GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001993-TA|BGIBMGA001993-PA|undefined
         (190 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    22   3.3  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   10.0 

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 11/24 (45%), Positives = 13/24 (54%)

Query: 133 ACSYDLDATDIAWLKLLNSERARA 156
           AC Y L+  D+   KLL   R RA
Sbjct: 158 ACPYTLNIFDLTSDKLLRQYRLRA 181


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 5/18 (27%), Positives = 11/18 (61%)

Query: 73 PLTPSEYWIITDTWKQDW 90
          P+T  E W++ +  ++ W
Sbjct: 28 PITGDEKWVVNNIKRKRW 45


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.314    0.129    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,193
Number of Sequences: 429
Number of extensions: 2427
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 190
length of database: 140,377
effective HSP length: 54
effective length of query: 136
effective length of database: 117,211
effective search space: 15940696
effective search space used: 15940696
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 41 (20.6 bits)