Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001992-TA|BGIBMGA001992-PA|IPR000198|RhoGAP,
IPR008936|Rho GTPase activation protein
(146 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43333| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 1e-26
SB_718| Best HMM Match : RhoGAP (HMM E-Value=0) 77 6e-15
SB_48764| Best HMM Match : RhoGAP (HMM E-Value=0) 72 2e-13
SB_42552| Best HMM Match : RhoGAP (HMM E-Value=0) 64 3e-11
SB_38980| Best HMM Match : RhoGAP (HMM E-Value=0) 62 2e-10
SB_45475| Best HMM Match : RhoGAP (HMM E-Value=1.26117e-44) 61 3e-10
SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 9e-10
SB_42550| Best HMM Match : RhoGAP (HMM E-Value=0) 54 4e-08
SB_42987| Best HMM Match : RhoGAP (HMM E-Value=2.7e-26) 53 8e-08
SB_12981| Best HMM Match : RhoGAP (HMM E-Value=0) 53 1e-07
SB_19750| Best HMM Match : RhoGAP (HMM E-Value=8.4e-34) 52 1e-07
SB_4894| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_31002| Best HMM Match : RhoGAP (HMM E-Value=0) 51 3e-07
SB_40773| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 8e-07
SB_31303| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 3e-05
SB_16463| Best HMM Match : RhoGAP (HMM E-Value=5.7e-25) 43 9e-05
SB_36803| Best HMM Match : RhoGAP (HMM E-Value=0) 42 2e-04
SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_43370| Best HMM Match : RhoGAP (HMM E-Value=1.6e-18) 39 0.002
SB_19709| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_12853| Best HMM Match : RhoGAP (HMM E-Value=9.5e-13) 31 0.29
SB_7782| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.50
SB_22677| Best HMM Match : RhoGAP (HMM E-Value=9.4e-13) 28 3.5
SB_55492| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.7
SB_52960| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_48713| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_47786| Best HMM Match : Ank (HMM E-Value=4.4e-30) 27 6.2
SB_30338| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_53578| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_12754| Best HMM Match : Vicilin_N (HMM E-Value=0.49) 27 6.2
SB_33219| Best HMM Match : RhoGAP (HMM E-Value=0.0014) 27 8.2
>SB_43333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 116 bits (278), Expect = 1e-26
Identities = 63/144 (43%), Positives = 88/144 (61%), Gaps = 4/144 (2%)
Query: 4 VKQLQNSCNQGEPISFRD--DPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQSWPNAEK 61
VKQ+ NQG P+ + + D H AA ++K FLR+L EP+LTY+L + I + + + +K
Sbjct: 302 VKQVTVMFNQGTPVDYTELGDVHCAAAIIKKFLRELPEPLLTYELCDVINEIVALGDRDK 361
Query: 62 P-RNVKILILERLPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWPPSGQ 120
+ RLP EN+ LLK++ +FL +V+ NKMT SNLA+VFGPNL W +
Sbjct: 362 KLMETWSALHNRLPAENFALLKFIMEFLQEVQQHPA-NKMTASNLAIVFGPNLIWGRTAA 420
Query: 121 MSLQAIAPINAFTDFTLENQESIF 144
SL A+A IN FT LEN E +F
Sbjct: 421 SSLDAMAQINTFTCLVLENTEYLF 444
>SB_718| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 598
Score = 77.0 bits (181), Expect = 6e-15
Identities = 39/95 (41%), Positives = 57/95 (60%)
Query: 22 DPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQSWPNAEKPRNVKILILERLPIENYKLL 81
D H A L K +LRDL EP+ T +LY++ +K + +AE+ R + + LP N
Sbjct: 397 DIHAVAGLFKMYLRDLPEPLFTDELYDKFVKAYAMADAEEKRETMLELFRSLPTPNRLTA 456
Query: 82 KYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWP 116
YLFQ L KV ++S ++KM +NL+ VFGPN+ P
Sbjct: 457 CYLFQHLRKVAEKSEVHKMGLNNLSTVFGPNVLRP 491
