GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001995-TA|BGIBMGA001995-PA|IPR001060|Cdc15/Fes/CIP4
         (53 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    19   3.6  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    19   3.6  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    19   4.8  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    19   6.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    18   8.4  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 12  KNLHTEQIAKLHAKNQHECDLLEDL 36
           K LH   I     K ++ECD ++ L
Sbjct: 155 KKLHGTDIEMRILKTKNECDHVQFL 179


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 12  KNLHTEQIAKLHAKNQHECDLLEDL 36
           K LH   I     K ++ECD ++ L
Sbjct: 155 KKLHGTDIEMRILKTKNECDHVQFL 179


>AF388659-2|AAK71994.1|  463|Apis mellifera
          1D-myo-inositol-trisphosphate 3-kinaseisoform B
          protein.
          Length = 463

 Score = 19.0 bits (37), Expect = 4.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)

Query: 19 IAKLHAKNQHECDLLED 35
          +AK+  +N HE D L +
Sbjct: 45 LAKIEKQNLHESDDLHE 61


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 18.6 bits (36), Expect = 6.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)

Query: 15  HTEQIAKLHAKN 26
           +TE IAK+ +KN
Sbjct: 304 NTESIAKIMSKN 315


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 18.2 bits (35), Expect = 8.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)

Query: 9   KFLKNLHTEQIAKLHAKNQHE 29
           K L    TEQ  ++ A+ QH+
Sbjct: 405 KLLAFKMTEQQQQMQAQQQHQ 425


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.130    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,793
Number of Sequences: 429
Number of extensions: 469
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 53
length of database: 140,377
effective HSP length: 33
effective length of query: 20
effective length of database: 126,220
effective search space:  2524400
effective search space used:  2524400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.0 bits)
S2: 35 (18.2 bits)