Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001998-TA|BGIBMGA001998-PA|IPR009637|Lung seven
transmembrane receptor
(380 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U56965-2|AAB52667.3| 581|Caenorhabditis elegans Hypothetical pr... 273 2e-73
U64598-2|AAK39214.2| 558|Caenorhabditis elegans Hypothetical pr... 38 0.012
AF039042-12|AAC48249.1| 352|Caenorhabditis elegans Hypothetical... 31 1.0
U41110-1|AAA82415.1| 506|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z29117-7|CAA82379.1| 159|Caenorhabditis elegans Hypothetical pr... 30 3.1
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein. 30 3.1
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p... 29 4.1
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p... 29 4.1
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr... 29 4.1
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 29 4.1
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 29 4.1
Z29121-6|CAH19096.1| 405|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z29121-5|CAD54174.2| 403|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z22180-10|CAH19086.1| 405|Caenorhabditis elegans Hypothetical p... 29 5.4
Z22180-9|CAD54147.2| 403|Caenorhabditis elegans Hypothetical pr... 29 5.4
AF022971-4|AAG23982.2| 579|Caenorhabditis elegans Hypothetical ... 29 5.4
AB007815-1|BAA28351.1| 579|Caenorhabditis elegans matrix metall... 29 5.4
Z82276-1|CAB05238.1| 319|Caenorhabditis elegans Hypothetical pr... 29 7.2
U88167-10|AAB42222.1| 804|Caenorhabditis elegans Hypothetical p... 29 7.2
U88167-9|AAK68288.1| 890|Caenorhabditis elegans Hypothetical pr... 29 7.2
U97014-1|AAB52425.1| 893|Caenorhabditis elegans Hypothetical pr... 28 9.5
>U56965-2|AAB52667.3| 581|Caenorhabditis elegans Hypothetical
protein C15H9.5 protein.
Length = 581
Score = 273 bits (669), Expect = 2e-73
Identities = 127/291 (43%), Positives = 187/291 (64%), Gaps = 9/291 (3%)
Query: 50 GLYNLYFNNC-PYKGEG--NPTPVNAIIEIFESNEGNYLSAGEIPLPLLYAVTSSIFLFC 106
G Y F+NC Y+ G + V+ +++ E N+ +YLS EI P +Y S ++
Sbjct: 212 GQYVFMFHNCYNYRAHGYSDRVAVDLTVDLVERNKHSYLSLQEIAKPEIYLYMSILYFGL 271
Query: 107 AILWTYIL-KTSRQTVFRIHIIMCILVYLKAASLAFHGINYHFIQIRGEHVTAWAILYYI 165
A+ W+++L +++ + ++R+H M +LV+LKA S+ FHG+NY+F+ G WA+LYYI
Sbjct: 272 AVYWSHLLCRSNSENIYRVHKFMAVLVFLKALSVFFHGLNYYFLSKYGMQKEIWAVLYYI 331
Query: 166 THLLKGAVLFVTIVLVGTGWNFIKHILSDRDKKLFMIVIPLQAE-----IILAESEEGAV 220
THLLKG +LF T++L+GTG+ FIK L+DRD+K+FM V+P+Q IIL ESE G
Sbjct: 332 THLLKGLLLFGTLILIGTGYTFIKQFLTDRDRKVFMFVLPIQVIDNIILIILNESEIGTQ 391
Query: 221 EHNAWRDIFIVVELVCCVAIVFPVVWSIRHLQDASTTDGKAAINLRKLKLFQHFYVMVAC 280
H W +F++++L CC + FP+VWSI+HL + +TTDGKAA NL KL+LF+ FY++V
Sbjct: 392 NHETWLKLFVILDLFCCALVAFPIVWSIQHLVEGATTDGKAAANLEKLRLFRQFYILVVV 451
Query: 281 YIYFTRIVVFILKKTVRFQYSWMDEMFRELATLVFFLMTGYKFRPAAANPY 331
YIY TR FIL + W E+ T FF++ GYKFRPA ++ Y
Sbjct: 452 YIYCTRFFGFILLHLMPVNLQWTIVAAVEMVTFAFFIIVGYKFRPANSHNY 502
>U64598-2|AAK39214.2| 558|Caenorhabditis elegans Hypothetical
protein C52B9.4 protein.