>SB_48764| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 583
Score = 71.7 bits (168), Expect = 2e-13
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 22 DPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQSWPNAEKPRNVKIL-ILERLPIENYKL 80
D H + LLK + R+L P+LTY LY++ + + EK R V I ++++LP +Y+
Sbjct: 73 DVHCISSLLKMYFRELPNPLLTYSLYDKFVSAIQITD-EKERKVAIHHVVQQLPPPHYRT 131
Query: 81 LKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWPPSGQMSLQAIAPINA---FTDFTL 137
L+YL Q L KV + M NLA+V+ PNL P S + A+ IN ++ +
Sbjct: 132 LEYLLQHLAKVASHAGQTAMHAKNLAIVWAPNLLKPRSQEYGSTALLEINVQAIIVEYLI 191
Query: 138 ENQESIF 144
N +F
Sbjct: 192 RNAAELF 198
>SB_42552| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 945
Score = 64.5 bits (150), Expect = 3e-11
Identities = 45/123 (36%), Positives = 58/123 (47%), Gaps = 13/123 (10%)
Query: 4 VKQLQNSCNQGEPISFR--DDPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQSWPNAEK 61
+KQ++ + GE F D+PH A L K +LRDL EP+LT +LY L+ Q + K
Sbjct: 437 MKQMREQFDSGEKTQFNAEDNPHDVAALFKEYLRDLPEPLLTRELYSAFLETQGISDTAK 496
Query: 62 PRNVKILILERLPIENYKLLKYLFQFLWKV--------KDRSC---LNKMTCSNLAVVFG 110
L+ LP N L L FL KV D C NKM NLA + G
Sbjct: 497 EIEALQLLCCLLPAANRDTLNALLAFLSKVDFYAEDKIDDMGCDIPGNKMNSKNLATLIG 556
Query: 111 PNL 113
PN+
Sbjct: 557 PNI 559
>SB_38980| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 367
Score = 62.1 bits (144), Expect = 2e-10
Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 22 DPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQSWPNAEKPRNVKIL--ILERLPIENYK 79
D A LLK FLR+L EP + L + +K + P + L +L++LP NY+
Sbjct: 242 DVMAVAGLLKLFLRELPEPPVPQALTTDFIKVHEVYGDDNPDCLDELRALLDKLPYLNYE 301
Query: 80 LLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWPPSGQMSLQAIAPINAFTDFTLEN 139
LLK+L FL +V NKM+ LA+VFGPN G L+ N+ L+
Sbjct: 302 LLKFLCHFLVEVSMNEENNKMSTMALAIVFGPNFFRCKDGLDGLREQGHTNSIVCMFLKE 361
Query: 140 QESIF 144
+ +F
Sbjct: 362 YDQLF 366
>SB_45475| Best HMM Match : RhoGAP (HMM E-Value=1.26117e-44)
Length = 552
Score = 61.3 bits (142), Expect = 3e-10
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 5 KQLQNSCNQGEPISFRDDPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQSWPNAEKPRN 64
K L+ GE IS PH A L+K F R L+EP+LT ++ +K +
Sbjct: 224 KLLKERIELGEEISTAQ-PHDVAGLMKQFFRQLQEPLLTNTYHDSFIKTMRIEDDNTRTK 282
Query: 65 VKILILERLPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNL 113
+ I LP+ + + LKY +FL + S +KM SNLA+V PNL
Sbjct: 283 AMLYICLLLPLAHLQALKYTMKFLAEFASHSEKSKMGFSNLAIVLTPNL 331
>SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 59.7 bits (138), Expect = 9e-10
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 4/119 (3%)
Query: 29 LLKTFLRDLEEPVLTYDLYEEILKFQSWPN-AEKPRNVKILILERLPIENYKLLKYLFQF 87
L + FLR L + +L + Y++++ + N AE+ + +K LILE L + + ++LK
Sbjct: 740 LFQEFLRRLPDCILDSEYYDDLVATNNIENDAERAQQIK-LILENLSVYSIEILKRFLCV 798
Query: 88 LWKVKDRSCLNKMTCSNLAVVFGPNLAWPPSGQ--MSLQAIAPINAFTDFTLENQESIF 144
L+ + D + +N MT NLAV P++ W P G + + + + F +E+ IF
Sbjct: 799 LYHIADNADVNNMTAYNLAVCVAPSMLWAPKGSSVAATEQSSAVPPVVQFMIEHFVDIF 857
>SB_42550| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 790
Score = 54.4 bits (125), Expect = 4e-08
Identities = 31/91 (34%), Positives = 48/91 (52%)
Query: 23 PHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQSWPNAEKPRNVKILILERLPIENYKLLK 82
P+ A +LK + RDL +P+LT L E + ++ AE + +P EN + L+
Sbjct: 368 PYDLADMLKQYFRDLPDPILTSKLAETFITIHTYIPAELRVEAMQAAILLMPDENREALQ 427
