty acid
           desaturase 2 protein.
          Length = 361

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 28/81 (34%), Positives = 33/81 (40%), Gaps = 10/81 (12%)

Query: 56  FNNCPYKGEGNPTPVNAIIEIFESNEG--NYLSA-------GEIPLPLLYAVTSSIFLFC 106
           F N PY    NPT  NA +  F   EG  NY  A        E     L   T+ I LF 
Sbjct: 250 FGNRPYDKTMNPTQ-NAFVSAFTFGEGWHNYHHAFPWDYKTAEWGCYSLNITTAFIDLFA 308

Query: 107 AILWTYILKTSRQTVFRIHII 127
            I W Y LKT    V +  ++
Sbjct: 309 KIGWAYDLKTVAPDVIQRRVL 329


>AB055100-1|BAB21539.1|  361|Drosophila melanogaster fatty acid
           desaturase 2 protein.
          Length = 361

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 28/81 (34%), Positives = 33/81 (40%), Gaps = 10/81 (12%)

Query: 56  FNNCPYKGEGNPTPVNAIIEIFESNEG--NYLSA-------GEIPLPLLYAVTSSIFLFC 106
           F N PY    NPT  NA +  F   EG  NY  A        E     L   T+ I LF 
Sbjct: 250 FGNRPYDKTMNPTQ-NAFVSAFTFGEGWHNYHHAFPWDYKTAEWGCYSLNITTAFIDLFA 308

Query: 107 AILWTYILKTSRQTVFRIHII 127
            I W Y LKT    V +  ++
Sbjct: 309 KIGWAYDLKTVAPDVIQRRVL 329


>AB055099-1|BAB21538.1|  361|Drosophila melanogaster fatty acid
           desaturase 2 protein.
          Length = 361

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 28/81 (34%), Positives = 33/81 (40%), Gaps = 10/81 (12%)

Query: 56  FNNCPYKGEGNPTPVNAIIEIFESNEG--NYLSA-------GEIPLPLLYAVTSSIFLFC 106
           F N PY    NPT  NA +  F   EG  NY  A        E     L   T+ I LF 
Sbjct: 250 FGNRPYDKTMNPTQ-NAFVSAFTFGEGWHNYHHAFPWDYKTAEWGCYSLNITTAFIDLFA 308

Query: 107 AILWTYILKTSRQTVFRIHII 127
            I W Y LKT    V +  ++
Sbjct: 309 KIGWAYDLKTVAPDVIQRRVL 329


>AB055098-1|BAB21537.1|  361|Drosophila melanogaster fatty acid
           desaturase 2 protein.
          Length = 361

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 28/81 (34%), Positives = 33/81 (40%), Gaps = 10/81 (12%)

Query: 56  FNNCPYKGEGNPTPVNAIIEIFESNEG--NYLSA-------GEIPLPLLYAVTSSIFLFC 106
           F N PY    NPT  NA +  F   EG  NY  A        E     L   T+ I LF 
Sbjct: 250 FGNRPYDKTMNPTQ-NAFVSAFTFGEGWHNYHHAFPWDYKTAEWGCYSLNITTAFIDLFA 308

Query: 107 AILWTYILKTSRQTVFRIHII 127
            I W Y LKT    V +  ++
Sbjct: 309 KIGWAYDLKTVAPDVIQRRVL 329


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.328    0.143    0.442 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,094,281
Number of Sequences: 52641
Number of extensions: 761999
Number of successful extensions: 1611
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1602
Number of HSP's gapped (non-prelim): 12
length of query: 380
length of database: 24,830,863
effective HSP length: 86
effective length of query: 294
effective length of database: 20,303,737
effective search space: 5969298678
effective search space used: 5969298678
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 63 (29.5 bits)