Length = 558
Score = 37.9 bits (84), Expect = 0.012
Identities = 60/273 (21%), Positives = 108/273 (39%), Gaps = 19/273 (6%)
Query: 84 YLSAGEIPLPLLYAVTSSIFLFCAILWTYILKTSRQTVFRIHIIMCILVYLKAASLAFHG 143
YLSA + PL Y + + A++W Y + + RI + ++ L AF
Sbjct: 207 YLSAIDWPLLRFYKIMCVFYSALALIWVYCCIKYYRDILRIQYWIGGVIVLGMVEKAFFL 266
Query: 144 INYHFIQIRGEHVTAWAILYYITHLLKGAVLFVTIVLVGTGWNFIKHILSDRDKKL--FM 201
Y + G + + I K + V +++V G+ +K L ++
Sbjct: 267 SEYATMNDTGSSIDGILEVAEIVSCAKKTMSRVLVIIVCVGYGVVKPRLGQTLNQVAGVG 326
Query: 202 IVIPLQAEII-LAESEEGAVEHNAWRDIFIVVELVCCVAIVFPVVWSIRHLQDASTTDG- 259
+V + I +A + VE + F + LV I+F W L AST
Sbjct: 327 LVYFIFCSIEGIARVSKNTVEATRQKQ-FAALPLVLTEMIIF--YWIFTSL--ASTIRML 381
Query: 260 KAAINLRKLKLFQHF-----YVMVACYIYFTRIVVFILKKTVRFQYS--WMDEMFRELAT 312
+ N KL +++HF + ++A I+ +++ + T R + W+D F +
Sbjct: 382 RLKRNDIKLNVYRHFANTLAFSVIASVIFMLWSMIYHIFPTCRVDWKELWVDTAFWHVLF 441
Query: 313 LVFFLMTGYKFRPAAANP--YFTPTHFDDVKPE 343
++ +RP+ N FTP DD + E
Sbjct: 442 CFILVVIMILWRPSQNNQRYAFTPL-LDDSEDE 473
>AF039042-12|AAC48249.1| 352|Caenorhabditis elegans Hypothetical
protein ZK697.1 protein.
Length = 352
Score = 31.5 bits (68), Expect = 1.0
Identities = 23/125 (18%), Positives = 53/125 (42%), Gaps = 3/125 (2%)
Query: 70 VNAIIEIFESNEGNYLSAGEIPLPLLYAVTSSIFLFCAILWTYILKTSRQTVFRI-HIIM 128
+N + E NY A + + L ++ C I +T++ R + +
Sbjct: 138 INLFTRLIADRESNYSLAAMLTIALFIYISIGFVFGCIISFTFLATMQRILILHFAQSQL 197
Query: 129 CILVYLKAASLAFHG-INYHFIQIRGEHVTAWAILYYITHLLKGAVLFVTIVLVGTGWNF 187
I +++ S+A + INY+F ++ E + + + H L +L + + G + +
Sbjct: 198 NIAIFVVYCSMASYSVINYNF-YLQKESLLKTDLTVEMWHNLFNGMLLLMTFITGCFYYY 256
Query: 188 IKHIL 192
I+ ++
Sbjct: 257 IRGLM 261
>U41110-1|AAA82415.1| 506|Caenorhabditis elegans Hypothetical
protein ZK682.2 protein.
Length = 506
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 213 AESEEGAVEHNAWRDIFIVVELVCCVAIVFPVVWSIRHLQDASTTDGKAAINLRKLKL 270
A +++G + W+ +F V+ +C V +F LQD +T KA I + + +L
Sbjct: 435 AYTKQGTADE--WKIVFAVIAAICVVTGIFFQCCGTASLQDWDSTHSKAPIEVAREEL 490
>Z29117-7|CAA82379.1| 159|Caenorhabditis elegans Hypothetical
protein C48B4.7 protein.