Query: 83 YLFQFLWKVKDRSCLNKMTCSNLAVVFGPNL 113
L FL +V + S +N+M NL V F P+L
Sbjct: 428 TLLLFLNEVAENSAVNQMNEKNLGVCFAPSL 458
>SB_42987| Best HMM Match : RhoGAP (HMM E-Value=2.7e-26)
Length = 139
Score = 53.2 bits (122), Expect = 8e-08
Identities = 30/103 (29%), Positives = 48/103 (46%)
Query: 17 ISFRDDPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQSWPNAEKPRNVKILILERLPIE 76
+S DD + + K + R L P++T++ Y + + + L LP
Sbjct: 7 LSTYDDINTITGVCKLYFRQLPLPLITFETYSKFIAAAKTQDKHLRIEELSKALGELPQA 66
Query: 77 NYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWPPSG 119
+Y+ +K+L L +V R N MT NL++VFGP L P G
Sbjct: 67 HYETMKFLMGHLHRVSQRRSKNMMTEENLSIVFGPTLMRAPEG 109
>SB_12981| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 251
Score = 52.8 bits (121), Expect = 1e-07
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 28/168 (16%)
Query: 4 VKQLQNSCNQGEPISFR----DDPHIAAVLLKTFLRDLEEPVLTYDLYE--------EIL 51
V++++ +Q EPI+ DD H A LK + R++ EP++ +D + E+
Sbjct: 84 VQRIRIMVDQEEPIALGESPFDDVHALAGSLKLYFREMPEPLVPFDFFSGFVEAIIFELS 143
Query: 52 KFQSWPNA---------EKPRNVKILILE----RLPIENYKLLKYLFQFLWKVKDRSCLN 98
PN + RN K+ L+ +LP N+ LK L L KV S +N
Sbjct: 144 GLNGLPNRYRFYRLSSEQSTRNSKLGALKSLVGQLPRINFDTLKLLLGHLHKVMGFSEVN 203
Query: 99 KMTCSNLAVVFGPNLAWP--PSGQMSLQAIAPINAFTDFTLENQESIF 144
+M NLA+V+GPN+ P +G +++ + N +F L + IF
Sbjct: 204 RMHAQNLAIVWGPNMMRPRYDAGNIAMNMVYQ-NQIVEFLLLEYDEIF 250
>SB_19750| Best HMM Match : RhoGAP (HMM E-Value=8.4e-34)
Length = 128
Score = 52.4 bits (120), Expect = 1e-07
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 22 DPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQSWPNAEKPRNVKILILERLPIENYKLL 81
D H A L K +LRDL EP+ T +LY++ +K + +AE+ R + + + LP N
Sbjct: 60 DIHAVAGLFKMYLRDLPEPLFTDELYDKFVKAYAMADAEEKRETMLELFQSLPTPNRLTA 119
Query: 82 KYLFQFL 88
YLFQ L
Sbjct: 120 CYLFQHL 126
>SB_4894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 486
Score = 52.0 bits (119), Expect = 2e-07
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 7/115 (6%)
Query: 4 VKQLQNSCNQGEPISFRD-DPHIAAVLLKTFLRDLEEPVLTYDL---YEEILKFQSWPNA 59
V L+ +QG+ + ++ +P + A ++K +LR+L E VLT L + E++ Q
Sbjct: 149 VDALKELYDQGKQVDLKEYEPEVVASIVKQYLRELPESVLTMMLAPRFNELIGIQD--KK 206
Query: 60 EKPRNVKILILERLPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLA 114
E+ K L+ E LP N LL + + V D++ NKM+ N+++V P ++
Sbjct: 207 EQLEKTKQLLAE-LPSPNRTLLAWTMVHMGHVIDKASENKMSLQNISIVLNPTMS 260
>SB_31002| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 1250
Score = 51.2 bits (117), Expect = 3e-07
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 21/115 (18%)
Query: 23 PHIAAVLLKTFLRDLEEPVLTYDLYEEILK-----------FQSWPNAEKPRNVKILILE 71
PH+ A +LK +LR L EP+LT+ LY E +K S NA + +++ +E
Sbjct: 314 PHVIAAVLKLYLRQLPEPLLTFKLYPEFIKLAKESFNTIDNLTSCKNASQDESIRQDYVE 373
Query: 72 ----------RLPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWP 116
+LP N+K + + L V N M+ SNL +VFGP L P
Sbjct: 374 LVQKLRHAVVKLPKANFKTAAKIIEHLHLVAANEDENSMSGSNLGIVFGPTLLRP 428
>SB_40773| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 953
Score = 50.0 bits (114), Expect = 8e-07
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 24 HIAAVLLKTFLRDLEEPVLT---YDLYEEILKFQS-WPNAEKPRNVKILILERLPIENYK 79
H A +LK FL +L EP+LT Y Y ++ + + NA+ +++L L +P EN
Sbjct: 110 HDVASVLKQFLGELPEPLLTQAPYRAYLQVTEISNDQGNAKHVEALQLLFL-MIPPENRS 168
Query: 80 LLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAW 115
LL L + L V + NKMT NLAVVF PN+ +
