Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001993-TA|BGIBMGA001993-PA|undefined
(190 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32425| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_702| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_9920| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.26
SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_22890| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.00078) 30 1.4
SB_52453| Best HMM Match : cNMP_binding (HMM E-Value=1.9e-26) 29 2.4
SB_28288| Best HMM Match : E-MAP-115 (HMM E-Value=0.076) 29 2.4
SB_27869| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_18003| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_44005| Best HMM Match : CUE (HMM E-Value=0.38) 29 3.2
SB_2228| Best HMM Match : Pox_A32 (HMM E-Value=0.099) 28 5.6
SB_59755| Best HMM Match : SAM_PNT (HMM E-Value=2.8) 28 5.6
SB_39180| Best HMM Match : Herpes_LP (HMM E-Value=7.7) 28 5.6
SB_24578| Best HMM Match : rve (HMM E-Value=4.8e-35) 27 7.4
SB_43213| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_13303| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_29202| Best HMM Match : SH3_1 (HMM E-Value=3.9e-12) 27 9.8
>SB_32425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 115 RSPNFQEFHFTTPARAEAACSYDLDATDIAWLKLLNSERARAGAAPINEDQLEKVIEELE 174
R + F T + YD+D D AWL +N +R AP++++ E +++ LE
Sbjct: 178 RPTTYFRFIEQTTEEMDEMVEYDMDEEDYAWLDFVNDKRKADSIAPVSQEVFETLMDRLE 237
>SB_702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 36.7 bits (81), Expect = 0.012
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
Query: 96 VPVNPDSLPAPKVKIIENPRSPNFQEFHFTTPARAEAACSYDLDATDIAWLKLLN 150
VPVNPD L P R P F + +R + C YDL+ TD+ WL LN
Sbjct: 408 VPVNPDGLSQPCA------RPPKFLKADEKKKSRTQ--CIYDLNRTDVEWLTALN 454
>SB_9920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 601
Score = 32.3 bits (70), Expect = 0.26
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 90 WERGVQVPVNPDSLPAPKVKIIENPRSPNFQEFHFTTPARAEAACSYDLDATDIAWLKLL 149
W RG + NP L + K E P+ + P A+ C +DL+ D++ L+LL
Sbjct: 276 WNRGKKRQKNPKPLHEAEYKPSEVPKKTKLYNWD---PRPAKVPCDFDLEDADLSILRLL 332
>SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2070
Score = 29.9 bits (64), Expect = 1.4
Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 6/120 (5%)
Query: 4 RGTKRATVTRGEEPSTSKRRRMEPEDPLWQLRPVSDLKMSSIYNRSASEAPAELFRKDLI 63
+G K RG P +++ PE+P + +P +D + + + A ++ L
Sbjct: 1314 KGRKNPAKKRGA-PRGNRKFLAIPENPHNRQKPAADSALPLVEDTVRRPAISQQCANQLN 1372
Query: 64 SAMK--LPDNEPLTPSEYWIITDTWKQDWERGVQVPVNPDSLPAPKVKIIENPRSPNFQE 121
+MK L PS W W D++ + + LP P K+ + PNF E
Sbjct: 1373 KSMKWITMRTATLPPSTRWAY---WIADFDFLSKSAIQALRLPVPAPKVNNMEKVPNFGE 1429
>SB_22890| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.00078)
Length = 788
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 71 NEPLTPSEYWIITDTWKQDWERGVQVPVNPDSLPAPKVKIIE 112
+EP+ ++ + KQDW RG+++ + +L P + +IE
Sbjct: 186 SEPVQVNDSTRVVQARKQDWLRGMRMRIRYSALAIPIISLIE 227
>SB_52453| Best HMM Match : cNMP_binding (HMM E-Value=1.9e-26)
Length = 370
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 153 RARAGAAPINEDQLEKVIEELEISMLKLRTSQR-ITRL 189
R AAPI ED+ +++++IS + + + R ITRL
Sbjct: 95 RGAVSAAPITEDEATSYVKKVQISFVPVASKHRIITRL 132
>SB_28288| Best HMM Match : E-MAP-115 (HMM E-Value=0.076)
Length = 784
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 23 RRMEPEDPLWQLRPVSDLKMSSIYNRSASEAPAELFRKDLISAMKLPDNEPL 74
R++ D WQL+ SD+K+ S R A A E + ++L PL
Sbjct: 638 RKVMANDSSWQLKKTSDVKIKSF--READRARREEYEQELRDMQSRVSQRPL 687
>SB_27869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 23 RRMEPEDPLWQLRPVSDLKMSSIYNRSASEAPAELFRKDLISAMKLPDNEPL 74
