GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001993-TA|BGIBMGA001993-PA|undefined
         (190 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    24   3.4  
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       23   5.9  
CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal pe...    23   5.9  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   5.9  
Z22930-6|CAA80518.1|  277|Anopheles gambiae trypsin protein.           23   7.8  
Z18890-1|CAA79328.1|  277|Anopheles gambiae trypsin protein.           23   7.8  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 92  RGVQVPVNPDSLPAPKVKIIENPRSPNFQE 121
           R V+  V  DS+  P+  + + PR+PN +E
Sbjct: 66  RYVEGEVKKDSVQIPECSVDDWPRAPNPRE 95


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 99  NPDSLPAPKVKIIENPRSPNFQEFHFTTPARAE 131
           NPD+L   +  +++ P      +F   T +RAE
Sbjct: 380 NPDTLSTVQKSLVQMPVQICIPKFRIDTTSRAE 412


>CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal
           peptidase protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)

Query: 92  RGVQVPVNPDSLPAPKVKIIENPR 115
           RGV +    DS P P+  I+  PR
Sbjct: 179 RGVDILPEEDSHPEPRTSIVIVPR 202


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 119 FQEFHFTTPARAEAACS-YDLDATDIAWLKLLNSERARAGAAPINEDQLE 167
           F ++ FT   R + +   YD +AT+  +  +   ++A AGAA  +E  L+
Sbjct: 933 FVKYTFTKVLRLQKSLMLYDANATENCFFIVPTVKQAVAGAAGKDEPPLQ 982


>Z22930-6|CAA80518.1|  277|Anopheles gambiae trypsin protein.
          Length = 277

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 46  YNRSASEAPAELFRKDLISAMKLPDN-EPLTP 76
           ++ S  E   EL   DL+  ++LP++ EP+ P
Sbjct: 135 FDFSLMELETELTFSDLVQPVELPEHEEPVEP 166


>Z18890-1|CAA79328.1|  277|Anopheles gambiae trypsin protein.
          Length = 277

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 46  YNRSASEAPAELFRKDLISAMKLPDN-EPLTP 76
           ++ S  E   EL   DL+  ++LP++ EP+ P
Sbjct: 135 FDFSLMELETELTFSDLVQPVELPEHEEPVEP 166


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.314    0.129    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,623
Number of Sequences: 2123
Number of extensions: 7183
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 6
length of query: 190
length of database: 516,269
effective HSP length: 60
effective length of query: 130
effective length of database: 388,889
effective search space: 50555570
effective search space used: 50555570
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 46 (22.6 bits)