Sbjct: 169 LLHNLLELLKLVLENPN-NKMTAYNLAVVFCPNVLY 203
>SB_31303| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 4 VKQLQNSCNQGEPISFRD--DPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQSWPNAEK 61
+ L+ N+GE D D H A LLK +LR+L EPV+ YD +E L +P
Sbjct: 148 ISTLKAQFNRGESPELSDEKDIHTVASLLKLYLRELSEPVIPYDFFEVFLTAAKYPQVMM 207
Query: 62 PRNVKILILERLPIENYKL 80
++ L + I+ ++L
Sbjct: 208 ESTGQVTALVSIFIKRHQL 226
>SB_16463| Best HMM Match : RhoGAP (HMM E-Value=5.7e-25)
Length = 252
Score = 43.2 bits (97), Expect = 9e-05
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 29 LLKTFLRDLEEPVLTYDLYEEILKFQSWPNAEKPRNVKILILERLPIENYKLLKYLFQFL 88
LLK FLR L E ++T +LYE ++ + + +++ LP NY+ L++L L
Sbjct: 45 LLKQFLRKLPEGLVTAELYESFIEANRKDDPVERMGALKMLINELPDHNYETLRHLLTHL 104
Query: 89 WKVKDRSCLNKM 100
V + + NKM
Sbjct: 105 KHVAEHADTNKM 116
>SB_36803| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 1277
Score = 42.3 bits (95), Expect = 2e-04
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 5/126 (3%)
Query: 22 DPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQSWPNAEKP----RNVKILILERLPIEN 77
D ++ +LK +LR+L EP++T + E + K +K R V +L LP N
Sbjct: 998 DINVITGILKDYLRELPEPLITEKMTEGLRKAAKNEIQDKKVDERRQVMSELLSGLPDPN 1057
Query: 78 YKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWPPSGQMSLQAIAPINAFTDFTL 137
L ++ L V ++ NKM NL+V P + P + + + + T+
Sbjct: 1058 RHTLVFILNHLRHVMEKKEFNKMDARNLSVCLAPVMQCAPPNLNDSRDLLDLKLYLK-TV 1116
Query: 138 ENQESI 143
E+ SI
Sbjct: 1117 EHYTSI 1122
>SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 873
Score = 41.5 bits (93), Expect = 3e-04
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 22 DPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQSWPNAEKPRNVKILILERLPIENYKLL 81
D + A LL+ + R+LE+P+ Y++ ++ +P E ++ LP +++
Sbjct: 518 DINAVAGLLRVYFRELEDPLFPSSHYQQFIEASRFPTNEDVIRQVTCVINELPDSVNRVM 577
Query: 82 KYLFQFL 88
KYLF+FL
Sbjct: 578 KYLFKFL 584
Score = 40.3 bits (90), Expect = 6e-04
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 90 KVKDRSCLNKMTCSNLAVVFGPNLAWPPSGQMSLQAIAPINAFTDFTLENQESIF 144
+V + S NKM NLAVVFGP L PS Q + + +N + ++N + +F
Sbjct: 637 RVSEHSEQNKMDAHNLAVVFGPTLLRIPSEQDMITYQSHVNGMMEVIIKNYDQVF 691
>SB_43370| Best HMM Match : RhoGAP (HMM E-Value=1.6e-18)
Length = 865
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 24 HIAAVLLKTFLRDLEEPVLTYDLYEEILKFQSWPNAEKPRNVKILILERLPIEN 77
H+ A +LK F R L PV T D+Y E+++ + + ++++LP N
Sbjct: 707 HVVAAVLKLFFRQLSSPVFTDDVYNEVIRTADLSDEREQLETLYALVQKLPPAN 760
>SB_19709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 83 YLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAW 115
YL FL K+ D S +NKMT SN+A+V PN+ +
Sbjct: 393 YLICFLGKLADYSEVNKMTASNIAIVIAPNIIY 425
Score = 32.3 bits (70), Expect = 0.16
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 19 FRDDPHIAAVLLKTFLRDLEEPVLTYDLYEE 49
F D H +LK +LR+L EP++T+ LY++
Sbjct: 300 FDCDVHAITGVLKQYLRELPEPLMTFALYDD 330
>SB_12853| Best HMM Match : RhoGAP (HMM E-Value=9.5e-13)
Length = 687
Score = 31.5 bits (68), Expect = 0.29
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
Query: 19 FRDDPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQSWPNAEKPRNVKILILERLPIENY 78
F D H A L FL L PV+ + Y++ L+ K LI + LP +
Sbjct: 556 FVDTIHSVAEALLIFLEALPVPVIPFGFYQKALEC-----CNNYILCKQLICQ-LPECHR 609
Query: 79 KLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWPPSGQMS 122
YL FL ++ S NK+ LA +FG L P + S