Length = 159
Score = 29.9 bits (64), Expect = 3.1
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 148 FIQIRGEHVTAWAILYYITHLLK--GAVLFVTIVLVGTGWNFIKHILSDRDKKLFMIVIP 205
F+ GE+ T AI YY++ +L AV+F+ ++ FI+ + RD K FM +
Sbjct: 67 FVAFLGEYGTMMAIHYYVSCILLIWPAVVFIMKLISLCNKLFIEENATSRDAKDFMKITA 126
Query: 206 LQAEII 211
+ +I
Sbjct: 127 ILFAVI 132
>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
Length = 1815
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 330 PYFTPTHFDDVKPEVLSDIGILEGVTRIPNRGERRREDLQPLMQDADYNSD 380
P+ H +DV+ +L+ G++E PN R + L +D+DY SD
Sbjct: 147 PFDVQGHDEDVQSRLLALNGLIEHDQLGPNNHHRAPFNHSGLSEDSDYTSD 197
>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 330 PYFTPTHFDDVKPEVLSDIGILEGVTRIPNRGERRREDLQPLMQDADYNSD 380
P+ H +D++ +L+ G++E PN R + L +D+DY SD
Sbjct: 147 PFDVQGHDEDIQSRLLALNGLIEHDQLGPNNHHRAPFNHSGLSEDSDYTSD 197
>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 330 PYFTPTHFDDVKPEVLSDIGILEGVTRIPNRGERRREDLQPLMQDADYNSD 380
P+ H +D++ +L+ G++E PN R + L +D+DY SD
Sbjct: 147 PFDVQGHDEDIQSRLLALNGLIEHDQLGPNNHHRAPFNHSGLSEDSDYTSD 197
>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 330 PYFTPTHFDDVKPEVLSDIGILEGVTRIPNRGERRREDLQPLMQDADYNSD 380
P+ H +D++ +L+ G++E PN R + L +D+DY SD
Sbjct: 147 PFDVQGHDEDIQSRLLALNGLIEHDQLGPNNHHRAPFNHSGLSEDSDYTSD 197
>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 330 PYFTPTHFDDVKPEVLSDIGILEGVTRIPNRGERRREDLQPLMQDADYNSD 380
P+ H +D++ +L+ G++E PN R + L +D+DY SD
Sbjct: 147 PFDVQGHDEDIQSRLLALNGLIEHDQLGPNNHHRAPFNHSGLSEDSDYTSD 197
>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 330 PYFTPTHFDDVKPEVLSDIGILEGVTRIPNRGERRREDLQPLMQDADYNSD 380
P+ H +D++ +L+ G++E PN R + L +D+DY SD
Sbjct: 147 PFDVQGHDEDIQSRLLALNGLIEHDQLGPNNHHRAPFNHSGLSEDSDYTSD 197
>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 330 PYFTPTHFDDVKPEVLSDIGILEGVTRIPNRGERRREDLQPLMQDADYNSD 380
P+ H +D++ +L+ G++E PN R + L +D+DY SD
Sbjct: 147 PFDVQGHDEDIQSRLLALNGLIEHDQLGPNNHHRAPFNHSGLSEDSDYTSD 197
>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 330 PYFTPTHFDDVKPEVLSDIGILEGVTRIPNRGERRREDLQPLMQDADYNSD 380
P+ H +D++ +L+ G++E PN R + L +D+DY SD
Sbjct: 147 PFDVQGHDEDIQSRLLALNGLIEHDQLGPNNHHRAPFNHSGLSEDSDYTSD 197
>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 330 PYFTPTHFDDVKPEVLSDIGILEGVTRIPNRGERRREDLQPLMQDADYNSD 380
P+ H +D++ +L+ G++E PN R + L +D+DY SD
Sbjct: 147 PFDVQGHDEDIQSRLLALNGLIEHDQLGPNNHHRAPFNHSGLSEDSDYTSD 197
>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 330 PYFTPTHFDDVKPEVLSDIGILEGVTRIPNRGERRREDLQPLMQDADYNSD 380
P+ H +D++ +L+ G++E PN R + L +D+DY SD
Sbjct: 147 PFDVQGHDEDIQSRLLALNGLIEHDQLGPNNHHRAPFNHSGLSEDSDYTSD 197
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 29.5 bits (63), Expect = 4.1
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 109 LWTYILKTSRQTVFRIHIIMCIL--VYLKAASLAFHGINYHFIQIRGEHVTAWAILYYIT 166
LW ++ T+ Q ++R+ ++C V+L AF H I + AIL +T
Sbjct: 4816 LWIGVILTNGQFLYRVGYLLCSACGVFLSPFFYAF-----HLIDVVLSFPMLKAILQSVT 4870
Query: 167 HLLKGAVLFVTIVLV 181
H L+ +L + + LV
Sbjct: 4871 HNLQQLILTIMMTLV 4885
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 29.5 bits (63), Expect = 4.1
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 109 LWTYILKTSRQTVFRIHIIMCIL--VYLKAASLAFHGINYHFIQIRGEHVTAWAILYYIT 166
LW ++ T+ Q ++R+ ++C V+L AF H I + AIL +T
Sbjct: 4808 LWIGVILTNGQFLYRVGYLLCSACGVFLSPFFYAF-----HLIDVVLSFPMLKAILQSVT 4862
Query: 167 HLLKGAVLFVTIVLV 181
H L+ +L + + LV
Sbjct: 4863 HNLQQLILTIMMTLV 4877
>Z29121-6|CAH19096.1| 405|Caenorhabditis elegans Hypothetical
protein ZK757.4b protein.
