GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001997-TA|BGIBMGA001997-PA|undefined
         (128 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060805-1|AAL28353.1|  294|Drosophila melanogaster GH27208p pro...    33   0.15 
AE014296-1595|AAF50312.2|  294|Drosophila melanogaster CG4641-PA...    33   0.15 

>AY060805-1|AAL28353.1|  294|Drosophila melanogaster GH27208p
           protein.
          Length = 294

 Score = 32.7 bits (71), Expect = 0.15
 Identities = 15/21 (71%), Positives = 18/21 (85%)

Query: 108 IPDELEPAQLARLTDLKESNA 128
           IP+EL+  QLARL +LKESNA
Sbjct: 274 IPEELDSNQLARLQNLKESNA 294



 Score = 30.3 bits (65), Expect = 0.82
 Identities = 13/20 (65%), Positives = 15/20 (75%)

Query: 20 AGECGLGFAQIVITAATPMV 39
          A    LG AQI++TAATPMV
Sbjct: 68 ANTLNLGMAQIIVTAATPMV 87


>AE014296-1595|AAF50312.2|  294|Drosophila melanogaster CG4641-PA
           protein.
          Length = 294

 Score = 32.7 bits (71), Expect = 0.15
 Identities = 15/21 (71%), Positives = 18/21 (85%)

Query: 108 IPDELEPAQLARLTDLKESNA 128
           IP+EL+  QLARL +LKESNA
Sbjct: 274 IPEELDSNQLARLQNLKESNA 294



 Score = 30.3 bits (65), Expect = 0.82
 Identities = 13/20 (65%), Positives = 15/20 (75%)

Query: 20 AGECGLGFAQIVITAATPMV 39
          A    LG AQI++TAATPMV
Sbjct: 68 ANTLNLGMAQIIVTAATPMV 87


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.317    0.131    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,423,539
Number of Sequences: 52641
Number of extensions: 30400
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 4
length of query: 128
length of database: 24,830,863
effective HSP length: 77
effective length of query: 51
effective length of database: 20,777,506
effective search space: 1059652806
effective search space used: 1059652806
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)