Sbjct: 610 NAFTYLTAFLRELLLSSTENKLDAKTLATLFGTLLLRAPKDEES 653
>SB_7782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 30.7 bits (66), Expect = 0.50
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 69 ILERLPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNL 113
++ +LP N+ +LKYL L +V + S N M NLA V P +
Sbjct: 459 LVMQLPKVNFAVLKYLMCHLNRVTEYSKENLMESRNLATVIFPTI 503
>SB_22677| Best HMM Match : RhoGAP (HMM E-Value=9.4e-13)
Length = 499
Score = 27.9 bits (59), Expect = 3.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 21 DDPHIAAVLLKTFLRDLEEPVLTYDLY 47
DD H A LK + R++ EP++ +D +
Sbjct: 409 DDVHALAGSLKLYFREMPEPLVPFDFF 435
>SB_55492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1303
Score = 27.5 bits (58), Expect = 4.7
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 97 LNKMTCSNLAVVFGPNLAWPPSGQMSLQAIAPINAFTDFTL 137
+N + + +A+ P LAW P GQ ++ +A ++A +D TL
Sbjct: 186 INVRSLNQVALQIVPVLAWGPKGQ--VKTVAVLDAGSDSTL 224
>SB_52960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 31 KTFLRDLEEPVLTYDLYEEILKFQS 55
KT R+ EEP L YDL+ I+ Q+
Sbjct: 78 KTKTRNFEEPRLVYDLFGNIILVQA 102
>SB_48713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 663
Score = 27.1 bits (57), Expect = 6.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 30 LKTFLRDLEEPVLTYDLYEEILK 52
LK +LR+L EPV+ +LY+ ++
Sbjct: 40 LKKYLRELPEPVIPSNLYQRFIE 62
>SB_47786| Best HMM Match : Ank (HMM E-Value=4.4e-30)
Length = 796
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 13 QGEPISFRDDPHIAAVLLKTFLRDLE--EPVLTYDLYEEILKFQSWP 57
+G + R+ P V++KTF + + + + LYE KF WP
Sbjct: 25 EGANVKLRNIPERDLVVVKTFACGVNYADICIRWGLYESAKKFVGWP 71
>SB_30338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 31 KTFLRDLEEPVLTYDLYEEILKFQS 55
KT R+ EEP L YDL+ I+ Q+
Sbjct: 94 KTKTRNFEEPRLVYDLFGNIILVQA 118
>SB_53578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 27.1 bits (57), Expect = 6.2
Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 70 LERLPIENYKLLKYLFQFLWKVKDRSCLN-KMTCSNLAVVFGPNL 113
+ LP N L L L KV C + KM SNLA VFGP L
Sbjct: 722 VSELPQANRDTLACLVVHLQKVSQ--CTDCKMPVSNLARVFGPTL 764
>SB_12754| Best HMM Match : Vicilin_N (HMM E-Value=0.49)
Length = 440
Score = 27.1 bits (57), Expect = 6.2
Identities = 17/80 (21%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 1 MVTVKQLQNSCNQGEPISFRDDPHI---AAVLLKTFLRDLEEPVLTYDLYEEILKFQSWP 57
++T+K++ N C + + I+++D + A++ + ++ ++E +EE+ K +
Sbjct: 40 VMTLKKIVNKCTEEKNITWKDCQGLRCQIALMSRQSMQTIKELQSELRRFEELCKERQHQ 99
Query: 58 NAEKPRNVKILILERLPIEN 77
E ++ L E+L EN
Sbjct: 100 LRESSSKIEKLTEEKLTAEN 119
>SB_33219| Best HMM Match : RhoGAP (HMM E-Value=0.0014)
Length = 399
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Query: 90 KVKDRSCLNKMTCSNLAVVFGPNL 113
+V S N M SNL VVFGP L
Sbjct: 96 RVAANSNKNLMAASNLGVVFGPTL 119
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.138 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,819,970
Number of Sequences: 59808
Number of extensions: 185089
Number of successful extensions: 545
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 503
Number of HSP's gapped (non-prelim): 37
length of query: 146
length of database: 16,821,457
effective HSP length: 76
effective length of query: 70
effective length of database: 12,276,049
effective search space: 859323430
effective search space used: 859323430
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 56 (26.6 bits)
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