Length = 405
Score = 29.1 bits (62), Expect = 5.4
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 85 LSAGEIPLPLLYAVTSSIFLFCAILWTYILKTSRQTVFRIHIIMCILVYLKAASLAF-HG 143
LS G PL L ++ L + L+ Y L + + + ++ K A AF HG
Sbjct: 234 LSNGRFPLVFLLFLSCMFSLSLSFLFFYHLYLTAKNRTTVESFRAPMIDGKYAKDAFNHG 293
Query: 144 INYHFIQIRGEHVTAW 159
I ++ +I G H W
Sbjct: 294 IRANYREIFGSHPLYW 309
>Z29121-5|CAD54174.2| 403|Caenorhabditis elegans Hypothetical
protein ZK757.4a protein.
Length = 403
Score = 29.1 bits (62), Expect = 5.4
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 85 LSAGEIPLPLLYAVTSSIFLFCAILWTYILKTSRQTVFRIHIIMCILVYLKAASLAF-HG 143
LS G PL L ++ L + L+ Y L + + + ++ K A AF HG
Sbjct: 232 LSNGRFPLVFLLFLSCMFSLSLSFLFFYHLYLTAKNRTTVESFRAPMIDGKYAKDAFNHG 291
Query: 144 INYHFIQIRGEHVTAW 159
I ++ +I G H W
Sbjct: 292 IRANYREIFGSHPLYW 307
>Z22180-10|CAH19086.1| 405|Caenorhabditis elegans Hypothetical
protein ZK757.4b protein.
Length = 405
Score = 29.1 bits (62), Expect = 5.4
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 85 LSAGEIPLPLLYAVTSSIFLFCAILWTYILKTSRQTVFRIHIIMCILVYLKAASLAF-HG 143
LS G PL L ++ L + L+ Y L + + + ++ K A AF HG
Sbjct: 234 LSNGRFPLVFLLFLSCMFSLSLSFLFFYHLYLTAKNRTTVESFRAPMIDGKYAKDAFNHG 293
Query: 144 INYHFIQIRGEHVTAW 159
I ++ +I G H W
Sbjct: 294 IRANYREIFGSHPLYW 309
>Z22180-9|CAD54147.2| 403|Caenorhabditis elegans Hypothetical
protein ZK757.4a protein.
Length = 403
Score = 29.1 bits (62), Expect = 5.4
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 85 LSAGEIPLPLLYAVTSSIFLFCAILWTYILKTSRQTVFRIHIIMCILVYLKAASLAF-HG 143
LS G PL L ++ L + L+ Y L + + + ++ K A AF HG
Sbjct: 232 LSNGRFPLVFLLFLSCMFSLSLSFLFFYHLYLTAKNRTTVESFRAPMIDGKYAKDAFNHG 291
Query: 144 INYHFIQIRGEHVTAW 159
I ++ +I G H W
Sbjct: 292 IRANYREIFGSHPLYW 307
>AF022971-4|AAG23982.2| 579|Caenorhabditis elegans Hypothetical
protein C31B8.8 protein.
Length = 579
Score = 29.1 bits (62), Expect = 5.4
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 15 GFLERGILE-VNLVNFMMPSGPFGEFALYITSKKEEGLYNL---YFNNCPYKGEGNPTPV 70
GF G L +N +M SG EFA+Y + L N YF N P +G +P
Sbjct: 488 GFSVSGALRWINGHQILMSSGD--EFAVYDEFWNQVTLKNRISSYFPNLPRGVKGVESPA 545
Query: 71 NAIIEIFESNE 81
++I F SN+
Sbjct: 546 GSVITAFTSNQ 556
>AB007815-1|BAA28351.1| 579|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 579
Score = 29.1 bits (62), Expect = 5.4
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 15 GFLERGILE-VNLVNFMMPSGPFGEFALYITSKKEEGLYNL---YFNNCPYKGEGNPTPV 70
GF G L +N +M SG EFA+Y + L N YF N P +G +P
Sbjct: 488 GFSVSGALRWINGHQILMSSGD--EFAVYDEFWNQVTLKNRISSYFPNLPRGVKGVESPA 545
Query: 71 NAIIEIFESNE 81
++I F SN+
Sbjct: 546 GSVITAFTSNQ 556
>Z82276-1|CAB05238.1| 319|Caenorhabditis elegans Hypothetical
protein K03D3.1 protein.