R++ D WQL+ SD+K+ S R A A E + ++L PL
Sbjct: 193 RKVMANDSSWQLKKTSDVKIKSF--READRARREEYEQELRDMQSRVSQRPL 242
>SB_18003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 15 EEPSTSKRRRMEPEDPLWQLRPVSDLKMSSIYNRSAS 51
+E ++S R R E + P+WQ R ++S Y+ SAS
Sbjct: 461 DESNSSVRTRPEGKQPVWQNRESLGSEVSGYYSYSAS 497
>SB_44005| Best HMM Match : CUE (HMM E-Value=0.38)
Length = 761
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 18 STSKRRRMEPEDPLWQLRPVSDLKMSSIYNRSASEAPAELFRKD 61
S+ KR+++ PED L + + D K + + + A + E R++
Sbjct: 312 SSGKRKKLTPEDSLRRKQAAQDKKQAKVREKQAKQQAQEKKRQE 355
>SB_2228| Best HMM Match : Pox_A32 (HMM E-Value=0.099)
Length = 771
Score = 27.9 bits (59), Expect = 5.6
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 28 EDPLWQLRPVSDLKMSSIYNRSASEAPAELFRKDLISAMKLPDNEPLTPSEYWIITD 84
EDP LRP S + S Y +S +P E I+ KL +N + P ++ D
Sbjct: 114 EDPTGTLRPESGIVAESDYIQSLIASPGETL---YINIPKLAENVVIVPGSVSLLFD 167
>SB_59755| Best HMM Match : SAM_PNT (HMM E-Value=2.8)
Length = 650
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/49 (30%), Positives = 21/49 (42%)
Query: 120 QEFHFTTPARAEAACSYDLDATDIAWLKLLNSERARAGAAPINEDQLEK 168
Q H E YDLD+ D WLK N +++ I + + EK
Sbjct: 97 QYIHVQACGLEEDVPDYDLDSEDEEWLKNFNKKKSDPAICLIPQVRAEK 145
>SB_39180| Best HMM Match : Herpes_LP (HMM E-Value=7.7)
Length = 268
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 6 TKRATVTRGEEPSTSKRRRMEPED 29
+K AT RGE S++RR PED
Sbjct: 241 SKTATTNRGERRRRSQKRRQVPED 264
>SB_24578| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1772
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 33 QLRPVSDLKMSSIYNRSASEAPAELFRKDLISAMKLPD 70
QLRPV+ + + +RS S +P L R+++ SA LPD
Sbjct: 1183 QLRPVAKVSSTRSRSRSPSRSPRRL-RRNIFSA-SLPD 1218
>SB_43213| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 27.1 bits (57), Expect = 9.8
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Query: 71 NEPLTPSEYWIITDTWKQDWERGVQVPVNPDSLPAPKVKIIENPRSPNFQEFHFTTPARA 130
N+P T + TW D RGV P P + PK K++ +P + PA A
Sbjct: 294 NKPTTEEKPAPAKSTWA-DLFRGVPKPTPPVAALPPKPKVV---ATPPLETKKIEDPALA 349
Query: 131 EAACSYDLDATDIA 144
+ D A IA
Sbjct: 350 VVSVGEDKAAQQIA 363
>SB_13303| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 27.1 bits (57), Expect = 9.8
Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 52 EAPAELFRKDLISAMKLPDNEPL--TPSEYWIITDTWKQDWERGVQVPVNPDSLPAPKVK 109
++PA + +L D+EP +E + + K+D E V+ V P+ A V
Sbjct: 5 DSPALFEDEPSADTTQLEDDEPNFGNTTEICLDGEGAKKDQEASVKEDVTPEEKAAASVN 64
Query: 110 IIENPRSPNFQEFHFTTPARAEAACSYDLDATD 142
+ P S + + R E Y+ + TD
Sbjct: 65 VTNIPESESAGKADEPVKPRQEEKEEYEEEETD 97
>SB_29202| Best HMM Match : SH3_1 (HMM E-Value=3.9e-12)
Length = 364
Score = 27.1 bits (57), Expect = 9.8
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Query: 77 SEYWIITDTWKQDWERGVQVPVNPDSLPA--PKVKIIENPRSPNFQEFHFTTPARAEAAC 134
++Y+ + QD +R + P DS+P P + R + +A
Sbjct: 128 AQYYAQCFQYMQDLQRQLGTPPPTDSVPLVPPTAPSAADVRGVLDVNAYPRPSVTKKAKV 187
Query: 135 SYDLDATDIAWLKLLNSE 152
YD DATD + L LL+ E
Sbjct: 188 LYDYDATDSSELSLLSDE 205
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.129 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,525,557
Number of Sequences: 59808
Number of extensions: 269040
Number of successful extensions: 630
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 621
Number of HSP's gapped (non-prelim): 17
length of query: 190
length of database: 16,821,457
effective HSP length: 78
effective length of query: 112
effective length of database: 12,156,433
effective search space: 1361520496
effective search space used: 1361520496
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)
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