Length = 319
Score = 28.7 bits (61), Expect = 7.2
Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 15/123 (12%)
Query: 73 IIEIFESNEG--NYLSAGEIPLPLLYAVTSSIFLFCAILWTYILKTSRQ---------TV 121
+ +FE++E N++ A + L L+ ++ ++LF + Y+ K +++ TV
Sbjct: 3 VTTMFENSEFALNFMKAANVGLHSLFLISVVLYLFVFPFYVYVFKLNKRRDKKTLLYPTV 62
Query: 122 FRIHIIMCILVYLKAASLAFHGINYHFIQIRG---EHVTAWAILYYIT-HLLKGAVLFVT 177
+ I+ I L +S+ F + HF G A A+++ T +LL A +T
Sbjct: 63 HHFYKIVKISYCLFVSSMMFGKLAIHFSYKNGLICALCFAIAVVFIFTLYLLTEAFHLIT 122
Query: 178 IVL 180
+L
Sbjct: 123 FLL 125
>U88167-10|AAB42222.1| 804|Caenorhabditis elegans Hypothetical
protein D2092.1a protein.
Length = 804
Score = 28.7 bits (61), Expect = 7.2
Identities = 24/117 (20%), Positives = 51/117 (43%), Gaps = 3/117 (2%)
Query: 252 QDASTTDGKAAINLRK-LKLFQHFYVMVACYIYFTRIVVFILKKTVRFQYSWMDEMFREL 310
Q + D K +R + Q + V Y++F ++ +K T F W+ + +
Sbjct: 678 QKSEEEDEKTGTGIRDAISSVQEILLSVQSYLHFATQLLQKIKNTFNFTDIWLSTLAVIV 737
Query: 311 ATLVFFLMTGYKFRPAAANPYFTPTHFDDVK-PEVLSDIGILEGVTRIPNRGERRRE 366
+L F L+ R + T ++ P + + +L+ ++R+P+R ER+ +
Sbjct: 738 LSLAFVLLYFVPLRWIIL-VWGTNKFSKKLRNPNFVDNNELLDFLSRVPSRTERQEQ 793
>U88167-9|AAK68288.1| 890|Caenorhabditis elegans Hypothetical
protein D2092.1b protein.
Length = 890
Score = 28.7 bits (61), Expect = 7.2
Identities = 24/117 (20%), Positives = 51/117 (43%), Gaps = 3/117 (2%)
Query: 252 QDASTTDGKAAINLRK-LKLFQHFYVMVACYIYFTRIVVFILKKTVRFQYSWMDEMFREL 310
Q + D K +R + Q + V Y++F ++ +K T F W+ + +
Sbjct: 764 QKSEEEDEKTGTGIRDAISSVQEILLSVQSYLHFATQLLQKIKNTFNFTDIWLSTLAVIV 823
Query: 311 ATLVFFLMTGYKFRPAAANPYFTPTHFDDVK-PEVLSDIGILEGVTRIPNRGERRRE 366
+L F L+ R + T ++ P + + +L+ ++R+P+R ER+ +
Sbjct: 824 LSLAFVLLYFVPLRWIIL-VWGTNKFSKKLRNPNFVDNNELLDFLSRVPSRTERQEQ 879
>U97014-1|AAB52425.1| 893|Caenorhabditis elegans Hypothetical
protein T05E8.1 protein.
Length = 893
Score = 28.3 bits (60), Expect = 9.5
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 263 INLRKLKLFQHFYVMVACYIYFTR 286
IN RK+K Q FYVMV C + T+
Sbjct: 258 INERKIKKKQRFYVMVQCGAHKTK 281
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.328 0.143 0.442
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,587,195
Number of Sequences: 27539
Number of extensions: 416560
Number of successful extensions: 1182
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1160
Number of HSP's gapped (non-prelim): 29
length of query: 380
length of database: 12,573,161
effective HSP length: 83
effective length of query: 297
effective length of database: 10,287,424
effective search space: 3055364928
effective search space used: 3055364928
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 60 (28.3 bits)
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